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The map label for this gene is ykfG [C]

Identifier: 21243016

GI number: 21243016

Start: 2668564

End: 2669058

Strand: Direct

Name: ykfG [C]

Synonym: XAC2281

Alternate gene names: 21243016

Gene position: 2668564-2669058 (Clockwise)

Preceding gene: 21243015

Following gene: 21243017

Centisome position: 51.56

GC content: 62.02

Gene sequence:

>495_bases
ATGGAACAACCTACATCCGATGTGCTGGCAAGCACCAGCACACCCGCCTTCTCCGTCCAGGAGAACCGTCTGATCTACCG
CGCCATCGAGGTGCTGGAACGCAAATTGTTCCAGCGCGAAGCGTACATCCCTTCGCCTGAAGCCCTGTTCGATTACCTGC
GTTTGAAGCTGGCCCGCGAGCCCAATGAAATCTTCGGCGCGGTCTTCCTCGACAACAAGCATCGGGTCATCGCGTTCGAG
GCCCTGGCGCTCGGCACGATCAACCAGGCGATCGTCCACCCTCGCGTGGTCGTCAGACGCGCGATGGAATTGAACGCAGC
CGCGGTGATCCTCGCGCACAACCATCCCTCGGGCGAGACCCAGGACAGCACAGCGGACCGGATGCTCACGGAACGACTGC
GGAGCGCGCTCGACTTTGTGGACATCCGCGTGCTCGACCACGTGATCGTCGGGAAGGGCACGCCCTACTCTTTCGCCCAG
GCGGGCTTGTTGTGA

Upstream 100 bases:

>100_bases
CCCAGCGCCCAGGCGCTGGAGGATGCACAACGTTTTCAACCCCAGGGGTCCATCCCCTCGGGGAGTTCCGGACCTCCTTC
TCATCCACGCCGGAGGCACC

Downstream 100 bases:

>100_bases
TCCAGAGGCGCCCCGGCAACGGGGCGCGCTCTTACTCGAACAACACGGAGCGCCCCGCGTCCTGTTTTGCGATAGCGCCG
GACAGGCGCATGCGTTCGAC

Product: RadC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEQPTSDVLASTSTPAFSVQENRLIYRAIEVLERKLFQREAYIPSPEALFDYLRLKLAREPNEIFGAVFLDNKHRVIAFE
ALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGETQDSTADRMLTERLRSALDFVDIRVLDHVIVGKGTPYSFAQ
AGLL

Sequences:

>Translated_164_residues
MEQPTSDVLASTSTPAFSVQENRLIYRAIEVLERKLFQREAYIPSPEALFDYLRLKLAREPNEIFGAVFLDNKHRVIAFE
ALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGETQDSTADRMLTERLRSALDFVDIRVLDHVIVGKGTPYSFAQ
AGLL
>Mature_164_residues
MEQPTSDVLASTSTPAFSVQENRLIYRAIEVLERKLFQREAYIPSPEALFDYLRLKLAREPNEIFGAVFLDNKHRVIAFE
ALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGETQDSTADRMLTERLRSALDFVDIRVLDHVIVGKGTPYSFAQ
AGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=145, Percent_Identity=53.1034482758621, Blast_Score=143, Evalue=6e-36,
Organism=Escherichia coli, GI1788997, Length=151, Percent_Identity=47.682119205298, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1788312, Length=144, Percent_Identity=50, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI87082300, Length=125, Percent_Identity=46.4, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18353; Mature: 18353

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQPTSDVLASTSTPAFSVQENRLIYRAIEVLERKLFQREAYIPSPEALFDYLRLKLARE
CCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PNEIFGAVFLDNKHRVIAFEALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGET
CHHHEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
QDSTADRMLTERLRSALDFVDIRVLDHVIVGKGTPYSFAQAGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure
MEQPTSDVLASTSTPAFSVQENRLIYRAIEVLERKLFQREAYIPSPEALFDYLRLKLARE
CCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PNEIFGAVFLDNKHRVIAFEALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGET
CHHHEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
QDSTADRMLTERLRSALDFVDIRVLDHVIVGKGTPYSFAQAGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA