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The map label for this gene is nudK [H]

Identifier: 21243458

GI number: 21243458

Start: 3193958

End: 3194578

Strand: Reverse

Name: nudK [H]

Synonym: XAC2731

Alternate gene names: 21243458

Gene position: 3194578-3193958 (Counterclockwise)

Preceding gene: 77748671

Following gene: 21243456

Centisome position: 61.72

GC content: 59.74

Gene sequence:

>621_bases
TTGATTCCCTCTGCCACCGGCAACCCGCAGGTCCGCATTCGCAGCATCGATGTGCTCTCGGACAATTGGTATGTGCTACG
CAAGGTGACGTTCGATTTCCAGCGCAAGGACGGCCGCTGGCAGTCCTTGTCGCGCGAGGCCTACGACCGTGGCAATGGCG
CCACCATTTTGCTGTATAGCCGCGCCAGGCAGACGGTGATGCTCACCCGCCAGTTCCGCCTGCCGACGCTGCTCAATGGC
AACCCGGATGGCATGTTGATCGAAGCTTGCGCAGGCCTGCTCGACCAGGACGATGCGCTGACCTGCATCCGCAAGGAAAC
CGAAGAGGAAACCGGCTACCGGATCGACAACGTGCGCAAGGTGTTCGAGGCCTTCATGAGCCCTGGCTCGGTCACCGAAC
GCCTGTACTTCTTCGTCGGCGAATACTTCGACGCCGACAAGGTTGGTGATGGCGGTGGACTCGAAGAAGACGGCGAAGAG
ATCGAAGTGCTGGAGCTGTCCCTGGATGCAGCATTGGCGATGATCGGCACAGGTGAGATCGCCGATGCCAAGACCATCAT
GCTGTTGCAGTACGCAAAGTTGCATGGTGTGTTGGAGTCCATCCACGCCAACGCGCGATAG

Upstream 100 bases:

>100_bases
CGACAGGTAAAATGGTGGCCCGCCGCACTCTCGCGGTCCTACGAGCGACCGCGCGCCGCAACCGTGGCACTGCCATCGCT
CGCATCACAAGGAGTGTCGC

Downstream 100 bases:

>100_bases
CCCTTCAGGGCGACGGTGTCATCGAGACGTGTCGGCGGCGATGATCAAGCCGATCAACGCTTCCCACCAAAAATGCTACC
GAAGATGCCGCGCACGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQSLSREAYDRGNGATILLYSRARQTVMLTRQFRLPTLLNG
NPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRKVFEAFMSPGSVTERLYFFVGEYFDADKVGDGGGLEEDGEE
IEVLELSLDAALAMIGTGEIADAKTIMLLQYAKLHGVLESIHANAR

Sequences:

>Translated_206_residues
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQSLSREAYDRGNGATILLYSRARQTVMLTRQFRLPTLLNG
NPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRKVFEAFMSPGSVTERLYFFVGEYFDADKVGDGGGLEEDGEE
IEVLELSLDAALAMIGTGEIADAKTIMLLQYAKLHGVLESIHANAR
>Mature_206_residues
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQSLSREAYDRGNGATILLYSRARQTVMLTRQFRLPTLLNG
NPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRKVFEAFMSPGSVTERLYFFVGEYFDADKVGDGGGLEEDGEE
IEVLELSLDAALAMIGTGEIADAKTIMLLQYAKLHGVLESIHANAR

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI37594467, Length=181, Percent_Identity=29.8342541436464, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1788810, Length=184, Percent_Identity=54.3478260869565, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1789412, Length=196, Percent_Identity=27.0408163265306, Blast_Score=75, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24650557, Length=160, Percent_Identity=30.625, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23061; Mature: 23061

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQSLSREAYDRGNGATILLYS
CCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEE
RARQTVMLTRQFRLPTLLNGNPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRK
CCCCEEEEEHHCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
VFEAFMSPGSVTERLYFFVGEYFDADKVGDGGGLEEDGEEIEVLELSLDAALAMIGTGEI
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHEECCCCC
ADAKTIMLLQYAKLHGVLESIHANAR
CCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQSLSREAYDRGNGATILLYS
CCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEE
RARQTVMLTRQFRLPTLLNGNPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRK
CCCCEEEEEHHCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
VFEAFMSPGSVTERLYFFVGEYFDADKVGDGGGLEEDGEEIEVLELSLDAALAMIGTGEI
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHEECCCCC
ADAKTIMLLQYAKLHGVLESIHANAR
CCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA