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The map label for this gene is yafV [H]

Identifier: 21243056

GI number: 21243056

Start: 2715403

End: 2716206

Strand: Reverse

Name: yafV [H]

Synonym: XAC2321

Alternate gene names: 21243056

Gene position: 2716206-2715403 (Counterclockwise)

Preceding gene: 21243057

Following gene: 21243054

Centisome position: 52.48

GC content: 64.8

Gene sequence:

>804_bases
ATGCACGACCTGCGCATCTCCCTGATCCAAGGCGACACCCGCTGGCATGACCCCGCCGGTAATCGCGACTATTACGCTGC
GCTGCTGGAGCCGCTGGTCGGGCAGACCGATCTGGTGATCCTGCCGGAAACCTTCACCAGCGGGTTCTCCAACGACGCCA
TCGACAAGGCCGAAGGCATGGACGGGCCGACCGTGGCGTGGGCGCGCGCGCAGGCCGCACGTCTGGGTGCAGCGGTCGCC
GGCAGCGTGCAGGTGCGCACTGATGCCGGTGTATTCAACCGGCTGCTATGGGCTACGCCCGACGGGGCACTGCAGTGTTA
CGACAAGCGTCACCTGTTCCGCTTCGGCAACGAGCATCTGCGCTACGCGGCCGGGCGCGAGCGTCTGACAGTGGAATGGA
AGGGCTGGCGGATCAATCCGCAGGTCTGCTACGACCTTCGTTTCCCGGTGTTCTGCCGCAACCGCTTCGACGTGGAGCGC
CCGGGGCAGCTGGATTTCGATCTGCAAGTGTTCGTCGCCAACTGGCCGTCCGCCCGCGCCTATGCGTGGAAGACGTTGCT
GCGCGCACGCGCAATCGAAAACCTGTGCTTTGTGGCGGCGGTCAACCGCATTGGCATCGATGGCAACCAACTGCATTACG
CCGGCGACAGCGCGGTGATCGATTTCCTTGGCCAGCCACAGGTGGAAATCCGCGAACGCGAGCAGGTGGTCACCACCACC
ATCAGCGCCACCGCGCTGGCCGAGCACCGCGCCCGTTTTCCCGCGATGCTGGATGCCGATCGGTTCGAGATTGTGGATTG
GTGA

Upstream 100 bases:

>100_bases
CCGCTTTTTGATCTGAATTCGCACTGGCTCGATGACATAACGCCCTCATTAAACCGCTGTTCGATTCCCTATTCCCGATT
CTCCATTCCCGAGTCTCACC

Downstream 100 bases:

>100_bases
TTCGAGATGGGTACAAGCGCTGCCGCACAGATGCCTGCCAGCCCGCTGCTGCCAATCCCAAATCCCAAATCCCGGCTACT
GAGCCAGCTTGATCTCGTAG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLVGQTDLVILPETFTSGFSNDAIDKAEGMDGPTVAWARAQAARLGAAVA
GSVQVRTDAGVFNRLLWATPDGALQCYDKRHLFRFGNEHLRYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQLDFDLQVFVANWPSARAYAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
ISATALAEHRARFPAMLDADRFEIVDW

Sequences:

>Translated_267_residues
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLVGQTDLVILPETFTSGFSNDAIDKAEGMDGPTVAWARAQAARLGAAVA
GSVQVRTDAGVFNRLLWATPDGALQCYDKRHLFRFGNEHLRYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQLDFDLQVFVANWPSARAYAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
ISATALAEHRARFPAMLDADRFEIVDW
>Mature_267_residues
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLVGQTDLVILPETFTSGFSNDAIDKAEGMDGPTVAWARAQAARLGAAVA
GSVQVRTDAGVFNRLLWATPDGALQCYDKRHLFRFGNEHLRYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQLDFDLQVFVANWPSARAYAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
ISATALAEHRARFPAMLDADRFEIVDW

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=269, Percent_Identity=44.9814126394052, Blast_Score=221, Evalue=4e-59,
Organism=Drosophila melanogaster, GI17933642, Length=240, Percent_Identity=29.5833333333333, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30179; Mature: 30179

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLVGQTDLVILPETFTSGFSNDAIDKAEGM
CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHCCCCCCCCCHHHCCC
DGPTVAWARAQAARLGAAVAGSVQVRTDAGVFNRLLWATPDGALQCYDKRHLFRFGNEHL
CCCEEHHHHHHHHHHHHHEECCEEEEECCHHHHHHEEECCCCCEEEHHHHHHHHHCCHHH
RYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQLDFDLQVFVANWPSARA
EEECCCCEEEEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
YAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCHHHHHHHEEEEEE
ISATALAEHRARFPAMLDADRFEIVDW
HHHHHHHHHHHCCCCEECCCCEEEECC
>Mature Secondary Structure
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLVGQTDLVILPETFTSGFSNDAIDKAEGM
CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHCCCCCCCCCHHHCCC
DGPTVAWARAQAARLGAAVAGSVQVRTDAGVFNRLLWATPDGALQCYDKRHLFRFGNEHL
CCCEEHHHHHHHHHHHHHEECCEEEEECCHHHHHHEEECCCCCEEEHHHHHHHHHCCHHH
RYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQLDFDLQVFVANWPSARA
EEECCCCEEEEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
YAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCHHHHHHHEEEEEE
ISATALAEHRARFPAMLDADRFEIVDW
HHHHHHHHHHHCCCCEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]