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The map label for this gene is 21243475

Identifier: 21243475

GI number: 21243475

Start: 3219988

End: 3220749

Strand: Reverse

Name: 21243475

Synonym: XAC2748

Alternate gene names: NA

Gene position: 3220749-3219988 (Counterclockwise)

Preceding gene: 21243476

Following gene: 21243471

Centisome position: 62.23

GC content: 62.73

Gene sequence:

>762_bases
ATGCGGCCGTGTGGGGGCCTTCATAAGCCTGCCGTTATCATCGGCAGCATTCCGAAGGAAGCCACCATGCCTCAACTACC
GCCCATCACCAAAGCATTACTGATCGCCAACATCGGCTTGTTCCTGCTGCAATGGGCGGTGGGCGACCTGGGCGCCGGCG
TGTTGCCATCGGACAGCGTGTTGTCGTGGCTGATGTTGTGGCCGCTGTCCAACGGCTTCGATGCATTTTCGCCGGGCGCC
AGCTTCATGCCGTGGCAGCTGCTGACCTACGCGTTCCTGCATGGCGGCTTCAACCATCTGTTTTTCAACATGCTGGCGCT
TTTCATGTTTGGCGCGCCGTTGGAACAGACCTGGGGCCAGAAGCGCTTTCTGACCTACTACCTCGTGTGCGTGGCCGGCG
CCGGGCTGTGCCAGTTGTTGATGGCCTGGTTCACGCAAAGCGGTGCGCCGGTCGTGGGCGCATCGGGTGGCGTGTTCGGT
TTGCTGCTGGCGTACGGAATGCTGTTCCCCAATCAGCGCGTGATGCTGCTGTTCCCGCCGATTCCAATGAAGGCGCGGAC
CTTCGTGATCGTGTTCGGCGCAATCGAGTTATTGCTGGGGGCGACCGGTTGGCAGCCTGGCGTGGCCCACTTCGCGCATC
TGGGCGGCATGCTGTTCGGCTGGCTGATGATCCGCTACTGGCGCGGCCAGTCGCCATTCGGCGGCAGCGGCGGAAGGAAG
GGCGGTGGGAAGCGCAAGCCGCCGTTACGCGTGGTGCGTTGA

Upstream 100 bases:

>100_bases
GGCTCGGCAGGCTACCGGGAGCAATGCCAGCGCCTGCGCGCCGAGGGCGTCCAGGTGGAACGGGGCCGTGTGCGCCGGGC
CAGCGCCGCACAGCGGCTGG

Downstream 100 bases:

>100_bases
GTCGGGCAATGCTGCTTCGTTGCGCGTGATCCGTAGGAGCGGCCTTGGCCGCGATGGGCATCATCGGGAACACCTCATCG
CGGCCTGGGCCGCTCCTACA

Product: integral membrane protein

Products: NA

Alternate protein names: Transmembrane Rhomboid Family Protein; Peptidase; Integral Membrane Protein; Cytoplasmic Membrane Protein; Rhomboid-Like Protein; Serine Protease; Rhomboid Family Membrane Protein

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRPCGGLHKPAVIIGSIPKEATMPQLPPITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGA
SFMPWQLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAWFTQSGAPVVGASGGVFG
LLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELLLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQSPFGGSGGRK
GGGKRKPPLRVVR

Sequences:

>Translated_253_residues
MRPCGGLHKPAVIIGSIPKEATMPQLPPITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGA
SFMPWQLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAWFTQSGAPVVGASGGVFG
LLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELLLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQSPFGGSGGRK
GGGKRKPPLRVVR
>Mature_253_residues
MRPCGGLHKPAVIIGSIPKEATMPQLPPITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGA
SFMPWQLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAWFTQSGAPVVGASGGVFG
LLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELLLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQSPFGGSGGRK
GGGKRKPPLRVVR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27440; Mature: 27440

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPCGGLHKPAVIIGSIPKEATMPQLPPITKALLIANIGLFLLQWAVGDLGAGVLPSDSV
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQ
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCH
KRFLTYYLVCVAGAGLCQLLMAWFTQSGAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECC
IPMKARTFVIVFGAIELLLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQSPFGGSGGRK
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGGKRKPPLRVVR
CCCCCCCCCCCCC
>Mature Secondary Structure
MRPCGGLHKPAVIIGSIPKEATMPQLPPITKALLIANIGLFLLQWAVGDLGAGVLPSDSV
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQ
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCH
KRFLTYYLVCVAGAGLCQLLMAWFTQSGAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECC
IPMKARTFVIVFGAIELLLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQSPFGGSGGRK
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGGKRKPPLRVVR
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA