| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yggX [C]
Identifier: 21243287
GI number: 21243287
Start: 3013544
End: 3013819
Strand: Direct
Name: yggX [C]
Synonym: XAC2554
Alternate gene names: 21243287
Gene position: 3013544-3013819 (Clockwise)
Preceding gene: 21243286
Following gene: 21243290
Centisome position: 58.23
GC content: 62.68
Gene sequence:
>276_bases ATGTCCCGCACCGTGTTCTGCCACTACCAGCAAAGCGACGCCGAAGGCCTGGATTTCGTGCCGTATCCGGGCGAGCTCGG CCAGCGCATTTTCGCGCAGATCGGCAAGAACGCCTGGCAAGCGTGGTTGGCGCACCAGACCATGCTGATCAACGAAAACC GGCTGTCGCCGCGCGACCCCAAGCACCGCGCCTTTCTCGAAGCCGAGCTGCAGAAGTTCCTGTTCGAGCGCAATGCCGAC AAACCCGAAGGCTATGTGGCGCCGGTGGGTGACTGA
Upstream 100 bases:
>100_bases TACGCTGGGTAGCACCTGCCGATCTTGCATCGCTAGGCCTGCCGGCGCCGATCCGCAAGTTGCTCGACGCGTTGTAAGCG CGTCTTCCAAAGGAATCCGC
Downstream 100 bases:
>100_bases GCGCGCGGATGTGGGATTGCGGAGTCGTGAGTTGCACCAGTAGTGGCAGCCTTTGCTGCATCCAATGCGTCTGAGAAGTA ATGGGGTGGCTGCATCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSRTVFCHYQQSDAEGLDFVPYPGELGQRIFAQIGKNAWQAWLAHQTMLINENRLSPRDPKHRAFLEAELQKFLFERNAD KPEGYVAPVGD
Sequences:
>Translated_91_residues MSRTVFCHYQQSDAEGLDFVPYPGELGQRIFAQIGKNAWQAWLAHQTMLINENRLSPRDPKHRAFLEAELQKFLFERNAD KPEGYVAPVGD >Mature_90_residues SRTVFCHYQQSDAEGLDFVPYPGELGQRIFAQIGKNAWQAWLAHQTMLINENRLSPRDPKHRAFLEAELQKFLFERNADK PEGYVAPVGD
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes [H]
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family [H]
Homologues:
Organism=Escherichia coli, GI1789332, Length=86, Percent_Identity=52.3255813953488, Blast_Score=96, Evalue=4e-22,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007457 - ProDom: PD029191 [H]
Pfam domain/function: PF04362 Iron_traffic [H]
EC number: NA
Molecular weight: Translated: 10492; Mature: 10361
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTVFCHYQQSDAEGLDFVPYPGELGQRIFAQIGKNAWQAWLAHQTMLINENRLSPRDP CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC KHRAFLEAELQKFLFERNADKPEGYVAPVGD HHHHHHHHHHHHHHHHCCCCCCCCEEECCCC >Mature Secondary Structure SRTVFCHYQQSDAEGLDFVPYPGELGQRIFAQIGKNAWQAWLAHQTMLINENRLSPRDP CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC KHRAFLEAELQKFLFERNADKPEGYVAPVGD HHHHHHHHHHHHHHHHCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA