| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243513
Identifier: 21243513
GI number: 21243513
Start: 3266478
End: 3268679
Strand: Direct
Name: 21243513
Synonym: XAC2786
Alternate gene names: NA
Gene position: 3266478-3268679 (Clockwise)
Preceding gene: 21243511
Following gene: 21243514
Centisome position: 63.11
GC content: 63.94
Gene sequence:
>2202_bases ATGAAGTCATCTGCATCCGTCGATCCGGCCAGCCGCAGTGCGAGGACGCACTCGCAAGAGATTCAGGAAACAGAGCTCGC CGTTCCCTCCACCTCTGCGGGGGTTACCCACCAATCCTCGCCTGATCCCGCACTCAGCCCACTTGGGCGCGCGCCCGTCA GGCGCAGTAGCGGAACCACGTTAGAGGCGCTGCTAGCCAGGCCCGAGCAAGACGCACAGGCCCTCGCTCCGCAACCGGTC ACGTCATCGAATGCAGCGACAGCGACGCTGGCACGGCTTCGTCGGCAGTTGGCCTCGGACAATGCACGCGCAATCGCACC GGAATTGGCGGCCGATCTGATCAGCAGGCTCAGGCCGATGAAATCGCCCGGCGCCACGGGTGCGCAGGCACGCGCGGCCA CGCATGCGGACCTGGTCAGCCGCATCAGCGAACACGATGTGATCGATTGGTACAAGGCGCAGGGGCTGAACGAAAACGAC GTGGCCACGCTGCGACGCACCGCGCTGCTCTCCGGCCTGCCCAACCCGAGCGGCAGCTTCCTCACCAATGCCATGCAGTA CATCGTCTCGCCGTGGATCAACTATGCGACACGCCAACCGTGGGCCGGTGCTGGGTTCGGCCTGGCGACCATGCTGGTCC CCGCACCTGTGAATGCCGGCCAACAATCGGCGGTTGTCAGCCTGTGCGAGTCGATTCGCGAACACGGCGCTCACGTCATC GTGCCGGACAAGAAGCAGATCAATGACAAGCACTGGCTCCCCGAACTGGCAAGCGCCCTCGAGGAAAAGATCGAAACGTT CGCCAACGCCTGCGACAGGTTTCGCGAGATTCAGCGTGACCCAAATTCCCCAAGTGACGCACGTGCGGCGGCAGCCGACG CCTTGCTGGCAGCAGAGAAGGACCTGCACCAGGCCCAGCATGATTTCGTCATGACCCAGGGCGCGCACGATCGCCAGTGG CAGGGCAACCGCTGGCAGGCCATTCCCCGCATCTTGCGTTCGCCGGTCGCCAGCACGCTGGGGCTGCTCAGCAAGACAGG CGCGATGCGTGCGCTGTCGCCGACGGCGCAGACCGTTGGCGCGATGTTGATGACCGCTGCGCAACATGTGGCCGCCGGCT TCGACGAGCAGGCCAAGCAGGAAGCCAACAACAAGCTCAACCTCCTGTACGCCGATGTCCTGACCCCCGCAGGCAAGCAG AAGCTGGCCAGCGGCACGGCGGTCAGCGCAGAAGACATCAAGGCCGACAAACTACGCAGCCTGATCCAGTCGCCCACCCA AGCCCTGGTCAAGCGCGTCACCGCCGGGGTCGCCGAGCTGGAGAAGCTGCTGGCGGATGCGGTGACAGCAGAGGATGCGC AGCACGGCGCAATCACGGCAGACGACCGCGACATCGAAGCCGGCGACGCCAGCAAGGCAATGCAGGACCTGCGCTTGCTG CGCAACGACCTTGAGGCTTTGCGTGAGGGCAGGCTCGACGAAATCGACCCGAACGGCACCGCATCCAAGCTGCTTGTCGG TGCCGAAAAATCCGTGCTGTCGCAGCAGCTGTTCAACGATATCGCCAAGAAATACAACTATCTTGAGTTCACCGCGCAAA CCGCACAGCGCATCGGCCAGATGTTCCATCTGGTCTTTTTGGGCAGCGCCGCATCCTCGGTGATCAGCAAACTCGTTTCG GCCGCCCAGGGCGGGACCCGCAATGTTCCGGTCGGGGAAAGCCTGGCGGTCTCGGCGATATCCGGGGGCATGGCCGCCGT TGGCGCCCTGAACCAGCACACCGCCATCACCATCAAGAACAACCGTCGCGAGGGAAGCACCGACATCGGGCTGCGGGAGC AGGTCAGCCGCGGAATCATGGGCGCCATGCTTGAAACGCTCTCCCAGCGCCGTGCGACCAAGGCCAGCAAGGCAATCAAC GCCTTGTTGGATGGCAATGATGTTGAAGCGCTGCTAGCAGCGGCAAGAGCGTTGCCTGCGCAGGAGGCAAGCGCCTCTTC CAGCCAGCCACAGGATTTACCATCGACATCCAGGGCGGCACCGCCGCGCCGGGAGCATGTTTCGGCCCCGAGTAGCCCGA ACCGATCGAGGCTGGGGCAGACGAGCAACGAGATAACGCGGTCCAAGAGTGCTCGGGACTTGGGGATGGAACTCCACCAG TTCGCCCGCATGGCCGGCAAACACGCCAAGGACTTGATGTGA
Upstream 100 bases:
>100_bases GGAGGTTCCACGGCATCTGCGATGCAATCCATGCGATGCGCACCAATCGTCTGGTACGCAAGCAATCTATCTGCCGTATA CACGTCAGGAGATATATCCA
Downstream 100 bases:
>100_bases GGTGATCATCCGGCATGTTGCGAAGGCTTTGCCTCCCTGCAACATGCCGGATGACGTGCCCCGAGCGCTGGACGAAGCCA TCGATCGGCAAAGCGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MKSSASVDPASRSARTHSQEIQETELAVPSTSAGVTHQSSPDPALSPLGRAPVRRSSGTTLEALLARPEQDAQALAPQPV TSSNAATATLARLRRQLASDNARAIAPELAADLISRLRPMKSPGATGAQARAATHADLVSRISEHDVIDWYKAQGLNEND VATLRRTALLSGLPNPSGSFLTNAMQYIVSPWINYATRQPWAGAGFGLATMLVPAPVNAGQQSAVVSLCESIREHGAHVI VPDKKQINDKHWLPELASALEEKIETFANACDRFREIQRDPNSPSDARAAAADALLAAEKDLHQAQHDFVMTQGAHDRQW QGNRWQAIPRILRSPVASTLGLLSKTGAMRALSPTAQTVGAMLMTAAQHVAAGFDEQAKQEANNKLNLLYADVLTPAGKQ KLASGTAVSAEDIKADKLRSLIQSPTQALVKRVTAGVAELEKLLADAVTAEDAQHGAITADDRDIEAGDASKAMQDLRLL RNDLEALREGRLDEIDPNGTASKLLVGAEKSVLSQQLFNDIAKKYNYLEFTAQTAQRIGQMFHLVFLGSAASSVISKLVS AAQGGTRNVPVGESLAVSAISGGMAAVGALNQHTAITIKNNRREGSTDIGLREQVSRGIMGAMLETLSQRRATKASKAIN ALLDGNDVEALLAAARALPAQEASASSSQPQDLPSTSRAAPPRREHVSAPSSPNRSRLGQTSNEITRSKSARDLGMELHQ FARMAGKHAKDLM
Sequences:
>Translated_733_residues MKSSASVDPASRSARTHSQEIQETELAVPSTSAGVTHQSSPDPALSPLGRAPVRRSSGTTLEALLARPEQDAQALAPQPV TSSNAATATLARLRRQLASDNARAIAPELAADLISRLRPMKSPGATGAQARAATHADLVSRISEHDVIDWYKAQGLNEND VATLRRTALLSGLPNPSGSFLTNAMQYIVSPWINYATRQPWAGAGFGLATMLVPAPVNAGQQSAVVSLCESIREHGAHVI VPDKKQINDKHWLPELASALEEKIETFANACDRFREIQRDPNSPSDARAAAADALLAAEKDLHQAQHDFVMTQGAHDRQW QGNRWQAIPRILRSPVASTLGLLSKTGAMRALSPTAQTVGAMLMTAAQHVAAGFDEQAKQEANNKLNLLYADVLTPAGKQ KLASGTAVSAEDIKADKLRSLIQSPTQALVKRVTAGVAELEKLLADAVTAEDAQHGAITADDRDIEAGDASKAMQDLRLL RNDLEALREGRLDEIDPNGTASKLLVGAEKSVLSQQLFNDIAKKYNYLEFTAQTAQRIGQMFHLVFLGSAASSVISKLVS AAQGGTRNVPVGESLAVSAISGGMAAVGALNQHTAITIKNNRREGSTDIGLREQVSRGIMGAMLETLSQRRATKASKAIN ALLDGNDVEALLAAARALPAQEASASSSQPQDLPSTSRAAPPRREHVSAPSSPNRSRLGQTSNEITRSKSARDLGMELHQ FARMAGKHAKDLM >Mature_733_residues MKSSASVDPASRSARTHSQEIQETELAVPSTSAGVTHQSSPDPALSPLGRAPVRRSSGTTLEALLARPEQDAQALAPQPV TSSNAATATLARLRRQLASDNARAIAPELAADLISRLRPMKSPGATGAQARAATHADLVSRISEHDVIDWYKAQGLNEND VATLRRTALLSGLPNPSGSFLTNAMQYIVSPWINYATRQPWAGAGFGLATMLVPAPVNAGQQSAVVSLCESIREHGAHVI VPDKKQINDKHWLPELASALEEKIETFANACDRFREIQRDPNSPSDARAAAADALLAAEKDLHQAQHDFVMTQGAHDRQW QGNRWQAIPRILRSPVASTLGLLSKTGAMRALSPTAQTVGAMLMTAAQHVAAGFDEQAKQEANNKLNLLYADVLTPAGKQ KLASGTAVSAEDIKADKLRSLIQSPTQALVKRVTAGVAELEKLLADAVTAEDAQHGAITADDRDIEAGDASKAMQDLRLL RNDLEALREGRLDEIDPNGTASKLLVGAEKSVLSQQLFNDIAKKYNYLEFTAQTAQRIGQMFHLVFLGSAASSVISKLVS AAQGGTRNVPVGESLAVSAISGGMAAVGALNQHTAITIKNNRREGSTDIGLREQVSRGIMGAMLETLSQRRATKASKAIN ALLDGNDVEALLAAARALPAQEASASSSQPQDLPSTSRAAPPRREHVSAPSSPNRSRLGQTSNEITRSKSARDLGMELHQ FARMAGKHAKDLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77933; Mature: 77933
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSASVDPASRSARTHSQEIQETELAVPSTSAGVTHQSSPDPALSPLGRAPVRRSSGTT CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH LEALLARPEQDAQALAPQPVTSSNAATATLARLRRQLASDNARAIAPELAADLISRLRPM HHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC KSPGATGAQARAATHADLVSRISEHDVIDWYKAQGLNENDVATLRRTALLSGLPNPSGSF CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHH LTNAMQYIVSPWINYATRQPWAGAGFGLATMLVPAPVNAGQQSAVVSLCESIREHGAHVI HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEE VPDKKQINDKHWLPELASALEEKIETFANACDRFREIQRDPNSPSDARAAAADALLAAEK ECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DLHQAQHDFVMTQGAHDRQWQGNRWQAIPRILRSPVASTLGLLSKTGAMRALSPTAQTVG HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHH AMLMTAAQHVAAGFDEQAKQEANNKLNLLYADVLTPAGKQKLASGTAVSAEDIKADKLRS HHHHHHHHHHHHCCCHHHHHHHCCCEEEEEHHHHCCCCHHHHHCCCCCCHHHHHHHHHHH LIQSPTQALVKRVTAGVAELEKLLADAVTAEDAQHGAITADDRDIEAGDASKAMQDLRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RNDLEALREGRLDEIDPNGTASKLLVGAEKSVLSQQLFNDIAKKYNYLEFTAQTAQRIGQ HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFHLVFLGSAASSVISKLVSAAQGGTRNVPVGESLAVSAISGGMAAVGALNQHTAITIKN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCEEEEEEC NRREGSTDIGLREQVSRGIMGAMLETLSQRRATKASKAINALLDGNDVEALLAAARALPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC QEASASSSQPQDLPSTSRAAPPRREHVSAPSSPNRSRLGQTSNEITRSKSARDLGMELHQ HHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH FARMAGKHAKDLM HHHHHHHHHHCCC >Mature Secondary Structure MKSSASVDPASRSARTHSQEIQETELAVPSTSAGVTHQSSPDPALSPLGRAPVRRSSGTT CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH LEALLARPEQDAQALAPQPVTSSNAATATLARLRRQLASDNARAIAPELAADLISRLRPM HHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC KSPGATGAQARAATHADLVSRISEHDVIDWYKAQGLNENDVATLRRTALLSGLPNPSGSF CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHH LTNAMQYIVSPWINYATRQPWAGAGFGLATMLVPAPVNAGQQSAVVSLCESIREHGAHVI HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEE VPDKKQINDKHWLPELASALEEKIETFANACDRFREIQRDPNSPSDARAAAADALLAAEK ECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DLHQAQHDFVMTQGAHDRQWQGNRWQAIPRILRSPVASTLGLLSKTGAMRALSPTAQTVG HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHH AMLMTAAQHVAAGFDEQAKQEANNKLNLLYADVLTPAGKQKLASGTAVSAEDIKADKLRS HHHHHHHHHHHHCCCHHHHHHHCCCEEEEEHHHHCCCCHHHHHCCCCCCHHHHHHHHHHH LIQSPTQALVKRVTAGVAELEKLLADAVTAEDAQHGAITADDRDIEAGDASKAMQDLRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RNDLEALREGRLDEIDPNGTASKLLVGAEKSVLSQQLFNDIAKKYNYLEFTAQTAQRIGQ HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFHLVFLGSAASSVISKLVSAAQGGTRNVPVGESLAVSAISGGMAAVGALNQHTAITIKN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCEEEEEEC NRREGSTDIGLREQVSRGIMGAMLETLSQRRATKASKAINALLDGNDVEALLAAARALPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC QEASASSSQPQDLPSTSRAAPPRREHVSAPSSPNRSRLGQTSNEITRSKSARDLGMELHQ HHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH FARMAGKHAKDLM HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA