| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mutL
Identifier: 21243139
GI number: 21243139
Start: 2800969
End: 2802846
Strand: Reverse
Name: mutL
Synonym: XAC2405
Alternate gene names: 21243139
Gene position: 2802846-2800969 (Counterclockwise)
Preceding gene: 21243140
Following gene: 21243138
Centisome position: 54.16
GC content: 66.51
Gene sequence:
>1878_bases ATGGCGATCCGCCAGTTGCCCGAGATTTTGATCAACCAGATCGCTGCCGGCGAAGTTGTCGAGCGGCCCGCATCGGTGGT CAAGGAACTGGTCGAAAATGCACTCGATGCCGGTGCCACGCGCGTGGATATCGAGCTCGAAGAGGGCGGCGTCCGGCTGA TCCGTATCCGCGACAACGGTGGCGGTATCACCCCGGACGAACTGCCGCTGGCAGTCTCGCGGCATGCCACCAGCAAGATC GCTTCGCTGGACGACCTGGAGACTGTCGCCACGCTTGGCTTTCGCGGCGAAGCCTTGCCGTCGATCGCCTCGGTCAGTCG CTTTACCCTGACCTCGCGCCGCCACGACGCCGAACACGGCTCCGCATTGGAAATCGACGGCGGCCGCCTGGGCGAGGTGG TGCCGCGCGCGCATGCGCCAGGCACCACGGTCGAAGTGCGCGAACTGTTCTTCAATGTGCCGGCACGGCGCAAGTTCCTG CGTGCCGAACGCACCGAACTCGGCCACATCGAAGAGTGGTTGCGTTCGCTGGCGCTGGCGCGGCCGGATGTCGAATTGCG CGTCTCGCACAACGGCAAGCCGTCGCGGCGTTACAAGCCGGGCGATCTGTATTCGGATGCGCGGCTGGGCGAAACGCTCG GCGACGATTTTGCGCGCCAGGCCCTACGCGTGGACCACAGCGGCGCCGGTCTGCGCCTGCACGGCTGGGTTGCGCAACCG CATTACTCGCGTGCCAGCACCGATCAGCAATACCTCTACGTCAACGGCCGTTCGGTCAGAGAACGCAGCGTGGCGCATGC GGTGAAGATGGCCTACGGCGATGTGCTGTTCCATGGCCGCCAGCCGGCGTATGTGCTGTTTCTGGAGCTGGACCCGGCAC GTGTGGACGTCAATGTGCATCCGGCCAAACACGAGGTGCGCTTCCGCGAAGCGCGGCTGATCCACGATTTCGTCTATCGC ACCTTGCAGGATGCCTTGGCGCACACCCGCGCCGGCGCGACGCCGAACAGCATCGGCGGCGACGGCACCGGCTACACGGC CGCCACGTCTGGCGGAATGGGCGGCATCGCCAGTGGCGGCGTTCCAGGTAATGGCGGCGCATCCATTGGCAGCGGTGGCG CTTACAGCTACGCCAGCTGGACGCCTTCGCAAACGCCGCTGGGGCTGCGTGTGGACGAGGCGCGCGCCGCCTACAGCGCG CTGTATGCACCACCGCCGAGCAGCGCGCAGCAATCGGCAGGCATGCCGAACATGGCCGGCACCGGATTGCCGGCAACTGC GCAAGACAGCGGTGTGCCGCCGCTCGGTTATGCCATCGCGCAGTTGCACGGCATCTACATCCTGGCCGAGAACGCCGAAG GCTTGATCGTGGTCGACATGCACGCGGCGCACGAGCGCATCGGCTATGAGCGGCTCAAACATGCGCATGACAGCATCGGC CTGCACGCGCAACCGCTGCTGGTGCCGATGACGCTGGCAGTAGGCGAGCGCGAAGCCGACACCGCCGAGCGCGAAGCGGA GACGTTGGCCACGCTGGGCTTCGAGATCACCCGCGCCGGCCCGCAGTCGCTGCACGTGCGCAGCATTCCCGCGCTGCTGG CCAATGCCGAACCGGAGGCGCTGCTGCGCGATGTGCTGAGCGATCTGCGCGAGCATGGTCAAAGCCGCCGCATCGCCAGC GCACGCGACGAGCTGCTCTCCACCATGGCGTGCCACGGCGCGGTGCGCGCCAACCGCCGCCTCACCGTGCCCGAAATGAA CGCGTTGCTGCGCGATATGGAAGCCACCGAACGCTCGGGCCAATGCAACCATGGCCGACCGACCTGGGCGCGGTTTACGC TGAGCGATATCGATCGTTGGTTTTTGAGGGGGCGTTGA
Upstream 100 bases:
>100_bases CGGCGTCTGCGCGCCGCCGGATTGCCGTGCCGATGTCCGTCTTGTCTGTCACACCGCCGATCTACCGCGTTTCGCGCGTG CCGCACTGGAGCGTGCGCTG
Downstream 100 bases:
>100_bases TGGCAGTGCACAGGGGGAAGGGCTGGCTGCTCGGCATGTTAGTGGCGGCAATATTGGTCGGGTGCGGGCGCGATGCACCA CCGCCGGCTGCGCCGGTCGC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNGGGITPDELPLAVSRHATSKI ASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHGSALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFL RAERTELGHIEEWLRSLALARPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGDDFARQALRVDHSGAGLRLHGWVAQP HYSRASTDQQYLYVNGRSVRERSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVHPAKHEVRFREARLIHDFVYR TLQDALAHTRAGATPNSIGGDGTGYTAATSGGMGGIASGGVPGNGGASIGSGGAYSYASWTPSQTPLGLRVDEARAAYSA LYAPPPSSAQQSAGMPNMAGTGLPATAQDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKHAHDSIG LHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEPEALLRDVLSDLREHGQSRRIAS ARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLSDIDRWFLRGR
Sequences:
>Translated_625_residues MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNGGGITPDELPLAVSRHATSKI ASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHGSALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFL RAERTELGHIEEWLRSLALARPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGDDFARQALRVDHSGAGLRLHGWVAQP HYSRASTDQQYLYVNGRSVRERSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVHPAKHEVRFREARLIHDFVYR TLQDALAHTRAGATPNSIGGDGTGYTAATSGGMGGIASGGVPGNGGASIGSGGAYSYASWTPSQTPLGLRVDEARAAYSA LYAPPPSSAQQSAGMPNMAGTGLPATAQDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKHAHDSIG LHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEPEALLRDVLSDLREHGQSRRIAS ARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLSDIDRWFLRGR >Mature_624_residues AIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNGGGITPDELPLAVSRHATSKIA SLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHGSALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLR AERTELGHIEEWLRSLALARPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGDDFARQALRVDHSGAGLRLHGWVAQPH YSRASTDQQYLYVNGRSVRERSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVHPAKHEVRFREARLIHDFVYRT LQDALAHTRAGATPNSIGGDGTGYTAATSGGMGGIASGGVPGNGGASIGSGGAYSYASWTPSQTPLGLRVDEARAAYSAL YAPPPSSAQQSAGMPNMAGTGLPATAQDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKHAHDSIGL HAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEPEALLRDVLSDLREHGQSRRIASA RDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLSDIDRWFLRGR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=33.6363636363636, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI4505911, Length=404, Percent_Identity=29.2079207920792, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI189458898, Length=329, Percent_Identity=30.3951367781155, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI4505913, Length=342, Percent_Identity=29.2397660818713, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI310128478, Length=342, Percent_Identity=29.2397660818713, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI189458896, Length=397, Percent_Identity=29.9748110831234, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI310128480, Length=298, Percent_Identity=26.510067114094, Blast_Score=110, Evalue=6e-24, Organism=Homo sapiens, GI263191589, Length=235, Percent_Identity=27.6595744680851, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI91992162, Length=330, Percent_Identity=26.3636363636364, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI91992160, Length=330, Percent_Identity=26.3636363636364, Blast_Score=86, Evalue=1e-16, Organism=Escherichia coli, GI1790612, Length=565, Percent_Identity=42.1238938053097, Blast_Score=376, Evalue=1e-105, Organism=Caenorhabditis elegans, GI71991825, Length=318, Percent_Identity=34.5911949685535, Blast_Score=183, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17562796, Length=341, Percent_Identity=28.7390029325513, Blast_Score=144, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6323819, Length=315, Percent_Identity=33.968253968254, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324247, Length=361, Percent_Identity=28.808864265928, Blast_Score=133, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6325093, Length=716, Percent_Identity=21.0893854748603, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323063, Length=374, Percent_Identity=24.5989304812834, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17136968, Length=338, Percent_Identity=33.7278106508876, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI17136970, Length=369, Percent_Identity=28.7262872628726, Blast_Score=128, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_XANAC (Q8PJX2)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642721.1 - ProteinModelPortal: Q8PJX2 - SMR: Q8PJX2 - GeneID: 1156476 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2405 - NMPDR: fig|190486.1.peg.2365 - HOGENOM: HBG520262 - OMA: MACKAAV - ProtClustDB: PRK00095 - BioCyc: XAXO190486:XAC2405-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 67622; Mature: 67491
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCC GGITPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA CEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGDDFARQALRVDHSGAGLRLHGWVAQP CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC HYSRASTDQQYLYVNGRSVRERSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVH CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCEEEEEEC PAKHEVRFREARLIHDFVYRTLQDALAHTRAGATPNSIGGDGTGYTAATSGGMGGIASGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCC VPGNGGASIGSGGAYSYASWTPSQTPLGLRVDEARAAYSALYAPPPSSAQQSAGMPNMAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHCCCCCCCC TGLPATAQDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKHAHDSIG CCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCC LHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEPEA CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEEHHHHHHHHCCCCHHH LLRDVLSDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSG HHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC QCNHGRPTWARFTLSDIDRWFLRGR CCCCCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure AIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCC GGITPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA CEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGDDFARQALRVDHSGAGLRLHGWVAQP CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC HYSRASTDQQYLYVNGRSVRERSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVH CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCEEEEEEC PAKHEVRFREARLIHDFVYRTLQDALAHTRAGATPNSIGGDGTGYTAATSGGMGGIASGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCC VPGNGGASIGSGGAYSYASWTPSQTPLGLRVDEARAAYSALYAPPPSSAQQSAGMPNMAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHCCCCCCCC TGLPATAQDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKHAHDSIG CCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCC LHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEPEA CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEEHHHHHHHHCCCCHHH LLRDVLSDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSG HHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC QCNHGRPTWARFTLSDIDRWFLRGR CCCCCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217