Click here to switch to the map view.

The map label for this gene is xsa [H]

Identifier: 21243266

GI number: 21243266

Start: 2976560

End: 2978074

Strand: Reverse

Name: xsa [H]

Synonym: XAC2533

Alternate gene names: 21243266

Gene position: 2978074-2976560 (Counterclockwise)

Preceding gene: 21243267

Following gene: 21243265

Centisome position: 57.54

GC content: 66.47

Gene sequence:

>1515_bases
ATGCAGCCGCCGCAGGGAACGCGGCTGCACGCGCCCGGCAACCCCATCCTCGCCGATGGCAGCGAATATTCCGCCGACCC
TGCGCCGCTGGTGGCCGATGGCAAGCTGTACATCATTGCCGGCCGCGACACCGCGGCTCCCAATCTCAATGCGTTCGTCA
TGCCTGGCTGGCAACTGTTCGTCAGCAGCGATCCGGCCAGCGGCGACTGGACCCACTACCGCGATCTGCTGCGGCCCCGG
CAGGTCTTTGCCTGGGCAGACAAGCGGTATGCCTACGCGTCCCAGATCGTGCAGGGCCCGGATGGGCGCTATTACCTGTA
TGCGCCGGTGCAGCAGCGCGATTCGCCCAATGCCGACCCATTCGCGATCGGCGTGGCGGTGGCCGACAGTCCGCTCGGCC
CGTGGACCGATGCGCACCCGCAAGGTCCGGTGGTCTCGCAATCGGTGCCGGGCCGCAACGACATCCAGAACATCGATCCG
ACCGTGATGGTCGACGACGATGGGCGGGTGTATCTGTATTGGGGTACCTTCGGCGCGTTGTACGGCGTGGAGCTGCAGCG
CGACATGGTCACTTTCAAGGGCGCGCCGGTCCTGGTGGACACGCTGGACGGTTATTTCGAAGCGCCCTGGCTGTTCAAGC
GCAACGGCACCTACTACCTGGCGTATGCGGCCAACAATGCCGGACGTCTTTCGCCTTGCACGCCCACGCTGTATCACGCC
TGCATCGCCTACGCGAGCGCACCGACACCGCTGGGGCCGTGGACGTACCGCGGCATCGTGTTGCCGCCGGTGTCCTCCAC
CACCTCGCATCCGGGTATCGTCGAATTTCATCGGCAGTGGTATCTGGTGTATCACACCGCCGATGCGCAGGGCGGCGGGC
ATTTCCGCCGCAGCGTGGCGATCGACCGGCTGGAATGGGACGACAGCACCCAACCGGCCAGCATCCGCACGGTGGTGCCG
ACGCGGCGTCCCACGCCTCCCGCGCCGCCCGTGCGCAATCAAGCGCCATCGGCCTACGCAACCGCGTCCAATGGCCCGGA
TATTCCGGTGCAGTACTGGATCGCCGCGCTCAACGATGGCGTCGTCAAGGCCAATCCATTGCCACCGGAGATGTGGGCCA
GCTGGACGGAGAACAATCCACCGCAGCAATGGCTGCAATACAGCTGGGCGCAACCGATCACCGTGGATCGCACGCGCATC
GTGTTCTGGGCCGATCACCCGGCAGGCGCCGATGTCGGCGTGGCCCCGCCAGCGCGTTGGCATCTGGAATACCGTCATGC
TGGGCGATGGCAGCCCGTGCAGCCGCGCGATCGGTATGGCACGCGTCCCGACCACGACGAAGCGGTGTCGTTCGCGCCGG
TGACGACACGTTGCGTACGTGTGGTCATGGACGCCTCTGGCGGTGCTGCCAGCTACGCCGCGCTGGCAGTACAGGAATGG
GAAGTGCTGGCCCCCCAGCCACAACGCCTGCCATCTGCCACGGCCGCTGACAGCAAGCGGTGCGATGCGCCGTGA

Upstream 100 bases:

>100_bases
TGGTGATCCAGATCAAGGCGGCAGCGCCATGATGCGTACGTTCTCACGGTTGCCGGTGCTGGCCTGCGGGTTGTTGCTGG
CCAGCGTTCCGGCCTGTGCC

Downstream 100 bases:

>100_bases
CGCAGCTGACCAAGCGCTGCGTGCGGCAGTGGAACGATGGCGGACGGTGCGCAGGCGGTGGAGTGCACTGTTGGAGTCTG
ACGAAGTGGCTTCCGCGTAC

Product: arabinosidase

Products: NA

Alternate protein names: Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase; Alpha-N-arabinofuranosidase; Arabinosidase [H]

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPGWQLFVSSDPASGDWTHYRDLLRPR
QVFAWADKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWTDAHPQGPVVSQSVPGRNDIQNIDP
TVMVDDDGRVYLYWGTFGALYGVELQRDMVTFKGAPVLVDTLDGYFEAPWLFKRNGTYYLAYAANNAGRLSPCTPTLYHA
CIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFHRQWYLVYHTADAQGGGHFRRSVAIDRLEWDDSTQPASIRTVVP
TRRPTPPAPPVRNQAPSAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWTENNPPQQWLQYSWAQPITVDRTRI
VFWADHPAGADVGVAPPARWHLEYRHAGRWQPVQPRDRYGTRPDHDEAVSFAPVTTRCVRVVMDASGGAASYAALAVQEW
EVLAPQPQRLPSATAADSKRCDAP

Sequences:

>Translated_504_residues
MQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPGWQLFVSSDPASGDWTHYRDLLRPR
QVFAWADKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWTDAHPQGPVVSQSVPGRNDIQNIDP
TVMVDDDGRVYLYWGTFGALYGVELQRDMVTFKGAPVLVDTLDGYFEAPWLFKRNGTYYLAYAANNAGRLSPCTPTLYHA
CIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFHRQWYLVYHTADAQGGGHFRRSVAIDRLEWDDSTQPASIRTVVP
TRRPTPPAPPVRNQAPSAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWTENNPPQQWLQYSWAQPITVDRTRI
VFWADHPAGADVGVAPPARWHLEYRHAGRWQPVQPRDRYGTRPDHDEAVSFAPVTTRCVRVVMDASGGAASYAALAVQEW
EVLAPQPQRLPSATAADSKRCDAP
>Mature_504_residues
MQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPGWQLFVSSDPASGDWTHYRDLLRPR
QVFAWADKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWTDAHPQGPVVSQSVPGRNDIQNIDP
TVMVDDDGRVYLYWGTFGALYGVELQRDMVTFKGAPVLVDTLDGYFEAPWLFKRNGTYYLAYAANNAGRLSPCTPTLYHA
CIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFHRQWYLVYHTADAQGGGHFRRSVAIDRLEWDDSTQPASIRTVVP
TRRPTPPAPPVRNQAPSAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWTENNPPQQWLQYSWAQPITVDRTRI
VFWADHPAGADVGVAPPARWHLEYRHAGRWQPVQPRDRYGTRPDHDEAVSFAPVTTRCVRVVMDASGGAASYAALAVQEW
EVLAPQPQRLPSATAADSKRCDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37; =3.2.1.55 [H]

Molecular weight: Translated: 55443; Mature: 55443

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPGWQLF
CCCCCCCEEECCCCCEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEECCEEEE
VSSDPASGDWTHYRDLLRPRQVFAWADKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADP
EECCCCCCCHHHHHHHHCHHHHEEECCHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCCC
FAIGVAVADSPLGPWTDAHPQGPVVSQSVPGRNDIQNIDPTVMVDDDGRVYLYWGTFGAL
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCE
YGVELQRDMVTFKGAPVLVDTLDGYFEAPWLFKRNGTYYLAYAANNAGRLSPCTPTLYHA
EEEEEEEEEEEECCCCEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHH
CIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFHRQWYLVYHTADAQGGGHFRRSVA
HHHHHCCCCCCCCCEECCEEECCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE
IDRLEWDDSTQPASIRTVVPTRRPTPPAPPVRNQAPSAYATASNGPDIPVQYWIAALNDG
EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHEEHHCCC
VVKANPLPPEMWASWTENNPPQQWLQYSWAQPITVDRTRIVFWADHPAGADVGVAPPARW
EEECCCCCHHHHHCCCCCCCHHHHHHHCCCCCEEECCEEEEEEECCCCCCCCCCCCCHHE
HLEYRHAGRWQPVQPRDRYGTRPDHDEAVSFAPVTTRCVRVVMDASGGAASYAALAVQEW
EEEEECCCCCCCCCCHHHCCCCCCHHHCEEECHHHHHEEEEEEECCCCCCCEEEEEEECH
EVLAPQPQRLPSATAADSKRCDAP
HEECCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPGWQLF
CCCCCCCEEECCCCCEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEECCEEEE
VSSDPASGDWTHYRDLLRPRQVFAWADKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADP
EECCCCCCCHHHHHHHHCHHHHEEECCHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCCC
FAIGVAVADSPLGPWTDAHPQGPVVSQSVPGRNDIQNIDPTVMVDDDGRVYLYWGTFGAL
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCE
YGVELQRDMVTFKGAPVLVDTLDGYFEAPWLFKRNGTYYLAYAANNAGRLSPCTPTLYHA
EEEEEEEEEEEECCCCEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHH
CIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFHRQWYLVYHTADAQGGGHFRRSVA
HHHHHCCCCCCCCCEECCEEECCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE
IDRLEWDDSTQPASIRTVVPTRRPTPPAPPVRNQAPSAYATASNGPDIPVQYWIAALNDG
EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHEEHHCCC
VVKANPLPPEMWASWTENNPPQQWLQYSWAQPITVDRTRIVFWADHPAGADVGVAPPARW
EEECCCCCHHHHHCCCCCCCHHHHHHHCCCCCEEECCEEEEEEECCCCCCCCCCCCCHHE
HLEYRHAGRWQPVQPRDRYGTRPDHDEAVSFAPVTTRCVRVVMDASGGAASYAALAVQEW
EEEEECCCCCCCCCCHHHCCCCCCHHHCEEECHHHHHEEEEEEECCCCCCCEEEEEEECH
EVLAPQPQRLPSATAADSKRCDAP
HEECCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7766665 [H]