| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242822
Identifier: 21242822
GI number: 21242822
Start: 2430130
End: 2431311
Strand: Reverse
Name: 21242822
Synonym: XAC2083
Alternate gene names: NA
Gene position: 2431311-2430130 (Counterclockwise)
Preceding gene: 21242835
Following gene: 21242812
Centisome position: 46.98
GC content: 62.77
Gene sequence:
>1182_bases ATGCATGCCGCGGCAGATCGAGCGGTCAACGGTGCAGCACGCCCTCTGGCCCAGCGTTCGCCCCGATTTCATGGTGTCAC CGCTATGGTGAGATCCATTTTTTCAGGAGCCTCCCCCATGCGTAAAGGCATTGCATTGATCGTCGGTGTGACCGGCATCT CCGGTTACAACCTTGCCAACGTGCTGCTCGCCGACGGCTGGACCGTGTACGGCCTTGCACGTCGGCCACTGCCCCACGAC GGTGTCATTCCGGTGGCCGCCGATCTGCTGGACGCCGAGAGCACGAACAACGCGTTGCGTGGTCTACCGATTACCCACGT GTTCTTCTGCACCTGGACGCGTCGCGATACCGAGCGCGAGAACGTCCAGGCCAACGGCGCGATGATGCGGCACCTGTGCG ATGCGCTCAGCGATGCGCCGCTGCAGCACATGGCGCTGGTCACCGGCACCAAACACTACCTGGGCGCGTTCGAAAATTAC GGCAGCGGCAAGGCCGAGACGCCGTTTCGCGAAAGCGAGCCGCGCCAGCCGGGCGAAAATTTCTACTACACGTTGGAAGA CCTGCTGTTCGCGCATGCCGAGCAGCATGGTTTCGGCTGGAGCGTCCATCGCTCGCACACCATGGTCGGCATGGCCAACG GCAGTAATGCCATGAACATGGGCGTGACGCTGGCGGTATATGCATCGCTGTGCAAGCACACCGGGCAACCGTTCGTGTTC CCAGGGTCGCAAGCGCAATGGAACAGCCTCACCGACCTTACCGATGCCGGGCTGCTTGGCCGCCAACTGGCCTGGGCCGG GCTTAGCCCCGCGGCGCGCAATCAGGCCTTCAACACCGTCAATGGCGATGTATTCCGCTGGCGCTGGATGTGGGGTGAGA TTGCGAAGTTCTTCGAGCTCGACGCTGCGCCCTGCCCCGCTGTGCCGGAACCGCTGGAAGCACGCATGAGCCAGACCGCA CCTGCCCTGTGGGCAGAGGTGGCCGCGCAACACACGTTGGTAGAGTCCGACGTCAACCGGCTTGCATCGTGGTGGCATAC CGATGCCGACCTGGGCCGCGAGATCGAGTGCGTCAACGACATGACCAAGAGCCGTGAATTGGGCTTCCTCGACTTCTACG ACAGCCGCGCCTCGTTCTTCGAACTGTTTACCCGCCTGCGGGCACTGCGCATCATTCCTTGA
Upstream 100 bases:
>100_bases AAGAACACTGCTGCGGCGGTCGCTGATTATGAATACGAGCGACGTCCTGCGGCACGCCGCAATCACTTGATGCGGTGCGT AGCACAGTGCACACGTGAAG
Downstream 100 bases:
>100_bases CCGATGCTGTGGCATCTCCGCAGGCCGCACTGGCCTGCGGAGATCGTGCGGCATGTGCCCTGGCAGTCGCGCTGCATGCG ATCGTTCGCTGCCACTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase/Nucleoside-Diphosphate-Sugar Epimerase; Aldo-Keto Reductase Family Protein; Oxidoreductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short-Chain Dehydrogenase/Reductase Sdr; Short Chain Dehydrogenase Family Protein; NAD Dependent Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MHAAADRAVNGAARPLAQRSPRFHGVTAMVRSIFSGASPMRKGIALIVGVTGISGYNLANVLLADGWTVYGLARRPLPHD GVIPVAADLLDAESTNNALRGLPITHVFFCTWTRRDTERENVQANGAMMRHLCDALSDAPLQHMALVTGTKHYLGAFENY GSGKAETPFRESEPRQPGENFYYTLEDLLFAHAEQHGFGWSVHRSHTMVGMANGSNAMNMGVTLAVYASLCKHTGQPFVF PGSQAQWNSLTDLTDAGLLGRQLAWAGLSPAARNQAFNTVNGDVFRWRWMWGEIAKFFELDAAPCPAVPEPLEARMSQTA PALWAEVAAQHTLVESDVNRLASWWHTDADLGREIECVNDMTKSRELGFLDFYDSRASFFELFTRLRALRIIP
Sequences:
>Translated_393_residues MHAAADRAVNGAARPLAQRSPRFHGVTAMVRSIFSGASPMRKGIALIVGVTGISGYNLANVLLADGWTVYGLARRPLPHD GVIPVAADLLDAESTNNALRGLPITHVFFCTWTRRDTERENVQANGAMMRHLCDALSDAPLQHMALVTGTKHYLGAFENY GSGKAETPFRESEPRQPGENFYYTLEDLLFAHAEQHGFGWSVHRSHTMVGMANGSNAMNMGVTLAVYASLCKHTGQPFVF PGSQAQWNSLTDLTDAGLLGRQLAWAGLSPAARNQAFNTVNGDVFRWRWMWGEIAKFFELDAAPCPAVPEPLEARMSQTA PALWAEVAAQHTLVESDVNRLASWWHTDADLGREIECVNDMTKSRELGFLDFYDSRASFFELFTRLRALRIIP >Mature_393_residues MHAAADRAVNGAARPLAQRSPRFHGVTAMVRSIFSGASPMRKGIALIVGVTGISGYNLANVLLADGWTVYGLARRPLPHD GVIPVAADLLDAESTNNALRGLPITHVFFCTWTRRDTERENVQANGAMMRHLCDALSDAPLQHMALVTGTKHYLGAFENY GSGKAETPFRESEPRQPGENFYYTLEDLLFAHAEQHGFGWSVHRSHTMVGMANGSNAMNMGVTLAVYASLCKHTGQPFVF PGSQAQWNSLTDLTDAGLLGRQLAWAGLSPAARNQAFNTVNGDVFRWRWMWGEIAKFFELDAAPCPAVPEPLEARMSQTA PALWAEVAAQHTLVESDVNRLASWWHTDADLGREIECVNDMTKSRELGFLDFYDSRASFFELFTRLRALRIIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43348; Mature: 43348
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAAADRAVNGAARPLAQRSPRFHGVTAMVRSIFSGASPMRKGIALIVGVTGISGYNLAN CCCCHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCHHH VLLADGWTVYGLARRPLPHDGVIPVAADLLDAESTNNALRGLPITHVFFCTWTRRDTERE HHEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHCCCCEEEEEEEEECCCCCCHH NVQANGAMMRHLCDALSDAPLQHMALVTGTKHYLGAFENYGSGKAETPFRESEPRQPGEN HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC FYYTLEDLLFAHAEQHGFGWSVHRSHTMVGMANGSNAMNMGVTLAVYASLCKHTGQPFVF HHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE PGSQAQWNSLTDLTDAGLLGRQLAWAGLSPAARNQAFNTVNGDVFRWRWMWGEIAKFFEL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHC DAAPCPAVPEPLEARMSQTAPALWAEVAAQHTLVESDVNRLASWWHTDADLGREIECVND CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHH MTKSRELGFLDFYDSRASFFELFTRLRALRIIP HHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHAAADRAVNGAARPLAQRSPRFHGVTAMVRSIFSGASPMRKGIALIVGVTGISGYNLAN CCCCHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCHHH VLLADGWTVYGLARRPLPHDGVIPVAADLLDAESTNNALRGLPITHVFFCTWTRRDTERE HHEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHCCCCEEEEEEEEECCCCCCHH NVQANGAMMRHLCDALSDAPLQHMALVTGTKHYLGAFENYGSGKAETPFRESEPRQPGEN HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC FYYTLEDLLFAHAEQHGFGWSVHRSHTMVGMANGSNAMNMGVTLAVYASLCKHTGQPFVF HHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE PGSQAQWNSLTDLTDAGLLGRQLAWAGLSPAARNQAFNTVNGDVFRWRWMWGEIAKFFEL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHC DAAPCPAVPEPLEARMSQTAPALWAEVAAQHTLVESDVNRLASWWHTDADLGREIECVND CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHH MTKSRELGFLDFYDSRASFFELFTRLRALRIIP HHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA