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The map label for this gene is lcrT [H]

Identifier: 21243105

GI number: 21243105

Start: 2764543

End: 2764899

Strand: Reverse

Name: lcrT [H]

Synonym: XAC2371

Alternate gene names: 21243105

Gene position: 2764899-2764543 (Counterclockwise)

Preceding gene: 21243106

Following gene: 21243103

Centisome position: 53.42

GC content: 60.78

Gene sequence:

>357_bases
GTGCGGTTCCTTATCGAGGTCCACGCGCGGCCGTTGCGCCGGTCCTGTGCATGCGTCGGGCTGTCGCGTGCCGCTTGGTA
TGCACCGCCTCTGGACTGGACGGTGCGCGATGCCGAGCTGATTGCCGAGATCGCGCGTTACGTTGAAGCGCACCCCAGTC
GTGGCTTCTGGAAGTGCAGCGACTACCTTCGCAAGCAGCAACTAGGTTGGAACCCCAAACGCATCTATCGCGTTTACAAG
GCCATGAAGCTCAACCTACGCCGCGCTGCAAAGCGTCGCCTTCCCAAGGTCTGTTTGCGCTTGCCTAGGCCCTCAGCGTC
ACCGAACGTCAGTTGCATGGATCACTCCTCAACATGA

Upstream 100 bases:

>100_bases
CCAAGCTCAAACGGATGTACGCCGAGTTGGCGCTCGACAACGCGGCGATGAAGGACCTGATCGCAAAAAAACTCTAGGGC
CGGCGCGTAAACGCGAGGCG

Downstream 100 bases:

>100_bases
GGCGGGTCGTGTCGCGTATCTGTGGTCCGTTGTTCAGAGCTTCCTTAGTTCGAGGCTGCTGCGGTCTGATACAGGTTACG
GATTGCTGACGTCCACTGAG

Product: IS1479 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRFLIEVHARPLRRSCACVGLSRAAWYAPPLDWTVRDAELIAEIARYVEAHPSRGFWKCSDYLRKQQLGWNPKRIYRVYK
AMKLNLRRAAKRRLPKVCLRLPRPSASPNVSCMDHSST

Sequences:

>Translated_118_residues
MRFLIEVHARPLRRSCACVGLSRAAWYAPPLDWTVRDAELIAEIARYVEAHPSRGFWKCSDYLRKQQLGWNPKRIYRVYK
AMKLNLRRAAKRRLPKVCLRLPRPSASPNVSCMDHSST
>Mature_118_residues
MRFLIEVHARPLRRSCACVGLSRAAWYAPPLDWTVRDAELIAEIARYVEAHPSRGFWKCSDYLRKQQLGWNPKRIYRVYK
AMKLNLRRAAKRRLPKVCLRLPRPSASPNVSCMDHSST

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13781; Mature: 13781

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLIEVHARPLRRSCACVGLSRAAWYAPPLDWTVRDAELIAEIARYVEAHPSRGFWKCS
CCEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHH
DYLRKQQLGWNPKRIYRVYKAMKLNLRRAAKRRLPKVCLRLPRPSASPNVSCMDHSST
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC
>Mature Secondary Structure
MRFLIEVHARPLRRSCACVGLSRAAWYAPPLDWTVRDAELIAEIARYVEAHPSRGFWKCS
CCEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHH
DYLRKQQLGWNPKRIYRVYKAMKLNLRRAAKRRLPKVCLRLPRPSASPNVSCMDHSST
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]