| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is yveA [H]
Identifier: 21243275
GI number: 21243275
Start: 2996252
End: 2997838
Strand: Reverse
Name: yveA [H]
Synonym: XAC2542
Alternate gene names: 21243275
Gene position: 2997838-2996252 (Counterclockwise)
Preceding gene: 21243276
Following gene: 21243274
Centisome position: 57.92
GC content: 64.65
Gene sequence:
>1587_bases ATGACCACACACGCTGCGACCACGCAAGGCAAGTTCCACAAGCGCCTCAGCCTGACCGACCTGACCTTTATCGGGCTGGG TTCGATCTTCGGTTCCGGGTGGTTGTTTTCGGCCAGCCACGTCTCATCGATCGCGGGGCCGGCCGGCATCGTGTCGTGGA TCCTCGGTGGGATCGCGGTGCTGCTGCTTGGGCTGGTGTATTGCGAACTCGGCGCGGCATTGCCGCGCGCCGGCGGGGTG GTGCGCTACCCGGAATATTCGCATGGCGCCTTGCTCGGTTCGCTGACCGGCTTCATCACCTTGATCGCGTTCTCCAGCCT GATCGCGATCGAAGTGGAAGCGGCGCGGCAATACGCAGCGGCGTGGTTCCCGTGGTTGAGCCAGCCGAACAGCACCCATC CCAGCGTCGTGGGTTGGCTGGTGCAGCTGGCCTTGCTGGTGCTGTTCTTCGTACTCAACTATTTCAGCGTCAAGACCTTT GCGCTGGCCAATAACATCGTCAGCATCTTCAAGTTCCTGGTGCCGATCCTGGTGATCGTGCTGCTGATGCAGCACTTCGA TGCCGGCAATCTGAGCGTGCATGGGTTCGCGCCATCGGGCATGGCGGGCGTGGAGGCGGCGATCTCGGCCGGCGGCATCA TCTTCGCGTATCTGGGGTTGACCCCGATCGTGTCGGTGGCCAGTGAGGTGCGCGACCTGCAGCGCAATATTCCAATTGCG CTGATCCTGTCGGTGGCGCTGTCCACGGCGATTTACGTGCTGCTGCAGCTGGCGTTCCTGGGCAGCATCCCGGCCGCGCA ACTCGCGCAAGGCTGGGCGGGCATCGACAAGGCCTTCTCGCTGCCGTACCACGACATCGCCCTGGCCTTGGGCATGGCGT GGCTGGCCGCGCTGGTGATCTGCGATGCGATGGTGTCGCCCAGCGGCACCGGCAACATCTACATGAATGCCACGCCGCGC GTGGTGTATGGCTGGGCACGCAGTGGCGGGTTCTTGCCGGTGCTGACGCGGGTGGATCCGGCGTCGGGCATCCCGCGTCC GGCACTGTGGTTGAGCCTGGGCTTGTCGATCTTCTGGACGCTGCCGTTTCCCTCCTGGGAAACGCTGATCGGCGTGGTGT CGGCCGCCTTGGTGCTGAGCTATGCGGTGGCGCCGATCACGGTGGCGGCTCTGCGCCGCAGCGCGCCGGACTTGCCGCGC CCATTTTTCGTGCGTGGCCTGCCGGTATTTGGGCCGCTGTCGTTCATGGTGGCGGCGTTGATCGTGTACTGGTCCACCTG GCCGACCTTGTCGTGGTTGCTCGGCTTGCAGGTGCTGGCGTTCGTGCTGTACGTGCTATTGCGCCTGCCTTCGCGCCAGG GCCGCGCGCGCCTGGTGCGGCAGGTGCGCGCGTCGTTGTGGCTGATCGTGTTCTTCGTGCTGGTGATGCTGGTGTCGTGG GCGGGTACGTTCGGCGGACATGGCTGGATTGCGCATCCCTTCGATACGTTGGGCGTGGCGGTCATCGCGTTGTGCATTTA TCACTGGGGCGCACGCAGCGGTTTGCGCAGCGACGAGCTTGCGCTGGAGGAGGACGATGGTGAGTGA
Upstream 100 bases:
>100_bases AGGCATCGGCAGAGGCGAAGGCCTCCGCCAGCGACTGACACGTGCGCGCACGTGATGGCTTTAAGAGCAGTACCGCGCTT TCCACATTTCGGGGCGACGT
Downstream 100 bases:
>100_bases TGCGCGCCGCAGCGCATTTGGTTTACGTCGGTGGTCTGCGTTGGTCGCCTACGGATTGGTGTTGTCGGGTGCTGTGCAGG CTGCGCCCAGCGTTGCCGAT
Product: amino acid permease
Products: D-glycine [Cytoplasm]; D-alanine [Cytoplasm]; Proton [Cytoplasm]; D-serine [Cytoplasm] [C]
Alternate protein names: L-aspartate transporter [H]
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MTTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAVLLLGLVYCELGAALPRAGGV VRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAAAWFPWLSQPNSTHPSVVGWLVQLALLVLFFVLNYFSVKTF ALANNIVSIFKFLVPILVIVLLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDLQRNIPIA LILSVALSTAIYVLLQLAFLGSIPAAQLAQGWAGIDKAFSLPYHDIALALGMAWLAALVICDAMVSPSGTGNIYMNATPR VVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWTLPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPR PFFVRGLPVFGPLSFMVAALIVYWSTWPTLSWLLGLQVLAFVLYVLLRLPSRQGRARLVRQVRASLWLIVFFVLVMLVSW AGTFGGHGWIAHPFDTLGVAVIALCIYHWGARSGLRSDELALEEDDGE
Sequences:
>Translated_528_residues MTTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAVLLLGLVYCELGAALPRAGGV VRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAAAWFPWLSQPNSTHPSVVGWLVQLALLVLFFVLNYFSVKTF ALANNIVSIFKFLVPILVIVLLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDLQRNIPIA LILSVALSTAIYVLLQLAFLGSIPAAQLAQGWAGIDKAFSLPYHDIALALGMAWLAALVICDAMVSPSGTGNIYMNATPR VVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWTLPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPR PFFVRGLPVFGPLSFMVAALIVYWSTWPTLSWLLGLQVLAFVLYVLLRLPSRQGRARLVRQVRASLWLIVFFVLVMLVSW AGTFGGHGWIAHPFDTLGVAVIALCIYHWGARSGLRSDELALEEDDGE >Mature_527_residues TTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAVLLLGLVYCELGAALPRAGGVV RYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAAAWFPWLSQPNSTHPSVVGWLVQLALLVLFFVLNYFSVKTFA LANNIVSIFKFLVPILVIVLLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDLQRNIPIAL ILSVALSTAIYVLLQLAFLGSIPAAQLAQGWAGIDKAFSLPYHDIALALGMAWLAALVICDAMVSPSGTGNIYMNATPRV VYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWTLPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPRP FFVRGLPVFGPLSFMVAALIVYWSTWPTLSWLLGLQVLAFVLYVLLRLPSRQGRARLVRQVRASLWLIVFFVLVMLVSWA GTFGGHGWIAHPFDTLGVAVIALCIYHWGARSGLRSDELALEEDDGE
Specific function: Uptake of L-aspartate with the concomitant import of a proton. Can also transport aspartate hydroxamate and L-glutamate with lower affinity and efficiency [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=437, Percent_Identity=24.7139588100687, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI7657591, Length=437, Percent_Identity=24.7139588100687, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI4507047, Length=435, Percent_Identity=23.2183908045977, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI33286428, Length=404, Percent_Identity=25, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI110347453, Length=353, Percent_Identity=25.4957507082153, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI186910308, Length=472, Percent_Identity=23.728813559322, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI186910306, Length=472, Percent_Identity=23.728813559322, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI186910304, Length=472, Percent_Identity=23.728813559322, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI258614005, Length=434, Percent_Identity=21.889400921659, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI258614003, Length=434, Percent_Identity=21.889400921659, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI71979932, Length=425, Percent_Identity=24.9411764705882, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI258645169, Length=380, Percent_Identity=22.3684210526316, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1790653, Length=384, Percent_Identity=23.6979166666667, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788480, Length=361, Percent_Identity=24.6537396121884, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17532491, Length=415, Percent_Identity=26.2650602409639, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17540018, Length=410, Percent_Identity=25.1219512195122, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17531343, Length=454, Percent_Identity=25.7709251101322, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24667468, Length=405, Percent_Identity=25.1851851851852, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI24668806, Length=438, Percent_Identity=21.689497716895, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI21356285, Length=438, Percent_Identity=21.689497716895, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24668802, Length=438, Percent_Identity=21.689497716895, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24651635, Length=413, Percent_Identity=23.9709443099274, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24651633, Length=413, Percent_Identity=23.9709443099274, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI221512776, Length=425, Percent_Identity=22.3529411764706, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24666159, Length=425, Percent_Identity=22.3529411764706, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI45550968, Length=418, Percent_Identity=24.8803827751196, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI19921172, Length=418, Percent_Identity=24.8803827751196, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357367, Length=419, Percent_Identity=23.6276849642005, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641993, Length=397, Percent_Identity=24.6851385390428, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI24641995, Length=397, Percent_Identity=24.6851385390428, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI221331183, Length=367, Percent_Identity=24.2506811989101, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI17647653, Length=367, Percent_Identity=24.2506811989101, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24664379, Length=367, Percent_Identity=24.2506811989101, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 56580; Mature: 56449
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAV CCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHH LLLGLVYCELGAALPRAGGVVRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAA HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWFPWLSQPNSTHPSVVGWLVQLALLVLFFVLNYFSVKTFALANNIVSIFKFLVPILVIV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDLQRNIPIA HHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH LILSVALSTAIYVLLQLAFLGSIPAAQLAQGWAGIDKAFSLPYHDIALALGMAWLAALVI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHH CDAMVSPSGTGNIYMNATPRVVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWT HHHHCCCCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHEEE LPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPRPFFVRGLPVFGPLSFMVAAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHH IVYWSTWPTLSWLLGLQVLAFVLYVLLRLPSRQGRARLVRQVRASLWLIVFFVLVMLVSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTFGGHGWIAHPFDTLGVAVIALCIYHWGARSGLRSDELALEEDDGE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAV CCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHH LLLGLVYCELGAALPRAGGVVRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAA HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWFPWLSQPNSTHPSVVGWLVQLALLVLFFVLNYFSVKTFALANNIVSIFKFLVPILVIV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDLQRNIPIA HHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH LILSVALSTAIYVLLQLAFLGSIPAAQLAQGWAGIDKAFSLPYHDIALALGMAWLAALVI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHH CDAMVSPSGTGNIYMNATPRVVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWT HHHHCCCCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHEEE LPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPRPFFVRGLPVFGPLSFMVAAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHH IVYWSTWPTLSWLLGLQVLAFVLYVLLRLPSRQGRARLVRQVRASLWLIVFFVLVMLVSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTFGGHGWIAHPFDTLGVAVIALCIYHWGARSGLRSDELALEEDDGE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glycine [Periplasm]; D-alanine [Periplasm]; Proton [Periplasm]; D-serine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + D-glycine [Periplasm] = Proton [Cytoplasm] + D-glycine [Cytoplasm] Proton [Periplasm] + D-alanine [Periplasm] = Proton [Cytoplasm] + D-alanine [Cytoplasm] Proton [Periplasm] + D-serine [Periplasm] = Proton [Cytoplasm] + D-serine [Cyto
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 12730183 [H]