| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243008
Identifier: 21243008
GI number: 21243008
Start: 2657818
End: 2659290
Strand: Direct
Name: 21243008
Synonym: XAC2273
Alternate gene names: NA
Gene position: 2657818-2659290 (Clockwise)
Preceding gene: 77748643
Following gene: 77748644
Centisome position: 51.35
GC content: 69.52
Gene sequence:
>1473_bases ATGAAAAGTAACGGCCTGCTCAAGTGGCTGATGATTCCCGTGGCAGCGCTGCTGGTCTTTCTTGGCATCCACCTCACGTC CGGACGCTCGGACCAGTCCGCCGCGGGCGGAGGCACCGCCCAGCTCACACCCGAGGAAATGAAGGCGCTCGGCATCGACG GCGACACGCCGCGCGACACCGTGGCGACGCTGGTCGCGCAAGTGAAGCAGCTGCGCGGCGAATTGCAAACGGCCATGGGC GACAACAAGAACCAGCGCGCGGAGAATGAGCGACTTCGCCAGCGCGACAGCTCCATCGACCAGCGCATCCAGTCCGCGCT CGACGGCGAGCGCGGCCGCCTGCTGCAGGAACGCGAGCAGGCGGTCGGTGACAAGCAGCAGACGCAGGGCATGCTGCAGG AACTGCAGCACAAGCTCGACCAACTCGGCGGCAAGGGCGGCTCCACCGACCTGCCGGTCGGCCTCGGCCTGGAGGAAGGC GACGGCAAGGGCTTCGGTGCCCAGGGCGCCCCGGGCGTCCGCTGGGTGGAGCCCGACGATGCGCGTCCCGACGCCGGCAA GGGCCCTGCGGGGGCTTCGGGAAAGGGGGAACGATTTCCGATGCGGTTCGGGCCGGCCGATGGTGGCACTCCCGGCGGCG GCTCCGTATCGGCACCCGAATCCAAGGCCGGCGCGGAGCCTAAGCCCGCCAAGCCGGTCTTCACGGTCCCCACGAATGCG ACGCTCATGGGGTCGGTGGCGATGACGGCTCTGATCGGCCGCGTGCCCATCGACGGCACGGTGAACGACCCCTACCCGTT CAAGGTGCTCATCGGCCCCGACAACCTCACGGCCAACGGCATCGATCTGCCGGAAGTAGCGGGCGCCGTGGTGAGCGGCA CGGCCTCCGGCGACTGGACGCTCTCTTGCGTGCGCGGCCAGATCCGCTCGGTCACCTTCGTGTTCCGCGACGGCACCATC CGCACGGTCCCCGACGAGAAGGGCCAGGGCGGCACCAGCGGCAACCGTGGCAACGCGGGCAACGGCACTGCCGCCGATGG ACAGGGCCCGATCCTTGGGGGCCTCGGCTGGATCAGCGATCCGCACGGCATCCCCTGCGTGAGCGGGGAGCGGCGCAGCA ACGCGCAGCAGTACCTGGGCTCGCAAGCGCTCATCACGGCCGCCGGGGCGGGCGCGGCTTCGCTCATCAAGAGCGACAGC GGCAGCGTTGCGGTGGTGAGCAACGGCAACGGCTCGCTGGGCACCGTGGGCATCTCCGGCAACGAGGCCATGGGCCGCAT TTTGGCCGGTGGCGTGCAGGAGATGTCGCAGTGGGTGAACAAGCTCTACGGCCAGGCCTTCGCCGCGGTGTACGTGCCGC CCGGCGCCCAGGTCGCCGTCCACCTCGAACAACCCTTGCAGATCGACCACGACGCCCAGGGCCGCAAGGTCCGCCACGCT ACCGGAGGAAGCCATGCGATCGACCTGGACTGA
Upstream 100 bases:
>100_bases ATCGACGAGGCGCGGAACCTGCCGGCGCCCGCGACCGAGCACTCGACCGAGCCCGCGCCCGTTCCAGCGGTCGCACCGCA GCCGCCTTCGGGAGCCCCCC
Downstream 100 bases:
>100_bases GCGCCGCGCGCCCTTGTACGTGTTTTGCGTGCTTCGCGCTCTTCGCGTCCCGCACGGTCTTCGTGCCCTGCTCGCCAGCC TCGCCCTGCTCCTGGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Protein
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKSNGLLKWLMIPVAALLVFLGIHLTSGRSDQSAAGGGTAQLTPEEMKALGIDGDTPRDTVATLVAQVKQLRGELQTAMG DNKNQRAENERLRQRDSSIDQRIQSALDGERGRLLQEREQAVGDKQQTQGMLQELQHKLDQLGGKGGSTDLPVGLGLEEG DGKGFGAQGAPGVRWVEPDDARPDAGKGPAGASGKGERFPMRFGPADGGTPGGGSVSAPESKAGAEPKPAKPVFTVPTNA TLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWTLSCVRGQIRSVTFVFRDGTI RTVPDEKGQGGTSGNRGNAGNGTAADGQGPILGGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGAASLIKSDS GSVAVVSNGNGSLGTVGISGNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDHDAQGRKVRHA TGGSHAIDLD
Sequences:
>Translated_490_residues MKSNGLLKWLMIPVAALLVFLGIHLTSGRSDQSAAGGGTAQLTPEEMKALGIDGDTPRDTVATLVAQVKQLRGELQTAMG DNKNQRAENERLRQRDSSIDQRIQSALDGERGRLLQEREQAVGDKQQTQGMLQELQHKLDQLGGKGGSTDLPVGLGLEEG DGKGFGAQGAPGVRWVEPDDARPDAGKGPAGASGKGERFPMRFGPADGGTPGGGSVSAPESKAGAEPKPAKPVFTVPTNA TLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWTLSCVRGQIRSVTFVFRDGTI RTVPDEKGQGGTSGNRGNAGNGTAADGQGPILGGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGAASLIKSDS GSVAVVSNGNGSLGTVGISGNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDHDAQGRKVRHA TGGSHAIDLD >Mature_490_residues MKSNGLLKWLMIPVAALLVFLGIHLTSGRSDQSAAGGGTAQLTPEEMKALGIDGDTPRDTVATLVAQVKQLRGELQTAMG DNKNQRAENERLRQRDSSIDQRIQSALDGERGRLLQEREQAVGDKQQTQGMLQELQHKLDQLGGKGGSTDLPVGLGLEEG DGKGFGAQGAPGVRWVEPDDARPDAGKGPAGASGKGERFPMRFGPADGGTPGGGSVSAPESKAGAEPKPAKPVFTVPTNA TLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWTLSCVRGQIRSVTFVFRDGTI RTVPDEKGQGGTSGNRGNAGNGTAADGQGPILGGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGAASLIKSDS GSVAVVSNGNGSLGTVGISGNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDHDAQGRKVRHA TGGSHAIDLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50302; Mature: 50302
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNGLLKWLMIPVAALLVFLGIHLTSGRSDQSAAGGGTAQLTPEEMKALGIDGDTPRDT CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHH VATLVAQVKQLRGELQTAMGDNKNQRAENERLRQRDSSIDQRIQSALDGERGRLLQEREQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVGDKQQTQGMLQELQHKLDQLGGKGGSTDLPVGLGLEEGDGKGFGAQGAPGVRWVEPDD HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCC ARPDAGKGPAGASGKGERFPMRFGPADGGTPGGGSVSAPESKAGAEPKPAKPVFTVPTNA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEECCCCC TLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWT HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEECCCCCCEE LSCVRGQIRSVTFVFRDGTIRTVPDEKGQGGTSGNRGNAGNGTAADGQGPILGGLGWISD EHHHHCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC PHGIPCVSGERRSNAQQYLGSQALITAAGAGAASLIKSDSGSVAVVSNGNGSLGTVGISG CCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCEEEEECCCCCEEEEEECC NEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDHDAQGRKVRHA CHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEC TGGSHAIDLD CCCCEEEECC >Mature Secondary Structure MKSNGLLKWLMIPVAALLVFLGIHLTSGRSDQSAAGGGTAQLTPEEMKALGIDGDTPRDT CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHH VATLVAQVKQLRGELQTAMGDNKNQRAENERLRQRDSSIDQRIQSALDGERGRLLQEREQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVGDKQQTQGMLQELQHKLDQLGGKGGSTDLPVGLGLEEGDGKGFGAQGAPGVRWVEPDD HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCC ARPDAGKGPAGASGKGERFPMRFGPADGGTPGGGSVSAPESKAGAEPKPAKPVFTVPTNA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEECCCCC TLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWT HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEECCCCCCEE LSCVRGQIRSVTFVFRDGTIRTVPDEKGQGGTSGNRGNAGNGTAADGQGPILGGLGWISD EHHHHCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC PHGIPCVSGERRSNAQQYLGSQALITAAGAGAASLIKSDSGSVAVVSNGNGSLGTVGISG CCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCEEEEECCCCCEEEEEECC NEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDHDAQGRKVRHA CHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEC TGGSHAIDLD CCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA