| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242921
Identifier: 21242921
GI number: 21242921
Start: 2559062
End: 2560747
Strand: Direct
Name: 21242921
Synonym: XAC2186
Alternate gene names: NA
Gene position: 2559062-2560747 (Clockwise)
Preceding gene: 21242920
Following gene: 21242924
Centisome position: 49.45
GC content: 63.52
Gene sequence:
>1686_bases TTGACCCGAGTCCGGTGGATGGAGCCTCCACCGGGCCAACCTGCATATCGGCCACATGCCACCCGGCCAAACAACGCAAT GCGGTTCCGCGTCCGCGCCTATTGCCTGGCGCCCGCCCGTGCTTCGGCCCCCATCATGGCGCGCTGGTCACGAATGACGC CCGAGGCTCGCATGACGCTCTACACGACGGACTACCTGGAGTACTACCTCACCCTCGTGGGTTGGATCGTCCAGAATGGC ATCTGGAACATCCTCGTGGCGAGCGGCGCGTTCGCCCTGCCCTTCGTCGCCATCGTCATCCAGGAATGGCTGCGGGCACG CGGGGAAGGCGCGGACGAAGGCAACAAGGGGGTGCTGTCGGCGGCGCGGATCGAGAACCGCGTGTGGGTGGCCGTGGTGG TCATCCTGTTCGCCGGCATCCCCTTCATCGATGTGGACCTCCAGACGATCCAGTTCGACGCCAGCCGCTCCAAACAGTGC AAGGTCGACGTGGCGACACCCCAGGACACGCGCTGGTCGAATGCCTTCACCACGCTCAACAACCAAAGTGCGCGGGTGCC GGTGTGGTGGTTTTTCATGCATGCGATTTCCAAGGCCGTGACCGGCGCGGCCGTCGCGGCCATCCCTTGCGGAACCGACC TGCGGCAGATGCGCATGGACATCGATAGCACGCGCATCAACGACCCGGTACTGGCCCAGGAGGTGGCCGACTTCACCCGG GACTGCTACGGGCCCGCGCGCGCGAAGCTTTTCATGGCACGGCCCGACCTCTCGGGTGCCCAGATGGACGATGTGACCTG GATCGGATCAACGTATTTTGTGGGGACGGGCGGCTTCTACGACAGCTACCACTCCCAGACACCCCGCACCGCCTGGCCCT ATGACACGACCCGCGATGCGGGACTGGCACAGGCAACGAATGGTGGCGGCTACCCTACCTGCAGGCAATGGTGGAACGAT GGCGAGCGGGGCCTGCGCAGCCGGCTGCTGGCGCAGTTGGACTCGGGGCTCCTCGCTCGTGTGGGCCGCTGGGCAAGCTT CGTGTCCCGACAGCAAGCCGACGACGCGATCATTCGCGCCATCGCCGCGCCCCGCCAGCAGATGATGAACCAGGGTCAGG CATACGCAGACTACGGCGGCCAGGTCGATATGACCCTGCCCAATATTGTCACGCGAGGTGCTGCGGATGTAGGCCTCGCC GCCGGCTCTGTCGGGTTCTTCCCGGCCATGGACGTCGTGCGCCAGGCCCTGCCGATGGTGCTGTCGTTTCTCAAGATGGC CATGGTGATCTGCGTGCCGCTCGTCCTTTTGTTCGGCACCTACGACCTCAAGGCCGTCGTGACGATGAGCTGCGTGCAGT TCGCACTCTTTTTCGTGGACTTCTGGTTCCAACTGGCCCGCTGGATCGACAGCACGATACTGGATGCCCTCTACGGCTGG AGCTCACCGCACAGCAACTTCAACCCCTTGCTGGGACTGAATAACGCGTTCGGCGACATGCTGCTCAACTTCGTGATGGC CATGATGTTCATCGTGCTACCCAGCTTATGGATTGCCGCTTTGGGTTGGGCCGGTGTTCGTGCGGGCAATATCGCTCAGA TGCTCACGACTGGTACTGAGGGTGCTCGATCCTCTGGAGGCAAGGGCGGCGACATCGCAATCAACGCGACGAAATCTCTA CGTTAG
Upstream 100 bases:
>100_bases TACGGCAACTGCTACTACGGCGACGAACGCCGCGTGATCGCGACCGCTACCCATCGCTGGTGAGTGGCAGGCGCACGCTT CGCCGCCGACCGCAACCCGA
Downstream 100 bases:
>100_bases TAATGACCGCCACAGTCATGGTTCTTCTTCCTCGCCTGGATCGATCCGGACTTCGCCCCTGTACAGGCCGTATCCTGCGA CGCCATCTCTCCACCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MTRVRWMEPPPGQPAYRPHATRPNNAMRFRVRAYCLAPARASAPIMARWSRMTPEARMTLYTTDYLEYYLTLVGWIVQNG IWNILVASGAFALPFVAIVIQEWLRARGEGADEGNKGVLSAARIENRVWVAVVVILFAGIPFIDVDLQTIQFDASRSKQC KVDVATPQDTRWSNAFTTLNNQSARVPVWWFFMHAISKAVTGAAVAAIPCGTDLRQMRMDIDSTRINDPVLAQEVADFTR DCYGPARAKLFMARPDLSGAQMDDVTWIGSTYFVGTGGFYDSYHSQTPRTAWPYDTTRDAGLAQATNGGGYPTCRQWWND GERGLRSRLLAQLDSGLLARVGRWASFVSRQQADDAIIRAIAAPRQQMMNQGQAYADYGGQVDMTLPNIVTRGAADVGLA AGSVGFFPAMDVVRQALPMVLSFLKMAMVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDALYGW SSPHSNFNPLLGLNNAFGDMLLNFVMAMMFIVLPSLWIAALGWAGVRAGNIAQMLTTGTEGARSSGGKGGDIAINATKSL R
Sequences:
>Translated_561_residues MTRVRWMEPPPGQPAYRPHATRPNNAMRFRVRAYCLAPARASAPIMARWSRMTPEARMTLYTTDYLEYYLTLVGWIVQNG IWNILVASGAFALPFVAIVIQEWLRARGEGADEGNKGVLSAARIENRVWVAVVVILFAGIPFIDVDLQTIQFDASRSKQC KVDVATPQDTRWSNAFTTLNNQSARVPVWWFFMHAISKAVTGAAVAAIPCGTDLRQMRMDIDSTRINDPVLAQEVADFTR DCYGPARAKLFMARPDLSGAQMDDVTWIGSTYFVGTGGFYDSYHSQTPRTAWPYDTTRDAGLAQATNGGGYPTCRQWWND GERGLRSRLLAQLDSGLLARVGRWASFVSRQQADDAIIRAIAAPRQQMMNQGQAYADYGGQVDMTLPNIVTRGAADVGLA AGSVGFFPAMDVVRQALPMVLSFLKMAMVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDALYGW SSPHSNFNPLLGLNNAFGDMLLNFVMAMMFIVLPSLWIAALGWAGVRAGNIAQMLTTGTEGARSSGGKGGDIAINATKSL R >Mature_560_residues TRVRWMEPPPGQPAYRPHATRPNNAMRFRVRAYCLAPARASAPIMARWSRMTPEARMTLYTTDYLEYYLTLVGWIVQNGI WNILVASGAFALPFVAIVIQEWLRARGEGADEGNKGVLSAARIENRVWVAVVVILFAGIPFIDVDLQTIQFDASRSKQCK VDVATPQDTRWSNAFTTLNNQSARVPVWWFFMHAISKAVTGAAVAAIPCGTDLRQMRMDIDSTRINDPVLAQEVADFTRD CYGPARAKLFMARPDLSGAQMDDVTWIGSTYFVGTGGFYDSYHSQTPRTAWPYDTTRDAGLAQATNGGGYPTCRQWWNDG ERGLRSRLLAQLDSGLLARVGRWASFVSRQQADDAIIRAIAAPRQQMMNQGQAYADYGGQVDMTLPNIVTRGAADVGLAA GSVGFFPAMDVVRQALPMVLSFLKMAMVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDALYGWS SPHSNFNPLLGLNNAFGDMLLNFVMAMMFIVLPSLWIAALGWAGVRAGNIAQMLTTGTEGARSSGGKGGDIAINATKSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61867; Mature: 61736
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVRWMEPPPGQPAYRPHATRPNNAMRFRVRAYCLAPARASAPIMARWSRMTPEARMTL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCHHEEE YTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVIQEWLRARGEGADEGNKGVLS EEHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AARIENRVWVAVVVILFAGIPFIDVDLQTIQFDASRSKQCKVDVATPQDTRWSNAFTTLN HHHHCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCHHEEEC NQSARVPVWWFFMHAISKAVTGAAVAAIPCGTDLRQMRMDIDSTRINDPVLAQEVADFTR CCCCCCHHHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHCHHCCCCCHHHHHHHHHHH DCYGPARAKLFMARPDLSGAQMDDVTWIGSTYFVGTGGFYDSYHSQTPRTAWPYDTTRDA HHCCHHHHEEEEECCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GLAQATNGGGYPTCRQWWNDGERGLRSRLLAQLDSGLLARVGRWASFVSRQQADDAIIRA CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IAAPRQQMMNQGQAYADYGGQVDMTLPNIVTRGAADVGLAAGSVGFFPAMDVVRQALPMV HHHHHHHHHHCCCEECCCCCEEEEEHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHH LSFLKMAMVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDALYGW HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSPHSNFNPLLGLNNAFGDMLLNFVMAMMFIVLPSLWIAALGWAGVRAGNIAQMLTTGTE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC GARSSGGKGGDIAINATKSLR CCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure TRVRWMEPPPGQPAYRPHATRPNNAMRFRVRAYCLAPARASAPIMARWSRMTPEARMTL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCHHEEE YTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVIQEWLRARGEGADEGNKGVLS EEHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AARIENRVWVAVVVILFAGIPFIDVDLQTIQFDASRSKQCKVDVATPQDTRWSNAFTTLN HHHHCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCHHEEEC NQSARVPVWWFFMHAISKAVTGAAVAAIPCGTDLRQMRMDIDSTRINDPVLAQEVADFTR CCCCCCHHHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHCHHCCCCCHHHHHHHHHHH DCYGPARAKLFMARPDLSGAQMDDVTWIGSTYFVGTGGFYDSYHSQTPRTAWPYDTTRDA HHCCHHHHEEEEECCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GLAQATNGGGYPTCRQWWNDGERGLRSRLLAQLDSGLLARVGRWASFVSRQQADDAIIRA CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IAAPRQQMMNQGQAYADYGGQVDMTLPNIVTRGAADVGLAAGSVGFFPAMDVVRQALPMV HHHHHHHHHHCCCEECCCCCEEEEEHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHH LSFLKMAMVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDALYGW HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSPHSNFNPLLGLNNAFGDMLLNFVMAMMFIVLPSLWIAALGWAGVRAGNIAQMLTTGTE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC GARSSGGKGGDIAINATKSLR CCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA