| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is yjeE [H]
Identifier: 21243141
GI number: 21243141
Start: 2804765
End: 2805265
Strand: Reverse
Name: yjeE [H]
Synonym: XAC2407
Alternate gene names: 21243141
Gene position: 2805265-2804765 (Counterclockwise)
Preceding gene: 21243142
Following gene: 21243140
Centisome position: 54.2
GC content: 66.27
Gene sequence:
>501_bases ATGATCGACCTCAACGGACAACTGCACGACGTGCAGGCCACCGAGACCCTGGGCCAAGCGCTGGCCGCAGCGCGACCGGT CAGCGCGGTGGTGCAGTTGCATGGCGACCTGGGCGCGGGCAAGTCCACGCTCGCGCGCGCGCTGCTGCGCGCACTCGGTG TCGCCGGGCCGATTCGCAGCCCCACCTACACGTTGGTCGAACGCTATCCGCTGAGTACTGGCGATGAAGCCTGGCATCTG GACCTCTACCGCATTGGCCATGCAGGAGAGCTGGACTTTCTCGGGCTCGACGAGGGCAGTGCGAGCTTGTGGCTGGTCGA ATGGCCGGAGCGCGGTGCTGGCGTGCTGCCGCCGGTCGATCTGGACGTTGAACTGGCCGTGGCCGGCGAAGGCCGCAGCG TTCGGTTGCTGGGCCGAAGTGCGATCGGGCATGCCTGGATGGACAGACTGTCACGGCAACCCCAGTTGCAGGTCCTTTTT GCCGCCTCACGAGAAGAATGA
Upstream 100 bases:
>100_bases CATGTGCCGGCGATGCGGCCGCGCACGCAGGCGAGCGCGGCCTGTTGCCCACCGACCTGCTTCCCGAGCTGCGCCGCCTT GCCAATGCTGGAGCCATCGC
Downstream 100 bases:
>100_bases ACGCCAGGTTATGGATTATTAAGGGAAGTTGCCTTGCAATTCACGCAGTTGGATGCTTGAATCCAGCGCCATGACACCGG GGATCCGCAACTTCTGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MIDLNGQLHDVQATETLGQALAAARPVSAVVQLHGDLGAGKSTLARALLRALGVAGPIRSPTYTLVERYPLSTGDEAWHL DLYRIGHAGELDFLGLDEGSASLWLVEWPERGAGVLPPVDLDVELAVAGEGRSVRLLGRSAIGHAWMDRLSRQPQLQVLF AASREE
Sequences:
>Translated_166_residues MIDLNGQLHDVQATETLGQALAAARPVSAVVQLHGDLGAGKSTLARALLRALGVAGPIRSPTYTLVERYPLSTGDEAWHL DLYRIGHAGELDFLGLDEGSASLWLVEWPERGAGVLPPVDLDVELAVAGEGRSVRLLGRSAIGHAWMDRLSRQPQLQVLF AASREE >Mature_166_residues MIDLNGQLHDVQATETLGQALAAARPVSAVVQLHGDLGAGKSTLARALLRALGVAGPIRSPTYTLVERYPLSTGDEAWHL DLYRIGHAGELDFLGLDEGSASLWLVEWPERGAGVLPPVDLDVELAVAGEGRSVRLLGRSAIGHAWMDRLSRQPQLQVLF AASREE
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=146, Percent_Identity=43.1506849315069, Blast_Score=115, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17806; Mature: 17806
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00399 SUCCINYL_COA_LIG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLNGQLHDVQATETLGQALAAARPVSAVVQLHGDLGAGKSTLARALLRALGVAGPIRS CCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC PTYTLVERYPLSTGDEAWHLDLYRIGHAGELDFLGLDEGSASLWLVEWPERGAGVLPPVD CCEEEHEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCC LDVELAVAGEGRSVRLLGRSAIGHAWMDRLSRQPQLQVLFAASREE CCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCC >Mature Secondary Structure MIDLNGQLHDVQATETLGQALAAARPVSAVVQLHGDLGAGKSTLARALLRALGVAGPIRS CCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC PTYTLVERYPLSTGDEAWHLDLYRIGHAGELDFLGLDEGSASLWLVEWPERGAGVLPPVD CCEEEHEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCC LDVELAVAGEGRSVRLLGRSAIGHAWMDRLSRQPQLQVLFAASREE CCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]