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The map label for this gene is cycK [H]

Identifier: 21243063

GI number: 21243063

Start: 2720712

End: 2722649

Strand: Direct

Name: cycK [H]

Synonym: XAC2328

Alternate gene names: 21243063

Gene position: 2720712-2722649 (Clockwise)

Preceding gene: 21243062

Following gene: 21243064

Centisome position: 52.57

GC content: 67.39

Gene sequence:

>1938_bases
ATGCTTCCTGAACTCGGGACGTTGCTGCTGGTGCTGGCCCTGCTGGTGGCGCTGGTGCAGGCCGTGGTGCCGCTGGCCGG
CGCACAGCGCGGACGCAGCAGCTGGATGGCCGTGGCGCGACCGGCGGCGCTGGTGCAGCTGGCACTGATCGCATCGGCCT
TCGCCGTGTTGACGCACGCCTTCTTGGTGCAGGATTTTTCGGTGCGCTACGTCGCCGAGAATTCCAACAGCCTGCTGCCG
GTGATGTACCGCTATTCGGCAGTGTGGGGTGCGCACGAAGGCTCGCTGCTGCTGTGGACGCTGGTGCTGGGGTTGTGGAC
CGGCGCGGTGGCGATCTGGTCGCGGCAGCTGCCGGCGCATGTGATCGCGCGCGTGCTCGGCGTCATGGCGCTGGTCAGCA
TCGGGTTTCTGGCGTTCTTGCTGTTCACCTCCAACCCGTTTGCGCGGTTGTTTCCGGTGCCGCTGGAGGGTGGCGACCTC
AATCCGCTGCTGCAGGATCCGGGGCTGATCGTCCATCCGCCGATGCTGTATTGCGGCTACGTCGGCTTTGCGGTGCCGTT
CGCATTCGCCATCGCCGCACTGCTGGAAGGCCGCATGGACGCGTGCTGGCTGCGCTGGACGCGGCCGTGGACCAATGTCG
CCTGGTCGATGCTCACCGTCGGCATCGCGCTCGGTAGCTGGTGGGCGTATTACGAGCTGGGCTGGGGTGGCTGGTGGTTC
TGGGACCCGGTGGAGAACGCCAGTTTCATGCCGTGGCTGGTGGGCACCGCACTGTTGCATTCGCAGGCGGTGACCGAAAA
GCGCGGCAGCTTCGCCAGCTGGACCTTGTTGCTGGCGATCGCCGCCTTTGCGCTGTCGCTGCTGGGCACGTTTCTGGTGC
GCTCGGGCGTGCTGACCAGCGTGCATTCGTTCGCCGCCGACCCGTCGCGCGGACTGTTCATTCTGGTATTCCTGCTGGCC
GTGGTCGGTGGTTCGTTGCTGCTGTATGCGCTGCGCGCGCCGCTTCTGTCGGTGGCGGACGATCCGCGTCGCGCATTCGC
CGGCAGTTCGCGCGAAACCTTGTTGCTGTTGAACAACCTGCTGCTCACCTGCGCCTGCGCAATGGTGTTGCTGGGCACCT
TGTATCCGCTGCTCGCCGATGCCTTGGGGCTGGGCAAGCTGTCGGTTGGCCCGCCCTACTTCGGCACCTTGTTCGTGGTG
TTGATGGCGCCGCTGGTGGCACTGCTGCCCTTCGGCCCGCTCACCCGCTGGCAGCGCGAACAGGCCTCGCGGCCGGTGGC
GCTGCTGGCGCCGTGGGCAGCCCTGGCGTTGGCTGCCGGCGTGCTGGCCTGGTTCGCCGCGCCGCAGGGGCAGTTGAAAG
CCGCCTTCGGTGTCGCCGGTGCAGCCTGGGTGTTGCTGGGCACCGCGCGGTTCCTGTGGACGCGGCGGGCGGCCAAGGGG
CGCAAATTCACCGCCGAGATGCTGGGCATGGTGCTGGCGCACCTGGGCGTTGCGGTGTTCCTGTCCGGTGCCATGCTGGT
GGAGGGATTGAGCCTGCAGCGCGAAGTGGCGCTGGCGCCCGGGCAACAGGTGCAGATCGGCCGCTATGCACTGCATTTCG
ACGGGCTGGAAGAGCTGCGCGGGCCCAATTACGTGTCCGACCGTGCCAACCTGCAGGTGTTCAAGGACGATGCGCCGGCG
GGCATGCTGCATGCGGAAAAGCGCCGCTACGCCAGTGGCGGCCAGACGTTGACCGAGGCGGCGATCCGCCCTGGCCCGTT
TGGCGACCTGTATGTCGCCCTTGGCGAACCGCTGGGCAACCAGGCCTGGGCGGTACGTGTCCACCTCAAACCGTTCGTCC
GCTGGATCTGGCTGGGAGCGCTGCTGATGGCGCTCGGCGGCCTGGTGACCGCGGCCGACCGGCGTTTTCGTCGTTCTCCG
GAGATCCAAGATGGTTGA

Upstream 100 bases:

>100_bases
ACCGCGCGTGGGCAAGCAGGTGCAACTGCTGCCGGAATTCGGACTCGGCAGTGCACTTGCCGTTGTGGCACCGGCCCATG
CTCGACAACGCGCCGACCCG

Downstream 100 bases:

>100_bases
GTCACGTTCACCCCGCCTGCCCACTGCGGTTCTCGTGGGCGCCATCGTGCTGCTGCTCGCCCTGGCAGCGCTGCTGGTCT
ATGCGGTGGTGCGCTCCGGT

Product: C-type cytochrome biogenesis membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MLPELGTLLLVLALLVALVQAVVPLAGAQRGRSSWMAVARPAALVQLALIASAFAVLTHAFLVQDFSVRYVAENSNSLLP
VMYRYSAVWGAHEGSLLLWTLVLGLWTGAVAIWSRQLPAHVIARVLGVMALVSIGFLAFLLFTSNPFARLFPVPLEGGDL
NPLLQDPGLIVHPPMLYCGYVGFAVPFAFAIAALLEGRMDACWLRWTRPWTNVAWSMLTVGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLVGTALLHSQAVTEKRGSFASWTLLLAIAAFALSLLGTFLVRSGVLTSVHSFAADPSRGLFILVFLLA
VVGGSLLLYALRAPLLSVADDPRRAFAGSSRETLLLLNNLLLTCACAMVLLGTLYPLLADALGLGKLSVGPPYFGTLFVV
LMAPLVALLPFGPLTRWQREQASRPVALLAPWAALALAAGVLAWFAAPQGQLKAAFGVAGAAWVLLGTARFLWTRRAAKG
RKFTAEMLGMVLAHLGVAVFLSGAMLVEGLSLQREVALAPGQQVQIGRYALHFDGLEELRGPNYVSDRANLQVFKDDAPA
GMLHAEKRRYASGGQTLTEAAIRPGPFGDLYVALGEPLGNQAWAVRVHLKPFVRWIWLGALLMALGGLVTAADRRFRRSP
EIQDG

Sequences:

>Translated_645_residues
MLPELGTLLLVLALLVALVQAVVPLAGAQRGRSSWMAVARPAALVQLALIASAFAVLTHAFLVQDFSVRYVAENSNSLLP
VMYRYSAVWGAHEGSLLLWTLVLGLWTGAVAIWSRQLPAHVIARVLGVMALVSIGFLAFLLFTSNPFARLFPVPLEGGDL
NPLLQDPGLIVHPPMLYCGYVGFAVPFAFAIAALLEGRMDACWLRWTRPWTNVAWSMLTVGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLVGTALLHSQAVTEKRGSFASWTLLLAIAAFALSLLGTFLVRSGVLTSVHSFAADPSRGLFILVFLLA
VVGGSLLLYALRAPLLSVADDPRRAFAGSSRETLLLLNNLLLTCACAMVLLGTLYPLLADALGLGKLSVGPPYFGTLFVV
LMAPLVALLPFGPLTRWQREQASRPVALLAPWAALALAAGVLAWFAAPQGQLKAAFGVAGAAWVLLGTARFLWTRRAAKG
RKFTAEMLGMVLAHLGVAVFLSGAMLVEGLSLQREVALAPGQQVQIGRYALHFDGLEELRGPNYVSDRANLQVFKDDAPA
GMLHAEKRRYASGGQTLTEAAIRPGPFGDLYVALGEPLGNQAWAVRVHLKPFVRWIWLGALLMALGGLVTAADRRFRRSP
EIQDG
>Mature_645_residues
MLPELGTLLLVLALLVALVQAVVPLAGAQRGRSSWMAVARPAALVQLALIASAFAVLTHAFLVQDFSVRYVAENSNSLLP
VMYRYSAVWGAHEGSLLLWTLVLGLWTGAVAIWSRQLPAHVIARVLGVMALVSIGFLAFLLFTSNPFARLFPVPLEGGDL
NPLLQDPGLIVHPPMLYCGYVGFAVPFAFAIAALLEGRMDACWLRWTRPWTNVAWSMLTVGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLVGTALLHSQAVTEKRGSFASWTLLLAIAAFALSLLGTFLVRSGVLTSVHSFAADPSRGLFILVFLLA
VVGGSLLLYALRAPLLSVADDPRRAFAGSSRETLLLLNNLLLTCACAMVLLGTLYPLLADALGLGKLSVGPPYFGTLFVV
LMAPLVALLPFGPLTRWQREQASRPVALLAPWAALALAAGVLAWFAAPQGQLKAAFGVAGAAWVLLGTARFLWTRRAAKG
RKFTAEMLGMVLAHLGVAVFLSGAMLVEGLSLQREVALAPGQQVQIGRYALHFDGLEELRGPNYVSDRANLQVFKDDAPA
GMLHAEKRRYASGGQTLTEAAIRPGPFGDLYVALGEPLGNQAWAVRVHLKPFVRWIWLGALLMALGGLVTAADRRFRRSP
EIQDG

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=647, Percent_Identity=54.2503863987635, Blast_Score=619, Evalue=1e-178,
Organism=Escherichia coli, GI1790511, Length=364, Percent_Identity=50.2747252747253, Blast_Score=287, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 69675; Mature: 69675

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPELGTLLLVLALLVALVQAVVPLAGAQRGRSSWMAVARPAALVQLALIASAFAVLTHA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLVQDFSVRYVAENSNSLLPVMYRYSAVWGAHEGSLLLWTLVLGLWTGAVAIWSRQLPAH
HHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
VIARVLGVMALVSIGFLAFLLFTSNPFARLFPVPLEGGDLNPLLQDPGLIVHPPMLYCGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCHHCCCCCEEECHHHHHHH
VGFAVPFAFAIAALLEGRMDACWLRWTRPWTNVAWSMLTVGIALGSWWAYYELGWGGWWF
HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCEEE
WDPVENASFMPWLVGTALLHSQAVTEKRGSFASWTLLLAIAAFALSLLGTFLVRSGVLTS
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHSFAADPSRGLFILVFLLAVVGGSLLLYALRAPLLSVADDPRRAFAGSSRETLLLLNNL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHH
LLTCACAMVLLGTLYPLLADALGLGKLSVGPPYFGTLFVVLMAPLVALLPFGPLTRWQRE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QASRPVALLAPWAALALAAGVLAWFAAPQGQLKAAFGVAGAAWVLLGTARFLWTRRAAKG
HHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RKFTAEMLGMVLAHLGVAVFLSGAMLVEGLSLQREVALAPGQQVQIGRYALHFDGLEELR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCEEEECCCHHHHC
GPNYVSDRANLQVFKDDAPAGMLHAEKRRYASGGQTLTEAAIRPGPFGDLYVALGEPLGN
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCCCCC
QAWAVRVHLKPFVRWIWLGALLMALGGLVTAADRRFRRSPEIQDG
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLPELGTLLLVLALLVALVQAVVPLAGAQRGRSSWMAVARPAALVQLALIASAFAVLTHA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLVQDFSVRYVAENSNSLLPVMYRYSAVWGAHEGSLLLWTLVLGLWTGAVAIWSRQLPAH
HHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
VIARVLGVMALVSIGFLAFLLFTSNPFARLFPVPLEGGDLNPLLQDPGLIVHPPMLYCGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCHHCCCCCEEECHHHHHHH
VGFAVPFAFAIAALLEGRMDACWLRWTRPWTNVAWSMLTVGIALGSWWAYYELGWGGWWF
HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCEEE
WDPVENASFMPWLVGTALLHSQAVTEKRGSFASWTLLLAIAAFALSLLGTFLVRSGVLTS
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHSFAADPSRGLFILVFLLAVVGGSLLLYALRAPLLSVADDPRRAFAGSSRETLLLLNNL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHH
LLTCACAMVLLGTLYPLLADALGLGKLSVGPPYFGTLFVVLMAPLVALLPFGPLTRWQRE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QASRPVALLAPWAALALAAGVLAWFAAPQGQLKAAFGVAGAAWVLLGTARFLWTRRAAKG
HHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RKFTAEMLGMVLAHLGVAVFLSGAMLVEGLSLQREVALAPGQQVQIGRYALHFDGLEELR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCEEEECCCHHHHC
GPNYVSDRANLQVFKDDAPAGMLHAEKRRYASGGQTLTEAAIRPGPFGDLYVALGEPLGN
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCCCCC
QAWAVRVHLKPFVRWIWLGALLMALGGLVTAADRRFRRSPEIQDG
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]