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The map label for this gene is orf88

Identifier: 21242915

GI number: 21242915

Start: 2550969

End: 2551331

Strand: Direct

Name: orf88

Synonym: XAC2180

Alternate gene names: NA

Gene position: 2550969-2551331 (Clockwise)

Preceding gene: 21242913

Following gene: 21242919

Centisome position: 49.29

GC content: 65.56

Gene sequence:

>363_bases
ATGGCTGCCGACTTAGAACCGCTCAGGCCCCCAGCACAACCCAATGCTTCCCTGCCCCACCCTGGCACCGAGCGGTACGC
CGAGCTTCCGCAGTTCCCGAAGGGCTCGCTACTGCCTTTCCGCCGCACGATCCGCCGCCGTGAGCTGCATCAGATCGTGC
CACTGGCGGAGACAACCATCTACGAAATGGAGCAGCGCGGCGAGTTTCCCCGACGCTTCCGGCTGACGCCGCGCTGCGTG
GTCTGGGATCTGGAAGAAGTCGAGGCCTGGATCGAAGGCCGCAAGCAAGCCTCGCGATCCGCAGAGACCGACATATCGCC
CGGGCCGGACGTGAGGTTGCGTCGGCACCGCCCTGTTCGATGA

Upstream 100 bases:

>100_bases
GGGATGTTCCTTTCTACGCCCGGCCTTGCTGCAGCAAGTTGTCGTGATCGCTGGCGATAGCCACCATGACGTTCATTGCG
AACTCCATGGAATCTGGACG

Downstream 100 bases:

>100_bases
AACCGCCATCCGACGGCCACAGCGACTACCCGGCATCCACTCGGATCAGTTCCGCCCCAGGCAGCACCTGTGCCCTCTGG
GCCGCAGCAAGCGTGACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Transcriptional Regulator; Prophage CP4-57 Regulatory; Phage Transcriptional Regulator Alpa; AlpA Family Transcriptional Regulator; Transcriptional Regulator AlpA Family; Regulatory Protein Alpa Family; Prophage Cp4-57 Regulatory

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAADLEPLRPPAQPNASLPHPGTERYAELPQFPKGSLLPFRRTIRRRELHQIVPLAETTIYEMEQRGEFPRRFRLTPRCV
VWDLEEVEAWIEGRKQASRSAETDISPGPDVRLRRHRPVR

Sequences:

>Translated_120_residues
MAADLEPLRPPAQPNASLPHPGTERYAELPQFPKGSLLPFRRTIRRRELHQIVPLAETTIYEMEQRGEFPRRFRLTPRCV
VWDLEEVEAWIEGRKQASRSAETDISPGPDVRLRRHRPVR
>Mature_119_residues
AADLEPLRPPAQPNASLPHPGTERYAELPQFPKGSLLPFRRTIRRRELHQIVPLAETTIYEMEQRGEFPRRFRLTPRCVV
WDLEEVEAWIEGRKQASRSAETDISPGPDVRLRRHRPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14029; Mature: 13898

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADLEPLRPPAQPNASLPHPGTERYAELPQFPKGSLLPFRRTIRRRELHQIVPLAETTI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH
YEMEQRGEFPRRFRLTPRCVVWDLEEVEAWIEGRKQASRSAETDISPGPDVRLRRHRPVR
HHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
AADLEPLRPPAQPNASLPHPGTERYAELPQFPKGSLLPFRRTIRRRELHQIVPLAETTI
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH
YEMEQRGEFPRRFRLTPRCVVWDLEEVEAWIEGRKQASRSAETDISPGPDVRLRRHRPVR
HHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA