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The map label for this gene is rimP

Identifier: 21243418

GI number: 21243418

Start: 3149523

End: 3150113

Strand: Reverse

Name: rimP

Synonym: XAC2689

Alternate gene names: 21243418

Gene position: 3150113-3149523 (Counterclockwise)

Preceding gene: 21243419

Following gene: 21243417

Centisome position: 60.87

GC content: 61.25

Gene sequence:

>591_bases
GTGAGCGAAAAAGCGACCGAAATCGCGAATCTGCTGAGTCCAACGGTTGAGTCCCTGGGCTTGGAACTGCTGGGCGTGGA
ATATCTTCCCGCTCCAGGCGGCGCCACTTTGCGCCTATATATCGATGTGCCGCTGGCCGAACAGCCCGAGCGTGTCATCA
ATGTCGACGACTGCGAGCGCGTGAGCCGTGAAGTCTCCGCTCAGCTCGACGTCGAAGACCCGATCAGCGGCAACTACACG
CTTGAAGTGTCATCTCCGGGTGTGGATCGTCCGCTGTTCACGCTTGAACAGTTCGCGCGCCACACCGGTGAGTCGGCAAA
GATCGTCTTGAAGCTGGCGCAGGATGGTCGGCGCCGCTTCCAGGGCCAGATCCTGCGCATCGATGCCGAGGCAGCTGCGG
TGGTGTTCGCCGTCGATGGCAAGGACGTGCAGATCGGCTACGACAATATCGACAAAGCGCGCATCGTGCCGGATTGGGTT
GCGCTGGGTCTGGCACCGCAGAAACCGAACAAGCCCGGCCCGAAAAAACCCGGGCACGAAAAGAAGAAACCATCCAACGA
GTCGGCGGCTGGCAAGCCGCGCGCGGAGTGA

Upstream 100 bases:

>100_bases
TCACGCAAGGGGCCCATCGGGCCCCTTGTTTTTTCCGGAACCGGAAAGTTTGCTGCCGGTTGCCGGGGTTCTACTGGCAA
TCATCTGATCAGGGCAGTCT

Downstream 100 bases:

>100_bases
CGAAATGAGCAAGGAACTTTTGCTGGTAGTGGATGCGGTCGCCAACGAGAAGGGCGTGCCGCGCGAGGTGATCTTCGAAG
CGATCGAGGCCGCACTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGNYT
LEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGQILRIDAEAAAVVFAVDGKDVQIGYDNIDKARIVPDWV
ALGLAPQKPNKPGPKKPGHEKKKPSNESAAGKPRAE

Sequences:

>Translated_196_residues
MSEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGNYT
LEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGQILRIDAEAAAVVFAVDGKDVQIGYDNIDKARIVPDWV
ALGLAPQKPNKPGPKKPGHEKKKPSNESAAGKPRAE
>Mature_195_residues
SEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGNYTL
EVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGQILRIDAEAAAVVFAVDGKDVQIGYDNIDKARIVPDWVA
LGLAPQKPNKPGPKKPGHEKKKPSNESAAGKPRAE

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=159, Percent_Identity=47.1698113207547, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_XANAC (Q8PJ53)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_643000.1
- ProteinModelPortal:   Q8PJ53
- SMR:   Q8PJ53
- GeneID:   1156760
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC2689
- NMPDR:   fig|190486.1.peg.2644
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- ProtClustDB:   PRK00092
- BioCyc:   XAXO190486:XAC2689-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 21258; Mature: 21127

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCER
CCHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHHH
VSREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRF
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHH
QGQILRIDAEAAAVVFAVDGKDVQIGYDNIDKARIVPDWVALGLAPQKPNKPGPKKPGHE
CCEEEEEECCCEEEEEEECCCEEEECCCCCCCCEECCHHHHCCCCCCCCCCCCCCCCCCC
KKKPSNESAAGKPRAE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCER
CHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHHH
VSREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRF
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHH
QGQILRIDAEAAAVVFAVDGKDVQIGYDNIDKARIVPDWVALGLAPQKPNKPGPKKPGHE
CCEEEEEECCCEEEEEEECCCEEEECCCCCCCCEECCHHHHCCCCCCCCCCCCCCCCCCC
KKKPSNESAAGKPRAE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217