| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243159
Identifier: 21243159
GI number: 21243159
Start: 2827331
End: 2827834
Strand: Direct
Name: 21243159
Synonym: XAC2425
Alternate gene names: NA
Gene position: 2827331-2827834 (Clockwise)
Preceding gene: 21243155
Following gene: 21243164
Centisome position: 54.63
GC content: 57.14
Gene sequence:
>504_bases ATGTCTTCATGGAACCTCCTCAGAAAAGGGTACGAGAAAATTCCACTTCTGGCGTCAGCTAACCTGTGGGGGGATTACCT CCGCCCGCCAGAAGCGATCCATGGGAATCGGCAGGGCCGACATATGCATTCCTCCATGTATAGCTGCGATCGATATGCCG TTCACCCGCTACCGGGATCGACGTCCCCACGGCGGCCTCAGTGGACGGCGGCCGGGCAAGCTTCAGGTCATATAAGGCTC ACCAATCGACCGCAAATGGGTGATCGCCCGCGTGTTGTTGCGGATCGACGTCGATGGGAAACCACCATTCGCCTCCAATT CGTCGGCGTGTTCGATCGAGAAGCCCATATCGTTCAGGGCTGCTTTATCGCCCTTCGCCAGCGCTTTGTTGGCCGCACGC ATGAGGGCATTCGCCCATTGAAGGCGAGCGATCTCGAGCCGGATTGCATCCGAGCTGATACGATGTTTAGTTGCCATGTC ATCACCTCTATCCAGGTGGTGTAG
Upstream 100 bases:
>100_bases GTTGCCGAGCTGATGCCGTGTTCTCGGCACAACTCCGGCACTGACGCGCCGGCCTCGGCCTGCTTGAGGACGGCGATGAT CTGGCTGTCGGTGAAACGGG
Downstream 100 bases:
>100_bases TGGAAGTCCTGCCCGCGTGTTCCAGCACACGGGCGGGGCGCCTAGAGTAGATCAGTAGACCGTGAGGCCTTCTGATCCGA CTGCTGCTCGCCGAGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSSWNLLRKGYEKIPLLASANLWGDYLRPPEAIHGNRQGRHMHSSMYSCDRYAVHPLPGSTSPRRPQWTAAGQASGHIRL TNRPQMGDRPRVVADRRRWETTIRLQFVGVFDREAHIVQGCFIALRQRFVGRTHEGIRPLKASDLEPDCIRADTMFSCHV ITSIQVV
Sequences:
>Translated_167_residues MSSWNLLRKGYEKIPLLASANLWGDYLRPPEAIHGNRQGRHMHSSMYSCDRYAVHPLPGSTSPRRPQWTAAGQASGHIRL TNRPQMGDRPRVVADRRRWETTIRLQFVGVFDREAHIVQGCFIALRQRFVGRTHEGIRPLKASDLEPDCIRADTMFSCHV ITSIQVV >Mature_166_residues SSWNLLRKGYEKIPLLASANLWGDYLRPPEAIHGNRQGRHMHSSMYSCDRYAVHPLPGSTSPRRPQWTAAGQASGHIRLT NRPQMGDRPRVVADRRRWETTIRLQFVGVFDREAHIVQGCFIALRQRFVGRTHEGIRPLKASDLEPDCIRADTMFSCHVI TSIQVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19099; Mature: 18968
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSWNLLRKGYEKIPLLASANLWGDYLRPPEAIHGNRQGRHMHSSMYSCDRYAVHPLPGS CCCHHHHHHHHHHCCEEEECCCCHHHCCCCHHHCCCCCCCHHHHHHHCCCCEEEECCCCC TSPRRPQWTAAGQASGHIRLTNRPQMGDRPRVVADRRRWETTIRLQFVGVFDREAHIVQG CCCCCCCEEECCCCCCEEEECCCCCCCCCCCEECCCCCCCEEEEEEEEEEECCCHHHHHH CFIALRQRFVGRTHEGIRPLKASDLEPDCIRADTMFSCHVITSIQVV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure SSWNLLRKGYEKIPLLASANLWGDYLRPPEAIHGNRQGRHMHSSMYSCDRYAVHPLPGS CCHHHHHHHHHHCCEEEECCCCHHHCCCCHHHCCCCCCCHHHHHHHCCCCEEEECCCCC TSPRRPQWTAAGQASGHIRLTNRPQMGDRPRVVADRRRWETTIRLQFVGVFDREAHIVQG CCCCCCCEEECCCCCCEEEECCCCCCCCCCCEECCCCCCCEEEEEEEEEEECCCHHHHHH CFIALRQRFVGRTHEGIRPLKASDLEPDCIRADTMFSCHVITSIQVV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA