| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242919
Identifier: 21242919
GI number: 21242919
Start: 2555378
End: 2556628
Strand: Direct
Name: 21242919
Synonym: XAC2184
Alternate gene names: NA
Gene position: 2555378-2556628 (Clockwise)
Preceding gene: 21242915
Following gene: 21242920
Centisome position: 49.37
GC content: 63.07
Gene sequence:
>1251_bases TTGGCAATGCGCATCCCAGCCCAGGTAGGGAAAACGGTCCCTCGCTCGCCTCTTCACTCTAGACAGCGCACAACACGTTC GCCAATCACCAAGGAAGCTACGCCCGCCGAGGATGGCGCCGGCTTCCCATCCATTCCTACGGCGCCCCCCCCCGGACCAG GCATGCAGCTTCGCAGTAAGACCAATAAAGACAGCAGTGCAGAAACAAGACGGCCGAAACGGTGCATCACCGCCGGCTCA GTTCCACCACATCCAGGCCAGACAGGCCAGGGCCATCAACCCGACGCAGATCCCGCGCACGCGCCTGCGGGACGTGCACA ACGCATGGGTACCCTGGGTCAGCAGAAGCAACACCAAAATGCCGATGGTCACGATGCGCGCATCTCCGTTGCTCGCGAAC GCGTCAGCGGAAGTTTGCGGATCGATGTCCTCCACCCACCGGTATGGGTTGTCCGAGATGACATAGAGCAGCAGCATCCC GGTGGCGTAGCTTCCCCAAGACAGGACGGCGCACGCGATCCAGACCGCTTTTCTCAGACGGGACATCGCCAGGACTCACT TGCACTCGAACGACGCGCCGAGGATGGCCTCGTGCGCCGCGTCTTTCCTCGCCTCTCCCGTGCACGCAGTCACTGGATCG CCAACGCGCTTATAGACCTGGACGCTCCCGACGGGACCATACGCGCACACCAGGTATTTGCCGTAGGGATAAGGCCCTTC GAATCGCCAGATGGAGATCGATCTTCCACGGGGTTTCGGCTCGCCCTCATTGCTCGGAATCAACTGGGCCATGTCCCGCG GATGCCCCGAATACACCCCCATCGAGAACAGCCGCAGCGACCCGTTGCGCTCCAAATCGATGCTGGTCCCAGCCGGCAGG TCCGGGCTCTGCAACACCGCATCGGAAACGCGCAGCGTATCGGGACACTGCAGTGTCTCCTTGGCCGCAACAGGTGTGCA GGTGCCAACCAATGCGAGTGCCCACAGCAGCTTCATTGCAGATCCATCCATACCTTGCTCCCTCATGGTGGTCGCGGGTT TTGCGTCACCGACAAGCCACACCCGGCGCTCTTCGCTTCGCGTCTTGGCGCCACGCGTGGAGGCGTCATCGCCGCACGCC GCACGCCGCAGCGCGCACAAGCTGCCAGCGCTGGCGGTCAACGTCAACGGGCCGGATCAACCCCACGGAAACCCACGACC TTGGCTTTCCCTGCGCGCGCTCCTCGGCACGACCGCGAGTTGCTACGTTGA
Upstream 100 bases:
>100_bases CCTGTGACTCAGGCTCGGGGCGGGGGTGCTTGCTGCCAGCGAGCTTGTAAGTTGTCACTGCGTCGACTTTTGCCAGCGCC GGGTGAATTCGTAATCGGCG
Downstream 100 bases:
>100_bases TTCCGATATAGGAAAAAACAGCACCTGGAATCGGATTGAAGCCACGCCCCGACTTTGAGCACAGACTGCACGAGCACCCT ACCGCCCGTTCGGGCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MAMRIPAQVGKTVPRSPLHSRQRTTRSPITKEATPAEDGAGFPSIPTAPPPGPGMQLRSKTNKDSSAETRRPKRCITAGS VPPHPGQTGQGHQPDADPAHAPAGRAQRMGTLGQQKQHQNADGHDARISVARERVSGSLRIDVLHPPVWVVRDDIEQQHP GGVASPRQDGARDPDRFSQTGHRQDSLALERRAEDGLVRRVFPRLSRARSHWIANALIDLDAPDGTIRAHQVFAVGIRPF ESPDGDRSSTGFRLALIARNQLGHVPRMPRIHPHREQPQRPVALQIDAGPSRQVRALQHRIGNAQRIGTLQCLLGRNRCA GANQCECPQQLHCRSIHTLLPHGGRGFCVTDKPHPALFASRLGATRGGVIAARRTPQRAQAASAGGQRQRAGSTPRKPTT LAFPARAPRHDRELLR
Sequences:
>Translated_416_residues MAMRIPAQVGKTVPRSPLHSRQRTTRSPITKEATPAEDGAGFPSIPTAPPPGPGMQLRSKTNKDSSAETRRPKRCITAGS VPPHPGQTGQGHQPDADPAHAPAGRAQRMGTLGQQKQHQNADGHDARISVARERVSGSLRIDVLHPPVWVVRDDIEQQHP GGVASPRQDGARDPDRFSQTGHRQDSLALERRAEDGLVRRVFPRLSRARSHWIANALIDLDAPDGTIRAHQVFAVGIRPF ESPDGDRSSTGFRLALIARNQLGHVPRMPRIHPHREQPQRPVALQIDAGPSRQVRALQHRIGNAQRIGTLQCLLGRNRCA GANQCECPQQLHCRSIHTLLPHGGRGFCVTDKPHPALFASRLGATRGGVIAARRTPQRAQAASAGGQRQRAGSTPRKPTT LAFPARAPRHDRELLR >Mature_415_residues AMRIPAQVGKTVPRSPLHSRQRTTRSPITKEATPAEDGAGFPSIPTAPPPGPGMQLRSKTNKDSSAETRRPKRCITAGSV PPHPGQTGQGHQPDADPAHAPAGRAQRMGTLGQQKQHQNADGHDARISVARERVSGSLRIDVLHPPVWVVRDDIEQQHPG GVASPRQDGARDPDRFSQTGHRQDSLALERRAEDGLVRRVFPRLSRARSHWIANALIDLDAPDGTIRAHQVFAVGIRPFE SPDGDRSSTGFRLALIARNQLGHVPRMPRIHPHREQPQRPVALQIDAGPSRQVRALQHRIGNAQRIGTLQCLLGRNRCAG ANQCECPQQLHCRSIHTLLPHGGRGFCVTDKPHPALFASRLGATRGGVIAARRTPQRAQAASAGGQRQRAGSTPRKPTTL AFPARAPRHDRELLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45337; Mature: 45206
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRIPAQVGKTVPRSPLHSRQRTTRSPITKEATPAEDGAGFPSIPTAPPPGPGMQLRSK CCEECCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC TNKDSSAETRRPKRCITAGSVPPHPGQTGQGHQPDADPAHAPAGRAQRMGTLGQQKQHQN CCCCCCHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC ADGHDARISVARERVSGSLRIDVLHPPVWVVRDDIEQQHPGGVASPRQDGARDPDRFSQT CCCCHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHCCCCCCCCCCCCCCCCCHHHHHC GHRQDSLALERRAEDGLVRRVFPRLSRARSHWIANALIDLDAPDGTIRAHQVFAVGIRPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEEECCCC ESPDGDRSSTGFRLALIARNQLGHVPRMPRIHPHREQPQRPVALQIDAGPSRQVRALQHR CCCCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH IGNAQRIGTLQCLLGRNRCAGANQCECPQQLHCRSIHTLLPHGGRGFCVTDKPHPALFAS CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH RLGATRGGVIAARRTPQRAQAASAGGQRQRAGSTPRKPTTLAFPARAPRHDRELLR HHCCCCCCEEEECCCCHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCHHHHHCC >Mature Secondary Structure AMRIPAQVGKTVPRSPLHSRQRTTRSPITKEATPAEDGAGFPSIPTAPPPGPGMQLRSK CEECCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC TNKDSSAETRRPKRCITAGSVPPHPGQTGQGHQPDADPAHAPAGRAQRMGTLGQQKQHQN CCCCCCHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC ADGHDARISVARERVSGSLRIDVLHPPVWVVRDDIEQQHPGGVASPRQDGARDPDRFSQT CCCCHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHCCCCCCCCCCCCCCCCCHHHHHC GHRQDSLALERRAEDGLVRRVFPRLSRARSHWIANALIDLDAPDGTIRAHQVFAVGIRPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEEECCCC ESPDGDRSSTGFRLALIARNQLGHVPRMPRIHPHREQPQRPVALQIDAGPSRQVRALQHR CCCCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH IGNAQRIGTLQCLLGRNRCAGANQCECPQQLHCRSIHTLLPHGGRGFCVTDKPHPALFAS CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH RLGATRGGVIAARRTPQRAQAASAGGQRQRAGSTPRKPTTLAFPARAPRHDRELLR HHCCCCCCEEEECCCCHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA