| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is wzb [C]
Identifier: 21242829
GI number: 21242829
Start: 2438930
End: 2439394
Strand: Direct
Name: wzb [C]
Synonym: XAC2090
Alternate gene names: 21242829
Gene position: 2438930-2439394 (Clockwise)
Preceding gene: 21242828
Following gene: 21242830
Centisome position: 47.12
GC content: 66.88
Gene sequence:
>465_bases ATGAAGGTGCTGATCGTCTGCCTGGGCAATATCTGCCGGTCACCGATGGGCGAGGGTGCCTTGCGTGCGCAACTGGACAA GGCACGGCTGTCGCGGCGCATCGAGGTCGATTCGGCCGGGACCGGGGATTGGCATGCCGGCGATCCGCCGGACCCGCGCG CGATCCGCTGCGCGGGCGGTCACGGCGTGGATATTTCGGGTCTTCGCGCGCGCCAGGTGAAGCACTCGGATGTCGAGCAT TTCGATTGGCTGCTATGCGCAGACGGCAGCAATCTGCGCGATCTGCAGCGGCTGGCCCCGGCAGCGCAGCGCGACAAGCT CGCCTTGTGGCTGCCCTGGGCCGGCATCGACGCGCGCGATGAAATCCCCGACCCGTATACCGGCAGCATGGATGACTTCG AGCAGGTATGGCAGCTGGTCGACACTGCCGCGCGCCTCACCGTTGCCAGACTCACCCGCGGCTAA
Upstream 100 bases:
>100_bases CCGGCTATCGCATCGCCGTGGCGGTGACGCCTGAGCCGTTTCCGCCAGGCATCGATACCGCGGACGATCTCGTTCGCGCG CAGATGCGGGTGGCTTCTGC
Downstream 100 bases:
>100_bases TCGCGCTTGGGCATAATCACCGCATGAACGCCCAGCTCACCCAGGAACTGCCGGAATTTCCCACCTGGCTCAATGCCAGG CCCTCCACCTTGCAGGAGCA
Product: low molecular weight phosphotyrosine protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKVLIVCLGNICRSPMGEGALRAQLDKARLSRRIEVDSAGTGDWHAGDPPDPRAIRCAGGHGVDISGLRARQVKHSDVEH FDWLLCADGSNLRDLQRLAPAAQRDKLALWLPWAGIDARDEIPDPYTGSMDDFEQVWQLVDTAARLTVARLTRG
Sequences:
>Translated_154_residues MKVLIVCLGNICRSPMGEGALRAQLDKARLSRRIEVDSAGTGDWHAGDPPDPRAIRCAGGHGVDISGLRARQVKHSDVEH FDWLLCADGSNLRDLQRLAPAAQRDKLALWLPWAGIDARDEIPDPYTGSMDDFEQVWQLVDTAARLTVARLTRG >Mature_154_residues MKVLIVCLGNICRSPMGEGALRAQLDKARLSRRIEVDSAGTGDWHAGDPPDPRAIRCAGGHGVDISGLRARQVKHSDVEH FDWLLCADGSNLRDLQRLAPAAQRDKLALWLPWAGIDARDEIPDPYTGSMDDFEQVWQLVDTAARLTVARLTRG
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI6005988, Length=138, Percent_Identity=41.304347826087, Blast_Score=112, Evalue=1e-25, Organism=Homo sapiens, GI4757714, Length=138, Percent_Identity=42.0289855072464, Blast_Score=109, Evalue=1e-24, Organism=Homo sapiens, GI96304457, Length=89, Percent_Identity=42.6966292134831, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788375, Length=144, Percent_Identity=35.4166666666667, Blast_Score=82, Evalue=1e-17, Organism=Escherichia coli, GI87081812, Length=151, Percent_Identity=33.7748344370861, Blast_Score=77, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6325330, Length=153, Percent_Identity=30.718954248366, Blast_Score=107, Evalue=9e-25, Organism=Drosophila melanogaster, GI78706766, Length=139, Percent_Identity=39.568345323741, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI78706768, Length=139, Percent_Identity=39.568345323741, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI78706764, Length=126, Percent_Identity=41.2698412698413, Blast_Score=99, Evalue=8e-22, Organism=Drosophila melanogaster, GI78706770, Length=154, Percent_Identity=35.7142857142857, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI78706772, Length=154, Percent_Identity=35.7142857142857, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI78711846, Length=151, Percent_Identity=33.112582781457, Blast_Score=76, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 16950; Mature: 16950
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIVCLGNICRSPMGEGALRAQLDKARLSRRIEVDSAGTGDWHAGDPPDPRAIRCAGG CEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCC HGVDISGLRARQVKHSDVEHFDWLLCADGSNLRDLQRLAPAAQRDKLALWLPWAGIDARD CCCCCCCCHHHHHCCCCCCHHEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCC EIPDPYTGSMDDFEQVWQLVDTAARLTVARLTRG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVLIVCLGNICRSPMGEGALRAQLDKARLSRRIEVDSAGTGDWHAGDPPDPRAIRCAGG CEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCC HGVDISGLRARQVKHSDVEHFDWLLCADGSNLRDLQRLAPAAQRDKLALWLPWAGIDARD CCCCCCCCHHHHHCCCCCCHHEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCC EIPDPYTGSMDDFEQVWQLVDTAARLTVARLTRG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]