| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243269
Identifier: 21243269
GI number: 21243269
Start: 2986186
End: 2988543
Strand: Reverse
Name: 21243269
Synonym: XAC2536
Alternate gene names: NA
Gene position: 2988543-2986186 (Counterclockwise)
Preceding gene: 21243272
Following gene: 21243268
Centisome position: 57.74
GC content: 66.96
Gene sequence:
>2358_bases ATGGACCGTAGAACCTTTCTGCGTCAGGGCATGGCGGCCACCGCGGCGGTCGGTGCAGGTGCCGCGCTGGCAACGCCGGC CGCGGCGTCGGCTGCGAGCACGCTGCCGGCGCCGACACTGCCCCGCCTGGAACCGCTGCCTTCGGCCGCGCATGTCGGTA GCACGCTGTGCAGCTTCACCCACCTGCAGCAGCATTGGACCGTCTACGAACATCTGGACGATGCGCAAGGCCAGCTCACG TTGTGGAGCGACAGCGGCATGCTGCGGCTGGACAAGCGCACCGAGCCGGTCTATCCGGCCGCGGGCACGCCGTACTTCGG GCTGCCGCTGGCGCAGGTGGCCATGGCCGAAGCCGACCTGCTGGCCGACCGCCTGCTGCGCGACGGCGACCCGGACGAGG CGCAGGTGCGCGACGTGGCGCCGCCGGCGGCCTCCTTGCTCGACCCCAAGGACAATGGCGGGCGCTGGCCGTGGACCACC TTTGTCGGAACACGCGAAAGCCTGGACACCATGCCCATCCTGCCCAACGGCCGCAGCCGCACCTCGCGGCCGGAGCACGC GTTCAGGGAGTTGGGCGAAGAGGCGCTGATCAAACGCCGCGAAGAAGGCATGCTCGGCGGCTGGATGCCCGCGGTGCGCA AGGTGATGCGCCGCGAGGGCGAGCCCGACAGCTGGTACGACGTACTGGTGTTTGCCGACGTGCGGGCACGCGATCGCTTT GTGGTGCAAACCTGGCACCGCACGATGCAGGTCAAGGCCGGCGCCGTCGTCGCGGTGCACTACACCCACAGCTACCCCGA ATTTGCGCCCTCCCGCAGCGCCGCCACCGCCGAACAGTTCTACGCGGCACTGATCGATTTCGCTGCGTATTGGCAGCAGG CGCTGGACGGCACCGTGCAGGCGCAGTTTCCCGATGCCAGTTGGAACGACATGGTGCAGTTCGCGTTCGCGCGCGAGCTG GTGGTGCGCCCCGGCGGCGATTACCCGAAGTATGGCGCGGTGGAACGCGACTACTACGGCAACGAATACGACGGTTTCCA GGACACGTTTACCAGCTCGTTCTACGCCAACCTGGAGTGGGGACGTTTTGCACAAGCTGCGGCGGTGCTCGACAACTACT TCGACGCGTTCGTGCAGGACGATGGCCTGCCGAACATGCGCGGGCCGGAAGTCGGGCAGTTCGGGCTCACCTTGTCGTTG CTGGCGCGGTATCTGCGCTACACCGGCGATGCGCCACGGCTGCGCCGCGTGCTGCCCAAGATCGTCGCCACCGCGCAGGT GTTGTGCGCGTTGCACGACCAGGCGCTGGCACTGCCGCGCACGGCGCATGGCCATGGGTTGCTGCACGGCTGGAACGAAT CCGATGCCTGCCTGTTTCCCGATCCTTCGCTATGGTGGAAACCGTATTACGCCAACAGCGCGCTGACCATCCGCGGCTGG GAAGATATCGCACAGGTGTGGAGCACGCTCGGTGGCGATGCGGGCCAGGCCACGCAATGGCAACGCCGCGCCACGCAACT GCGTGCGCGACTGGAAGCCAGCCTGCGTACCAACGTGCGTCGCGACCTCTCGCCGCCATACGTGGGCCCGTTGCCCGGCA CCACATTGACCTTTCGCCAATCGTTGCTGCAGGAAAAGCCCAGCGAACAGCAATGGCCGCACCGTGCATATGCCGAACTG CTGCAGGCCGATGTGTTGCCGCACGACCTGGCCCACTTGGTGATCGATTGCCTGCGTGGCCATGGCGGCACCAGCATTGG CGTGGTGGCCAACATCGCACCGCCGGAGCCGGGCAGCCGCGATCTGCTCGGTTTCATTTCCTATGGCTATGCGCAACAGT TGTTGCGGCTGGATCGCATCGAAGAATATCTGTTGTTCGTCTACGCGCATCGTTATCAGGTGCACACGCGCGGCAGTTGG ACGGCTGGGGAAGTCAGCGGCATCACCGGCGGCATGCCGTTGTTCTGCATACCGGCACAGATGACCATCCCCTTGCTGCT GCGCTGGATGCTGGTCAGCGACGACAGCGCCGGCGAGCAGTTGTTTCTCGCGCGTGCGGTACCGCGCGCCTGGCTGGGCA GCGGTGCACCGGTGGGCATCAGCGCGGCCCCAACGCGATGGGGCACGGTCGCCTTGACGCTGCGCACCGACACGGTGGCG CGTTGCATCAATGCCGATGTTCAGTTGCCGGAGCGCGCGCCCGCCCGCACCTGGCTCACCCTGCGTGCACCCGCAGGCAC TCGCCTGCAGCGCGTGCTGGTCGATGGCAAACCGGCGAAAGCGCAGGGGCCGCATACAGATCGCGTGGCCTTGCCGGGCG CAGCTGCACTGGTGAAGGTGCAGGCGTGGTACGCCTGA
Upstream 100 bases:
>100_bases GTCGAGATGTGCAGATTTCCGCACGGGTGTCTGACCGCTGTCACAAGACGTCGTGCATGAACGCGCGCACGATGGGCCAC GATCATTCGAGGGAGCAACG
Downstream 100 bases:
>100_bases CAACGGCGCCGCGATGATCGAGCGCCGCCGTTGCTGCAGTGTTGCCGGACATCGCGCACCGCAGTGCCGCCTTGCTGTTC GCATGCAGGTGCTGTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 785; Mature: 785
Protein sequence:
>785_residues MDRRTFLRQGMAATAAVGAGAALATPAAASAASTLPAPTLPRLEPLPSAAHVGSTLCSFTHLQQHWTVYEHLDDAQGQLT LWSDSGMLRLDKRTEPVYPAAGTPYFGLPLAQVAMAEADLLADRLLRDGDPDEAQVRDVAPPAASLLDPKDNGGRWPWTT FVGTRESLDTMPILPNGRSRTSRPEHAFRELGEEALIKRREEGMLGGWMPAVRKVMRREGEPDSWYDVLVFADVRARDRF VVQTWHRTMQVKAGAVVAVHYTHSYPEFAPSRSAATAEQFYAALIDFAAYWQQALDGTVQAQFPDASWNDMVQFAFAREL VVRPGGDYPKYGAVERDYYGNEYDGFQDTFTSSFYANLEWGRFAQAAAVLDNYFDAFVQDDGLPNMRGPEVGQFGLTLSL LARYLRYTGDAPRLRRVLPKIVATAQVLCALHDQALALPRTAHGHGLLHGWNESDACLFPDPSLWWKPYYANSALTIRGW EDIAQVWSTLGGDAGQATQWQRRATQLRARLEASLRTNVRRDLSPPYVGPLPGTTLTFRQSLLQEKPSEQQWPHRAYAEL LQADVLPHDLAHLVIDCLRGHGGTSIGVVANIAPPEPGSRDLLGFISYGYAQQLLRLDRIEEYLLFVYAHRYQVHTRGSW TAGEVSGITGGMPLFCIPAQMTIPLLLRWMLVSDDSAGEQLFLARAVPRAWLGSGAPVGISAAPTRWGTVALTLRTDTVA RCINADVQLPERAPARTWLTLRAPAGTRLQRVLVDGKPAKAQGPHTDRVALPGAAALVKVQAWYA
Sequences:
>Translated_785_residues MDRRTFLRQGMAATAAVGAGAALATPAAASAASTLPAPTLPRLEPLPSAAHVGSTLCSFTHLQQHWTVYEHLDDAQGQLT LWSDSGMLRLDKRTEPVYPAAGTPYFGLPLAQVAMAEADLLADRLLRDGDPDEAQVRDVAPPAASLLDPKDNGGRWPWTT FVGTRESLDTMPILPNGRSRTSRPEHAFRELGEEALIKRREEGMLGGWMPAVRKVMRREGEPDSWYDVLVFADVRARDRF VVQTWHRTMQVKAGAVVAVHYTHSYPEFAPSRSAATAEQFYAALIDFAAYWQQALDGTVQAQFPDASWNDMVQFAFAREL VVRPGGDYPKYGAVERDYYGNEYDGFQDTFTSSFYANLEWGRFAQAAAVLDNYFDAFVQDDGLPNMRGPEVGQFGLTLSL LARYLRYTGDAPRLRRVLPKIVATAQVLCALHDQALALPRTAHGHGLLHGWNESDACLFPDPSLWWKPYYANSALTIRGW EDIAQVWSTLGGDAGQATQWQRRATQLRARLEASLRTNVRRDLSPPYVGPLPGTTLTFRQSLLQEKPSEQQWPHRAYAEL LQADVLPHDLAHLVIDCLRGHGGTSIGVVANIAPPEPGSRDLLGFISYGYAQQLLRLDRIEEYLLFVYAHRYQVHTRGSW TAGEVSGITGGMPLFCIPAQMTIPLLLRWMLVSDDSAGEQLFLARAVPRAWLGSGAPVGISAAPTRWGTVALTLRTDTVA RCINADVQLPERAPARTWLTLRAPAGTRLQRVLVDGKPAKAQGPHTDRVALPGAAALVKVQAWYA >Mature_785_residues MDRRTFLRQGMAATAAVGAGAALATPAAASAASTLPAPTLPRLEPLPSAAHVGSTLCSFTHLQQHWTVYEHLDDAQGQLT LWSDSGMLRLDKRTEPVYPAAGTPYFGLPLAQVAMAEADLLADRLLRDGDPDEAQVRDVAPPAASLLDPKDNGGRWPWTT FVGTRESLDTMPILPNGRSRTSRPEHAFRELGEEALIKRREEGMLGGWMPAVRKVMRREGEPDSWYDVLVFADVRARDRF VVQTWHRTMQVKAGAVVAVHYTHSYPEFAPSRSAATAEQFYAALIDFAAYWQQALDGTVQAQFPDASWNDMVQFAFAREL VVRPGGDYPKYGAVERDYYGNEYDGFQDTFTSSFYANLEWGRFAQAAAVLDNYFDAFVQDDGLPNMRGPEVGQFGLTLSL LARYLRYTGDAPRLRRVLPKIVATAQVLCALHDQALALPRTAHGHGLLHGWNESDACLFPDPSLWWKPYYANSALTIRGW EDIAQVWSTLGGDAGQATQWQRRATQLRARLEASLRTNVRRDLSPPYVGPLPGTTLTFRQSLLQEKPSEQQWPHRAYAEL LQADVLPHDLAHLVIDCLRGHGGTSIGVVANIAPPEPGSRDLLGFISYGYAQQLLRLDRIEEYLLFVYAHRYQVHTRGSW TAGEVSGITGGMPLFCIPAQMTIPLLLRWMLVSDDSAGEQLFLARAVPRAWLGSGAPVGISAAPTRWGTVALTLRTDTVA RCINADVQLPERAPARTWLTLRAPAGTRLQRVLVDGKPAKAQGPHTDRVALPGAAALVKVQAWYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86607; Mature: 86607
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRTFLRQGMAATAAVGAGAALATPAAASAASTLPAPTLPRLEPLPSAAHVGSTLCSFT CCHHHHHHHCHHHHHHHCCCCHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH HLQQHWTVYEHLDDAQGQLTLWSDSGMLRLDKRTEPVYPAAGTPYFGLPLAQVAMAEADL HHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LADRLLRDGDPDEAQVRDVAPPAASLLDPKDNGGRWPWTTFVGTRESLDTMPILPNGRSR HHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCC TSRPEHAFRELGEEALIKRREEGMLGGWMPAVRKVMRREGEPDSWYDVLVFADVRARDRF CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH VVQTWHRTMQVKAGAVVAVHYTHSYPEFAPSRSAATAEQFYAALIDFAAYWQQALDGTVQ HHHHHHHHHEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE AQFPDASWNDMVQFAFARELVVRPGGDYPKYGAVERDYYGNEYDGFQDTFTSSFYANLEW EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCH GRFAQAAAVLDNYFDAFVQDDGLPNMRGPEVGQFGLTLSLLARYLRYTGDAPRLRRVLPK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH IVATAQVLCALHDQALALPRTAHGHGLLHGWNESDACLFPDPSLWWKPYYANSALTIRGW HHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEECCCCCCCCCEEECCCEEEEECH EDIAQVWSTLGGDAGQATQWQRRATQLRARLEASLRTNVRRDLSPPYVGPLPGTTLTFRQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH SLLQEKPSEQQWPHRAYAELLQADVLPHDLAHLVIDCLRGHGGTSIGVVANIAPPEPGSR HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCH DLLGFISYGYAQQLLRLDRIEEYLLFVYAHRYQVHTRGSWTAGEVSGITGGMPLFCIPAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEECHH MTIPLLLRWMLVSDDSAGEQLFLARAVPRAWLGSGAPVGISAAPTRWGTVALTLRTDTVA HHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHH RCINADVQLPERAPARTWLTLRAPAGTRLQRVLVDGKPAKAQGPHTDRVALPGAAALVKV HHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHEECCCCCCCCCCCCCCEECCCCEEEEEE QAWYA EEECC >Mature Secondary Structure MDRRTFLRQGMAATAAVGAGAALATPAAASAASTLPAPTLPRLEPLPSAAHVGSTLCSFT CCHHHHHHHCHHHHHHHCCCCHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH HLQQHWTVYEHLDDAQGQLTLWSDSGMLRLDKRTEPVYPAAGTPYFGLPLAQVAMAEADL HHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LADRLLRDGDPDEAQVRDVAPPAASLLDPKDNGGRWPWTTFVGTRESLDTMPILPNGRSR HHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCC TSRPEHAFRELGEEALIKRREEGMLGGWMPAVRKVMRREGEPDSWYDVLVFADVRARDRF CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH VVQTWHRTMQVKAGAVVAVHYTHSYPEFAPSRSAATAEQFYAALIDFAAYWQQALDGTVQ HHHHHHHHHEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE AQFPDASWNDMVQFAFARELVVRPGGDYPKYGAVERDYYGNEYDGFQDTFTSSFYANLEW EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCH GRFAQAAAVLDNYFDAFVQDDGLPNMRGPEVGQFGLTLSLLARYLRYTGDAPRLRRVLPK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH IVATAQVLCALHDQALALPRTAHGHGLLHGWNESDACLFPDPSLWWKPYYANSALTIRGW HHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEECCCCCCCCCEEECCCEEEEECH EDIAQVWSTLGGDAGQATQWQRRATQLRARLEASLRTNVRRDLSPPYVGPLPGTTLTFRQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH SLLQEKPSEQQWPHRAYAELLQADVLPHDLAHLVIDCLRGHGGTSIGVVANIAPPEPGSR HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCH DLLGFISYGYAQQLLRLDRIEEYLLFVYAHRYQVHTRGSWTAGEVSGITGGMPLFCIPAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEECHH MTIPLLLRWMLVSDDSAGEQLFLARAVPRAWLGSGAPVGISAAPTRWGTVALTLRTDTVA HHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHH RCINADVQLPERAPARTWLTLRAPAGTRLQRVLVDGKPAKAQGPHTDRVALPGAAALVKV HHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHEECCCCCCCCCCCCCCEECCCCEEEEEE QAWYA EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA