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The map label for this gene is ydiP [H]

Identifier: 21242948

GI number: 21242948

Start: 2598564

End: 2600027

Strand: Direct

Name: ydiP [H]

Synonym: XAC2213

Alternate gene names: 21242948

Gene position: 2598564-2600027 (Clockwise)

Preceding gene: 21242947

Following gene: 21242951

Centisome position: 50.21

GC content: 70.29

Gene sequence:

>1464_bases
ATGAACCCCTCACCCCCAACGAGCAACGATATCGCGTACGGCAGCGTGTGCAGCGGCATCGAGGCCGTGAGCCTCGCCTG
GGAGCCGCTCGGGCTCAAGCCCGCCTGGTTCTCCGAGACGGATGCGTTCGCGAGCGCCGTGCTCGCGCACCGCTACCCGC
ACGTCCCGAACCTCGGCGACATGACCCGGCTGGCGCAGCGCATCCGTGACCGCAGCGTCCCGGCCCCTGACATCCTGGTG
GGCGGCACGCCCTGCCAGTCCTTCAGCGTCGCCGGCGCCCGCCAGGGCCTGGCCGATCCGCGCGGCGCGCTCACCCTGGC
CTACGTGGAGATCGCCAATGCCATCGACCAAGTCCGCAACCGTGCCCACCGCCCACCGGCCACGCTCGTCTGGGAAAACG
TCCCCGGCGTGCTCAGCGACCGCGGCAACGCCTTCGGCTGCCTGCTGGGCGCACTGGCCGGCGAAGACCATGCGCTCGAA
CCGCCAGGGAAGCGATGGACGCACGCTGGTTGTGTGTCTGGCCCCCGGCGCCGCATCGCCTGGCGCGTGCTGGACGCCCA
ATACTTCGGCGTGGCCCAGCGCCGCAAACGCGTGTTTCTTGTGGCAAGTGGTCGAGGGGGCGTCGATCCCGCCGAAATAC
TTTTTGAGCGGGAAGGCCTGCCGCGGGATCCTTCGCCGGGCGGCGCGCCGTGGCAAGGCGCTGCCCACGCTACTGGAGCA
GGCGCTCCGGCAGCAGGCCGATCGTCCGGACTGATGTCCCCCTACGGAAAGGTCTCCATCTCCGTGGGGTTCGGCAACGC
CCAGGGGCCCGCCGACGTTGCTGCCTGCCTGCTGGGCGCGCCGCCGCGCTTCGACCTTTCCACCGAGACGATGCTCGTGC
AGTCGGTGGCCGGCGCCATCAGCCATACCCTGGATACCGCCAACGGCGGCAAAGGCTCCGGCGAGGACGGCACCGGGAAG
GGAGTTCCGATCATCGCTTTCACCGCCCAGGGCAGCGGCGCCGATGCGGACGTGGGACGGTCGCCGACGCTGCGTGCCGA
CGCACATCGAGCGAGCCACGCCAATGCCGGCGTCGTTCCGGCCATCGCCTTCGCCCAGAATTCGCGCAGCGAATTGCGCT
GGGAGTCTGGCCACGGCCAGATCTCCGGCACCCTGTCAACCGGTGGCGGCACGCCGGGACAAGGCCGTCCCATGGTGCTG
CAGGCCGCCGCCTACGAGGACCATTACGTCTGCGCGCCGGAGGGTGCCGACACGGCGTGGGGAATGCAGTGGCGCGTGCG
CCGCCTGATGCCGCGGGAATGCGAACGCCTGCAAGGCATGCCCGACGACCACACGCTGGTGCCGTACCGGGGCAAACCGG
CCGCCGACGGGCCGCGCTACCGAGCCATCGGCAACTCGATGGCCGTTCCCTGCATCGCCTGGATCGGTGAGCGCCTCAGA
CGCAGCATGGTAGGGAAGTCCTGA

Upstream 100 bases:

>100_bases
CGGGTGGCCTCTTTCTCGCGAGCCGAAGACCGCGCGGTCTTCGGACCGCGCGGTCTTCGGCGCCTTCCTCCTGACGTCAT
CCCCACGAACAGGAGCCCCC

Downstream 100 bases:

>100_bases
CGCGCTGGCGGGAGATTCCGCGACGAGCGGCGTACGGATTTCCGATGGCGTGTGTCCCTGCGAGCGCGCGACGATAGCCA
TGCCGACCCGGGGCCATGAG

Product: cytosine-specific DNA methyltransferase

Products: NA

Alternate protein names: M2.BsuMI; Cytosine-specific methyltransferase M2.BsuMI [H]

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MNPSPPTSNDIAYGSVCSGIEAVSLAWEPLGLKPAWFSETDAFASAVLAHRYPHVPNLGDMTRLAQRIRDRSVPAPDILV
GGTPCQSFSVAGARQGLADPRGALTLAYVEIANAIDQVRNRAHRPPATLVWENVPGVLSDRGNAFGCLLGALAGEDHALE
PPGKRWTHAGCVSGPRRRIAWRVLDAQYFGVAQRRKRVFLVASGRGGVDPAEILFEREGLPRDPSPGGAPWQGAAHATGA
GAPAAGRSSGLMSPYGKVSISVGFGNAQGPADVAACLLGAPPRFDLSTETMLVQSVAGAISHTLDTANGGKGSGEDGTGK
GVPIIAFTAQGSGADADVGRSPTLRADAHRASHANAGVVPAIAFAQNSRSELRWESGHGQISGTLSTGGGTPGQGRPMVL
QAAAYEDHYVCAPEGADTAWGMQWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYRAIGNSMAVPCIAWIGERLR
RSMVGKS

Sequences:

>Translated_487_residues
MNPSPPTSNDIAYGSVCSGIEAVSLAWEPLGLKPAWFSETDAFASAVLAHRYPHVPNLGDMTRLAQRIRDRSVPAPDILV
GGTPCQSFSVAGARQGLADPRGALTLAYVEIANAIDQVRNRAHRPPATLVWENVPGVLSDRGNAFGCLLGALAGEDHALE
PPGKRWTHAGCVSGPRRRIAWRVLDAQYFGVAQRRKRVFLVASGRGGVDPAEILFEREGLPRDPSPGGAPWQGAAHATGA
GAPAAGRSSGLMSPYGKVSISVGFGNAQGPADVAACLLGAPPRFDLSTETMLVQSVAGAISHTLDTANGGKGSGEDGTGK
GVPIIAFTAQGSGADADVGRSPTLRADAHRASHANAGVVPAIAFAQNSRSELRWESGHGQISGTLSTGGGTPGQGRPMVL
QAAAYEDHYVCAPEGADTAWGMQWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYRAIGNSMAVPCIAWIGERLR
RSMVGKS
>Mature_487_residues
MNPSPPTSNDIAYGSVCSGIEAVSLAWEPLGLKPAWFSETDAFASAVLAHRYPHVPNLGDMTRLAQRIRDRSVPAPDILV
GGTPCQSFSVAGARQGLADPRGALTLAYVEIANAIDQVRNRAHRPPATLVWENVPGVLSDRGNAFGCLLGALAGEDHALE
PPGKRWTHAGCVSGPRRRIAWRVLDAQYFGVAQRRKRVFLVASGRGGVDPAEILFEREGLPRDPSPGGAPWQGAAHATGA
GAPAAGRSSGLMSPYGKVSISVGFGNAQGPADVAACLLGAPPRFDLSTETMLVQSVAGAISHTLDTANGGKGSGEDGTGK
GVPIIAFTAQGSGADADVGRSPTLRADAHRASHANAGVVPAIAFAQNSRSELRWESGHGQISGTLSTGGGTPGQGRPMVL
QAAAYEDHYVCAPEGADTAWGMQWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYRAIGNSMAVPCIAWIGERLR
RSMVGKS

Specific function: This methylase may recognize the double-stranded sequence CTCGAG, causing specific methylation on C-? on both strands, and protects the DNA from cleavage by the BsuMI endonuclease [H]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018117
- InterPro:   IPR001525 [H]

Pfam domain/function: PF00145 DNA_methylase [H]

EC number: =2.1.1.37 [H]

Molecular weight: Translated: 50998; Mature: 50998

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00094 C5_MTASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSPPTSNDIAYGSVCSGIEAVSLAWEPLGLKPAWFSETDAFASAVLAHRYPHVPNLGD
CCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
MTRLAQRIRDRSVPAPDILVGGTPCQSFSVAGARQGLADPRGALTLAYVEIANAIDQVRN
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
RAHRPPATLVWENVPGVLSDRGNAFGCLLGALAGEDHALEPPGKRWTHAGCVSGPRRRIA
HCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEE
WRVLDAQYFGVAQRRKRVFLVASGRGGVDPAEILFEREGLPRDPSPGGAPWQGAAHATGA
EEEECHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GAPAAGRSSGLMSPYGKVSISVGFGNAQGPADVAACLLGAPPRFDLSTETMLVQSVAGAI
CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
SHTLDTANGGKGSGEDGTGKGVPIIAFTAQGSGADADVGRSPTLRADAHRASHANAGVVP
HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
AIAFAQNSRSELRWESGHGQISGTLSTGGGTPGQGRPMVLQAAAYEDHYVCAPEGADTAW
EEEECCCCHHHCEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCC
GMQWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYRAIGNSMAVPCIAWIGERLR
CHHHHHHHHCHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
RSMVGKS
HHHCCCC
>Mature Secondary Structure
MNPSPPTSNDIAYGSVCSGIEAVSLAWEPLGLKPAWFSETDAFASAVLAHRYPHVPNLGD
CCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
MTRLAQRIRDRSVPAPDILVGGTPCQSFSVAGARQGLADPRGALTLAYVEIANAIDQVRN
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
RAHRPPATLVWENVPGVLSDRGNAFGCLLGALAGEDHALEPPGKRWTHAGCVSGPRRRIA
HCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEE
WRVLDAQYFGVAQRRKRVFLVASGRGGVDPAEILFEREGLPRDPSPGGAPWQGAAHATGA
EEEECHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GAPAAGRSSGLMSPYGKVSISVGFGNAQGPADVAACLLGAPPRFDLSTETMLVQSVAGAI
CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
SHTLDTANGGKGSGEDGTGKGVPIIAFTAQGSGADADVGRSPTLRADAHRASHANAGVVP
HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
AIAFAQNSRSELRWESGHGQISGTLSTGGGTPGQGRPMVLQAAAYEDHYVCAPEGADTAW
EEEECCCCHHHCEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCC
GMQWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYRAIGNSMAVPCIAWIGERLR
CHHHHHHHHCHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
RSMVGKS
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]