| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is rfb303 [H]
Identifier: 21243029
GI number: 21243029
Start: 2684966
End: 2685934
Strand: Reverse
Name: rfb303 [H]
Synonym: XAC2294
Alternate gene names: 21243029
Gene position: 2685934-2684966 (Counterclockwise)
Preceding gene: 21243030
Following gene: 21243028
Centisome position: 51.9
GC content: 64.5
Gene sequence:
>969_bases ATGGTGTGGCTGTGGTGCGTGCTGCACCTGCTGGTCGCGGCACTGGGGACCTGGGGGCTGCGGCGCTATGCCTTGCACCG CCGCCTGCTCGATCATCCCGGTGAACGGCGTAGCCACGTGGTGGCAACCCCGCGCGGCGGCGGCATGGCGATTGTGGCGG CGATCTTGCTGGGCTGCGTTGCAGCTTGCGCGCTATGGCCGACATCTCGGCTGACGGTCTGCTGGTTCGCGGCGGGCTTG GTCGCAGTGGCCGGGGTGGGCTGGTGGGACGACCACCGTCCGCTTTCGGCAAGGCTGCGGTTCTCGATCCACCTGGCTGC CTCGGTGGCATTGGGCGCCTTGGTCTGGCATGGCACAGGCAGCGTGTGGGATGGAGTGCTGACTGCCGCTGCGTCCGTGA TGTTGATCAATGTCTGGAATTTCATGGATGGCATCAACGGTCTGGCCAGCACCCAGGCGGCATTGGCCGCCCTGGGATTC TCGCTGGTAGCGCCTGTCGGTTGGTCGTGGGCAGGTCTGGCGGTTGCCGCAGCGTGCCTCGGGTTTGTGCCGTTCAACTT CCCACGTGCGCGCATCTTCATGGGCGATGGCGGCAGCGGTGCGCTCGGCTATGTGCTGGCGGCGCTATTGGCGCTGAACG TCGCAGGTGGTCAGGTGAGCTGGTGGATCAGCTGGCTCCCGTTGACGGCCTTTCTTGTAGACGCCGGCTTCACACTGCTT GCTCGCATGCTCTCCGGGCAACGCTGGTGGGAGCCGCATGCCCAGCACGTGTACCAACGACTGGCGCGTCGTCTTGAGAC GCACGTTCCGGTAACGGGCGTTTATTTCGCTTTCAGCCTCATTGCCGTCTGCTTGTACCTGTTAATCCGTCATGATCCGT TCTGGCTGCAGGTGTCCGGCGCGCTGGTATGGGGCATGGGCGCCACTGCGATCTGGCATTTTCTGCGCGATGGATTGCGC AATTCCTGA
Upstream 100 bases:
>100_bases GCACACGCTGCGGCTTTGGTGCCAAGACGCATCACTGGCAATGCCCGAGCTGCAAGGAATGGGGTACGGTCAAGCCGCTG TTGAACTACGCGGTGGTCTG
Downstream 100 bases:
>100_bases CTAATGGACTTTTATGATTTCCTGGCGTGACCGTTTGACCAAGGCGCTGCCGCAGATAGCGGTCGTGGTACATGACCTGC TGATGGTGTGGGTGTGCTGG
Product: lipopolysaccharide core biosynthesis protein
Products: UMP; Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
Alternate protein names: UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MVWLWCVLHLLVAALGTWGLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCVAACALWPTSRLTVCWFAAGL VAVAGVGWWDDHRPLSARLRFSIHLAASVALGALVWHGTGSVWDGVLTAAASVMLINVWNFMDGINGLASTQAALAALGF SLVAPVGWSWAGLAVAAACLGFVPFNFPRARIFMGDGGSGALGYVLAALLALNVAGGQVSWWISWLPLTAFLVDAGFTLL ARMLSGQRWWEPHAQHVYQRLARRLETHVPVTGVYFAFSLIAVCLYLLIRHDPFWLQVSGALVWGMGATAIWHFLRDGLR NS
Sequences:
>Translated_322_residues MVWLWCVLHLLVAALGTWGLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCVAACALWPTSRLTVCWFAAGL VAVAGVGWWDDHRPLSARLRFSIHLAASVALGALVWHGTGSVWDGVLTAAASVMLINVWNFMDGINGLASTQAALAALGF SLVAPVGWSWAGLAVAAACLGFVPFNFPRARIFMGDGGSGALGYVLAALLALNVAGGQVSWWISWLPLTAFLVDAGFTLL ARMLSGQRWWEPHAQHVYQRLARRLETHVPVTGVYFAFSLIAVCLYLLIRHDPFWLQVSGALVWGMGATAIWHFLRDGLR NS >Mature_322_residues MVWLWCVLHLLVAALGTWGLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCVAACALWPTSRLTVCWFAAGL VAVAGVGWWDDHRPLSARLRFSIHLAASVALGALVWHGTGSVWDGVLTAAASVMLINVWNFMDGINGLASTQAALAALGF SLVAPVGWSWAGLAVAAACLGFVPFNFPRARIFMGDGGSGALGYVLAALLALNVAGGQVSWWISWLPLTAFLVDAGFTLL ARMLSGQRWWEPHAQHVYQRLARRLETHVPVTGVYFAFSLIAVCLYLLIRHDPFWLQVSGALVWGMGATAIWHFLRDGLR NS
Specific function: Catalyzes the formation of undecaprenyl-PP-N- acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to t
COG id: COG0472
COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 4 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000715 - InterPro: IPR018480 [H]
Pfam domain/function: PF00953 Glycos_transf_4 [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 34878; Mature: 34878
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWLWCVLHLLVAALGTWGLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH AACALWPTSRLTVCWFAAGLVAVAGVGWWDDHRPLSARLRFSIHLAASVALGALVWHGTG HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHCCCCC SVWDGVLTAAASVMLINVWNFMDGINGLASTQAALAALGFSLVAPVGWSWAGLAVAAACL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GFVPFNFPRARIFMGDGGSGALGYVLAALLALNVAGGQVSWWISWLPLTAFLVDAGFTLL HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARMLSGQRWWEPHAQHVYQRLARRLETHVPVTGVYFAFSLIAVCLYLLIRHDPFWLQVSG HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC ALVWGMGATAIWHFLRDGLRNS EEEECCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVWLWCVLHLLVAALGTWGLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH AACALWPTSRLTVCWFAAGLVAVAGVGWWDDHRPLSARLRFSIHLAASVALGALVWHGTG HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHCCCCC SVWDGVLTAAASVMLINVWNFMDGINGLASTQAALAALGFSLVAPVGWSWAGLAVAAACL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GFVPFNFPRARIFMGDGGSGALGYVLAALLALNVAGGQVSWWISWLPLTAFLVDAGFTLL HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARMLSGQRWWEPHAQHVYQRLARRLETHVPVTGVYFAFSLIAVCLYLLIRHDPFWLQVSG HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC ALVWGMGATAIWHFLRDGLRNS EEEECCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-Acetyl-D-Glucosamine; Undecaprenyl Phosphate [C]
Specific reaction: UDP-N-Acetyl-D-Glucosamine + Undecaprenyl Phosphate = UMP + Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12101296; 9384377 [H]