| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242979
Identifier: 21242979
GI number: 21242979
Start: 2627152
End: 2627859
Strand: Direct
Name: 21242979
Synonym: XAC2244
Alternate gene names: NA
Gene position: 2627152-2627859 (Clockwise)
Preceding gene: 21242978
Following gene: 21242980
Centisome position: 50.76
GC content: 62.43
Gene sequence:
>708_bases GTGGCAATCGTTGGCGGCTCCTTCGGGAGCCGCTTTTTTTTTTTGCGCGCATCTCCTTACCAGGGGTTACCTCGGCAATG GACGCTGCCATACACACTACCCGGCTTGTCGAGCCACTTGGAGAGCAGCATGACTTCTTCGCGCACACCACCGACCACCT CCGATCGGGACGCGCTGCCGAGCGCACGGCCCCCGACGCCCGGCCAACCGCTTCCCGATGATGAAATACCCTTCAAGGCC GATGTCTGGAGGGAAAACGGTCGCGTGATCGGGGCCACCTTCAGCGGCCAGATTTCCACCACGAGGTTCAACGGTCGGGT GAAGACCGGTGGCGCCGAAGTCAATGTCGAGCGAGGCAATGCCTTCGGCTCCGCTTCCACCAACGGAAGCTCCATGGATG GCCGTGTGGGTTTCAGGACCGGCATGGAGAACTTCGAGTTGAGCGCATCGTTCGCCCCGGGCGGAGAGCTCAGCGGATCC GGCAGGGTCACCGTGGGCGATGCGTCGTTCTCGTTTTCGAACGACTCCATAGGCACCGAGTTCAAGTTCGCCAGCGGCGC CAGCGCCGCGCTCAGCAGGAACGCTGACGGGGCATGGAACGCGAGTTGGAATTCCCCGACGGCGGGCAGCTTTCAGACGG CGCTGAGCTTCGGCAACAGCGGTGGCAGCTGGGCGATTAACGCCAACTTCACACTCAAGATCGAGTGA
Upstream 100 bases:
>100_bases GCACTTCGGGAGACATCCCGGAGAGCGGGCTCGATGTGCTGAACCAGGACGGGGATTCCGTCGAAGTCGCGCTCGCGCGG CAACTGGTGAACTGATCTTC
Downstream 100 bases:
>100_bases CGCCATAGCATCGATCCAGCGCGCAAACTGGCGCGCGCAGAGGTTTTCCGGAACCCAGGATGGGCGCAGATGCCGCAGCA ATCACTCGTCGCTCGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAIVGGSFGSRFFFLRASPYQGLPRQWTLPYTLPGLSSHLESSMTSSRTPPTTSDRDALPSARPPTPGQPLPDDEIPFKA DVWRENGRVIGATFSGQISTTRFNGRVKTGGAEVNVERGNAFGSASTNGSSMDGRVGFRTGMENFELSASFAPGGELSGS GRVTVGDASFSFSNDSIGTEFKFASGASAALSRNADGAWNASWNSPTAGSFQTALSFGNSGGSWAINANFTLKIE
Sequences:
>Translated_235_residues MAIVGGSFGSRFFFLRASPYQGLPRQWTLPYTLPGLSSHLESSMTSSRTPPTTSDRDALPSARPPTPGQPLPDDEIPFKA DVWRENGRVIGATFSGQISTTRFNGRVKTGGAEVNVERGNAFGSASTNGSSMDGRVGFRTGMENFELSASFAPGGELSGS GRVTVGDASFSFSNDSIGTEFKFASGASAALSRNADGAWNASWNSPTAGSFQTALSFGNSGGSWAINANFTLKIE >Mature_234_residues AIVGGSFGSRFFFLRASPYQGLPRQWTLPYTLPGLSSHLESSMTSSRTPPTTSDRDALPSARPPTPGQPLPDDEIPFKAD VWRENGRVIGATFSGQISTTRFNGRVKTGGAEVNVERGNAFGSASTNGSSMDGRVGFRTGMENFELSASFAPGGELSGSG RVTVGDASFSFSNDSIGTEFKFASGASAALSRNADGAWNASWNSPTAGSFQTALSFGNSGGSWAINANFTLKIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24632; Mature: 24501
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVGGSFGSRFFFLRASPYQGLPRQWTLPYTLPGLSSHLESSMTSSRTPPTTSDRDALP CEEECCCCCCEEEEEEECCCCCCCCCEECCEECCCHHHHHHHHHHCCCCCCCCCCCCCCC SARPPTPGQPLPDDEIPFKADVWRENGRVIGATFSGQISTTRFNGRVKTGGAEVNVERGN CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEEECCEEECCCEEEEEECCC AFGSASTNGSSMDGRVGFRTGMENFELSASFAPGGELSGSGRVTVGDASFSFSNDSIGTE CCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCEEEECCCCCCCE FKFASGASAALSRNADGAWNASWNSPTAGSFQTALSFGNSGGSWAINANFTLKIE EEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCEEEECEEEEEEC >Mature Secondary Structure AIVGGSFGSRFFFLRASPYQGLPRQWTLPYTLPGLSSHLESSMTSSRTPPTTSDRDALP EEECCCCCCEEEEEEECCCCCCCCCEECCEECCCHHHHHHHHHHCCCCCCCCCCCCCCC SARPPTPGQPLPDDEIPFKADVWRENGRVIGATFSGQISTTRFNGRVKTGGAEVNVERGN CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEEECCEEECCCEEEEEECCC AFGSASTNGSSMDGRVGFRTGMENFELSASFAPGGELSGSGRVTVGDASFSFSNDSIGTE CCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCEEEECCCCCCCE FKFASGASAALSRNADGAWNASWNSPTAGSFQTALSFGNSGGSWAINANFTLKIE EEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCEEEECEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA