| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yidD [C]
Identifier: 21243093
GI number: 21243093
Start: 2754018
End: 2754305
Strand: Direct
Name: yidD [C]
Synonym: XAC2359
Alternate gene names: 21243093
Gene position: 2754018-2754305 (Clockwise)
Preceding gene: 21243092
Following gene: 21243094
Centisome position: 53.21
GC content: 65.97
Gene sequence:
>288_bases GTGGCATATCATTGGCAAGTGATCTCACGCCTGCTCATCGCGCTGCTGCGCGTCTACAAGCTCGTCATCAGCCCCCTGCT CGGGCCGCGTTGCCGTTTTGCACCAAGCTGTTCGGACTACGCGATGACCGCCATCGGCCGCTTCGGCCCGCTGCGCGGCA GCTGGCTCGCCGCACGCAGGCTCGGCCGCTGTCATCCCTTCCATCCGGGCGGATTCGATCCGGTGCCCGATGCGCCCACC TCGCCCTCCCCGTCTTCTTCCTGCAGCTGCAAAGGACCCCATCCATGA
Upstream 100 bases:
>100_bases TAGCAGCCACGAAACGCTCATCCTTGGTTCCCCCGGGGCCCGGGAAAGCGGGCCTTTATAACGTACCCCGCGGACCCCCG GCAACCACCTATTAATGCAA
Downstream 100 bases:
>100_bases GCCGAACCGTCATCGTCAATGCCCGCCTGGTCAATGAAGGCAAGGAGTTCGACGCCGATCTCCTGATCGAGGGCGGCCGC ATCGCCAAGATCGACAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MAYHWQVISRLLIALLRVYKLVISPLLGPRCRFAPSCSDYAMTAIGRFGPLRGSWLAARRLGRCHPFHPGGFDPVPDAPT SPSPSSSCSCKGPHP
Sequences:
>Translated_95_residues MAYHWQVISRLLIALLRVYKLVISPLLGPRCRFAPSCSDYAMTAIGRFGPLRGSWLAARRLGRCHPFHPGGFDPVPDAPT SPSPSSSCSCKGPHP >Mature_94_residues AYHWQVISRLLIALLRVYKLVISPLLGPRCRFAPSCSDYAMTAIGRFGPLRGSWLAARRLGRCHPFHPGGFDPVPDAPTS PSPSSSCSCKGPHP
Specific function: Unknown
COG id: COG0759
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0161 family [H]
Homologues:
Organism=Escherichia coli, GI87082322, Length=71, Percent_Identity=61.9718309859155, Blast_Score=98, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002696 - ProDom: PD004225 [H]
Pfam domain/function: PF01809 DUF37 [H]
EC number: NA
Molecular weight: Translated: 10359; Mature: 10228
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYHWQVISRLLIALLRVYKLVISPLLGPRCRFAPSCSDYAMTAIGRFGPLRGSWLAARR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LGRCHPFHPGGFDPVPDAPTSPSPSSSCSCKGPHP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AYHWQVISRLLIALLRVYKLVISPLLGPRCRFAPSCSDYAMTAIGRFGPLRGSWLAARR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LGRCHPFHPGGFDPVPDAPTSPSPSSSCSCKGPHP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA