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The map label for this gene is ycaC [H]

Identifier: 21242900

GI number: 21242900

Start: 2535065

End: 2535721

Strand: Reverse

Name: ycaC [H]

Synonym: XAC2165

Alternate gene names: 21242900

Gene position: 2535721-2535065 (Counterclockwise)

Preceding gene: 77748633

Following gene: 21242899

Centisome position: 48.99

GC content: 60.88

Gene sequence:

>657_bases
ATGACCACTGCAACTGCCGTACCCGGCACATCCTTGCTATCGCCCGGCGATCACACCCTGATTCTGATCGACCATCAATC
GCAGATGGCGTTCGCCACGCACACCATCGACATTTCGGCGCTGCGCAACAACGTGTCTTTGATTGCAAAGGGCGCCAAAG
GGTTCAAGGTGCCGGTGATCCTGACGACCGTCGCAGAAAAGTCGTTCTCCGGCCCGTTGTTCCCCGAGTTGCCGGACATC
TTTCCCGGCGAGCCGGTATTCGATCGCACCAGCATGAACGCCTGGGAAGACCAGGGGGTAATCGATCGCATCAACGCAAT
CGGCAAGCAGCGTCTGGTGATCGCCGGTCTATGGACCAGTGTGTGCATCGTCGGCCCGACACTGTCGGCGATCGAACAAG
GGTTCGAGGTGTACGTCATCACCGATGCTTGCGGCGACGTGAGCGATGAAGCGCACGAACGTGCAGTCACGCGCATGGTG
CAGGCCGGCGCTGCGCCCATGACCAGTGTGCAGTACCTGCTGGAATTGCAGCGCGACTGGGCACGTGGCGATACCTATGC
GCTGACCACCGGCATCGCACGCGCGCATGCCGGTGGCTATGGCATCGGCATCCAGTACGCCAAGAGCATGTTCGCTGCGC
AGGAAGGCGGGCATTGA

Upstream 100 bases:

>100_bases
TCGCCGCGCAGATGGCGATGGAGCCGTGCGGCGCTGCCCTCATGCCCTCGTCGCAGCGGCGCGGCGGTGAATCGGTTTCA
CTTTCCATGGAGCAACCTGC

Downstream 100 bases:

>100_bases
ACGTATCGGCACCACGTGGCACCGCCGGACTTTCATCAGCGTTGCTGATGCTGCGCATCGCTGGCGGCGGCTTCCTGCTG
CCGCATGGATTGGGCAAGTT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTTATAVPGTSLLSPGDHTLILIDHQSQMAFATHTIDISALRNNVSLIAKGAKGFKVPVILTTVAEKSFSGPLFPELPDI
FPGEPVFDRTSMNAWEDQGVIDRINAIGKQRLVIAGLWTSVCIVGPTLSAIEQGFEVYVITDACGDVSDEAHERAVTRMV
QAGAAPMTSVQYLLELQRDWARGDTYALTTGIARAHAGGYGIGIQYAKSMFAAQEGGH

Sequences:

>Translated_218_residues
MTTATAVPGTSLLSPGDHTLILIDHQSQMAFATHTIDISALRNNVSLIAKGAKGFKVPVILTTVAEKSFSGPLFPELPDI
FPGEPVFDRTSMNAWEDQGVIDRINAIGKQRLVIAGLWTSVCIVGPTLSAIEQGFEVYVITDACGDVSDEAHERAVTRMV
QAGAAPMTSVQYLLELQRDWARGDTYALTTGIARAHAGGYGIGIQYAKSMFAAQEGGH
>Mature_217_residues
TTATAVPGTSLLSPGDHTLILIDHQSQMAFATHTIDISALRNNVSLIAKGAKGFKVPVILTTVAEKSFSGPLFPELPDIF
PGEPVFDRTSMNAWEDQGVIDRINAIGKQRLVIAGLWTSVCIVGPTLSAIEQGFEVYVITDACGDVSDEAHERAVTRMVQ
AGAAPMTSVQYLLELQRDWARGDTYALTTGIARAHAGGYGIGIQYAKSMFAAQEGGH

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=179, Percent_Identity=40.7821229050279, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23261; Mature: 23130

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTATAVPGTSLLSPGDHTLILIDHQSQMAFATHTIDISALRNNVSLIAKGAKGFKVPVI
CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEHHHHHCCEEEEEECCCCCEEEEE
LTTVAEKSFSGPLFPELPDIFPGEPVFDRTSMNAWEDQGVIDRINAIGKQRLVIAGLWTS
EEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHH
VCIVGPTLSAIEQGFEVYVITDACGDVSDEAHERAVTRMVQAGAAPMTSVQYLLELQRDW
HHHHCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ARGDTYALTTGIARAHAGGYGIGIQYAKSMFAAQEGGH
CCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTATAVPGTSLLSPGDHTLILIDHQSQMAFATHTIDISALRNNVSLIAKGAKGFKVPVI
CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEHHHHHCCEEEEEECCCCCEEEEE
LTTVAEKSFSGPLFPELPDIFPGEPVFDRTSMNAWEDQGVIDRINAIGKQRLVIAGLWTS
EEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHH
VCIVGPTLSAIEQGFEVYVITDACGDVSDEAHERAVTRMVQAGAAPMTSVQYLLELQRDW
HHHHCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ARGDTYALTTGIARAHAGGYGIGIQYAKSMFAAQEGGH
CCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]