| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gumF
Identifier: 21243313
GI number: 21243313
Start: 3041149
End: 3042240
Strand: Reverse
Name: gumF
Synonym: XAC2581
Alternate gene names: NA
Gene position: 3042240-3041149 (Counterclockwise)
Preceding gene: 21243314
Following gene: 21243312
Centisome position: 58.78
GC content: 62.18
Gene sequence:
>1092_bases ATGAGCGTGTCGGCAATGCCGGCATCGCCGTCGGCTTTGCCCGCCGCCAACGCACGGGTTGCAACCAGCGGTCGCGTCCG CGACCCGCGCATCGATGCCACCAAGGCCATTGCGATCTTGCTGGTGGTGTTCTGTCATGCAAAGGGCGTCCCACATGGCA TGACCTTGTTCGCCTACAGTTTCCACGTGCCGCTGTTTTTCTTGGTATCCGGTTGGCTGGCTGCCGGTTATGCGTCGCGC AATACCGGCTTGACGCAGACGATCAGCAAGCAGGCACGTAGCCTGCTGCTGCCATACGTCACCTTTTATCTGTTGGGCTA TGCCTACTGGTTGCTGACCCGCAATATCGGCGAAAAGGCTGCGCGCTGGGGAAGTCACCCGTGGTGGGAGCCCATCGTGG CGATGTTCACCGGTATCGGCCCGGACCTGTACGTGCAACCTCCGCTGTGGTTTCTGCCGGTCATGTTGGCGACCGTGGTG AGTTACCTGGTCTTGCGCCGCCTGATGTCGCCGATCCTGATCGCAGGGCTGGCATTGATCGTGGCATGGTTCTGGATGAA CTGGTTCCCGGCCCAGTACGTGCGGATTTTTTTCGGTTTGGACGTGCTACCGGTGTCGCTGTGCTTTTACGCATTGGGCG CCTTGCTGATCTACCTTTCGCCACGCCTGCCGACATCCTTGGCCGGCAGCGCCCTGGCAACGGTCGTGTTGGCATTGGCG GTGGCCTGGCTGGCCGTCGCCAATGGGCGAATCGACGTCAACATGCTCGAATTCGGACACGATCACGCGCTGTTCCTGGT TAGCGCGTTGCTTGGTTCGTTGATGGTGATCTGCGCGGCGCGGCTGGTACAGAGCTGGGCGTGGCTGCAGTGGATCGGCC GCAACACCTTGCTGATTCTCTGTACGCATATGTTGGTGTTCTTCGTGCTGTCCGGTGTTGCGGCCTTGGCTGGTGGATTC GGCGGCGCGCGTCCGGGGCTTGGTTGGGCGGTCTTCGTCACGCTGTTCGCATTGGCCGCCAGCGTGCCGCTGCGTTGGAT CCTGATGCGCTTCGCCCCGTGGGCGCTGGGTGCGCGCCCGGTGGCGGCATGA
Upstream 100 bases:
>100_bases TGCTGCCGACCTGGTCTGCGTCCGGCACGCAGGCTGTCTTGATCAAGGACGATCCAACGGCAGATGGCGCGCAGTTGCCA TTGCCTGCGGGAGCGGCACG
Downstream 100 bases:
>100_bases GCGGCGTTTTGGCATGACAAGCGGATTCTCTTCACTACACGACATGCGTGCGCATCACCTCACGGACGCCAACACGGCGC CTGCGCTGACGCGCGATTGG
Product: GumF protein
Products: NA
Alternate protein names: GumG Protein; O-Actetyl Transferase Related Protein; Acetyltransferase; Xanthan Biosynthesis Acetyltransferase GumF; Acyltransferase; Xanthan Biosynthesis Acetyltransferase GumG
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSVSAMPASPSALPAANARVATSGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYSFHVPLFFLVSGWLAAGYASR NTGLTQTISKQARSLLLPYVTFYLLGYAYWLLTRNIGEKAARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLATVV SYLVLRRLMSPILIAGLALIVAWFWMNWFPAQYVRIFFGLDVLPVSLCFYALGALLIYLSPRLPTSLAGSALATVVLALA VAWLAVANGRIDVNMLEFGHDHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLILCTHMLVFFVLSGVAALAGGF GGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGARPVAA
Sequences:
>Translated_363_residues MSVSAMPASPSALPAANARVATSGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYSFHVPLFFLVSGWLAAGYASR NTGLTQTISKQARSLLLPYVTFYLLGYAYWLLTRNIGEKAARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLATVV SYLVLRRLMSPILIAGLALIVAWFWMNWFPAQYVRIFFGLDVLPVSLCFYALGALLIYLSPRLPTSLAGSALATVVLALA VAWLAVANGRIDVNMLEFGHDHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLILCTHMLVFFVLSGVAALAGGF GGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGARPVAA >Mature_362_residues SVSAMPASPSALPAANARVATSGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYSFHVPLFFLVSGWLAAGYASRN TGLTQTISKQARSLLLPYVTFYLLGYAYWLLTRNIGEKAARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLATVVS YLVLRRLMSPILIAGLALIVAWFWMNWFPAQYVRIFFGLDVLPVSLCFYALGALLIYLSPRLPTSLAGSALATVVLALAV AWLAVANGRIDVNMLEFGHDHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLILCTHMLVFFVLSGVAALAGGFG GARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGARPVAA
Specific function: Unknown
COG id: COG3594
COG function: function code G; Fucose 4-O-acetylase and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39559; Mature: 39427
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSAMPASPSALPAANARVATSGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYS CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHVPLFFLVSGWLAAGYASRNTGLTQTISKQARSLLLPYVTFYLLGYAYWLLTRNIGEKA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLATVVSYLVLRRLMSPILIAGLALI HHCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAWFWMNWFPAQYVRIFFGLDVLPVSLCFYALGALLIYLSPRLPTSLAGSALATVVLALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAWLAVANGRIDVNMLEFGHDHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLIL HHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH CTHMLVFFVLSGVAALAGGFGGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGARP HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAA CCC >Mature Secondary Structure SVSAMPASPSALPAANARVATSGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYS CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHVPLFFLVSGWLAAGYASRNTGLTQTISKQARSLLLPYVTFYLLGYAYWLLTRNIGEKA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLATVVSYLVLRRLMSPILIAGLALI HHCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAWFWMNWFPAQYVRIFFGLDVLPVSLCFYALGALLIYLSPRLPTSLAGSALATVVLALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAWLAVANGRIDVNMLEFGHDHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLIL HHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH CTHMLVFFVLSGVAALAGGFGGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGARP HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA