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The map label for this gene is ygfZ [C]

Identifier: 21242812

GI number: 21242812

Start: 2422412

End: 2423284

Strand: Reverse

Name: ygfZ [C]

Synonym: XAC2074

Alternate gene names: 21242812

Gene position: 2423284-2422412 (Counterclockwise)

Preceding gene: 21242822

Following gene: 21242810

Centisome position: 46.82

GC content: 64.83

Gene sequence:

>873_bases
GTGGCTGACAACCTGAATCTTATTCCGCAGGGTTTTGGCTCCCTGCACGACATGCAATACGTCCGACTGGCCGGTACGGA
TGCAGTGGCGTTTGCGCATGCCCAATTTGCCAACGACGTACAGGCGCTGGCGATCGGGCAGTGGCAGTGGAACGCGTGGC
TGACGGCGAAAGGGCGCGTGATTGCCATCTTCGCACTCCTGCGTGAGGACGACGCACACTTACTGATGCTGTTGCCGGAC
GGCAACGCGGCCGAGATCGCCACGCAACTCAGCCGTTTCGTGTTCCGCCGCAAGCTGAAAATCGGTATTGCCACGCTGTT
TGCCTACGGCGGCTTCGCAGCACCGGAGCACGCGCATGCCGCACGGGCCGAGATCGGAACGCAGCGTATCGAGCTGGATC
TGGGCAGCACCGCGCTGCCGCGCACGTTATTGCTCTACAGCGCGGATGCATTGGCGACGCCTATCGAACTGCCGAGTGCA
GATGCGCAGTGGCGGACGACCGATCTGCAACTGGGGCTCGCCCGCCTGGTCGAGGGCCAGCGCGAACAATGGACGCCGCA
GCAGTTGGCACTGGACCGCCTGCAGGCGTACAGCGTCAAGAAAGGCTGCTACCCGGGCCAGGAAATCGTGGCGCGGACGC
ACTTCCTGGGCAAGGCCAAGCGCGCGTTGCAGTTGCTGGAAACCGATGCTGCCGTGGATGCAGGCGATGCCGTCGCGTTG
GACGGTAGCGCGATCGGCACAGTGGTGAGCGTGGCCGGGAACCTTGCGCTGGCGGTATTGCCGTTGGAGTTGACGCTGGA
CGCCGGTACCGCGTTGCAGGCGGGCAGGCATGGCGCCCGGCCGCGCGCACTTACGACGGGGCTGGAGCGCTAG

Upstream 100 bases:

>100_bases
CCTGAGAAGAAGGCTGCGTCTCGGAATCCTGCGCTGGGGTGGGGGTTGGATGGCCTATCATAGTGCTCTCACAACTTGGC
GATTTTAGTCCTCCCCTTCC

Downstream 100 bases:

>100_bases
CAGCGAAAACCGTCGCGAGCCGTGCCAGGCGGGCGTCGACGTCGTGCAGCACCTCAGTGACAAAGCGACACCCACCGATT
CCGAACGCCCGCCGTGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MADNLNLIPQGFGSLHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLLPD
GNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHAARAEIGTQRIELDLGSTALPRTLLLYSADALATPIELPSA
DAQWRTTDLQLGLARLVEGQREQWTPQQLALDRLQAYSVKKGCYPGQEIVARTHFLGKAKRALQLLETDAAVDAGDAVAL
DGSAIGTVVSVAGNLALAVLPLELTLDAGTALQAGRHGARPRALTTGLER

Sequences:

>Translated_290_residues
MADNLNLIPQGFGSLHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLLPD
GNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHAARAEIGTQRIELDLGSTALPRTLLLYSADALATPIELPSA
DAQWRTTDLQLGLARLVEGQREQWTPQQLALDRLQAYSVKKGCYPGQEIVARTHFLGKAKRALQLLETDAAVDAGDAVAL
DGSAIGTVVSVAGNLALAVLPLELTLDAGTALQAGRHGARPRALTTGLER
>Mature_289_residues
ADNLNLIPQGFGSLHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLLPDG
NAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHAARAEIGTQRIELDLGSTALPRTLLLYSADALATPIELPSAD
AQWRTTDLQLGLARLVEGQREQWTPQQLALDRLQAYSVKKGCYPGQEIVARTHFLGKAKRALQLLETDAAVDAGDAVALD
GSAIGTVVSVAGNLALAVLPLELTLDAGTALQAGRHGARPRALTTGLER

Specific function: Folate-binding protein involved in regulating the level of ATP-dnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA-modifying ygfZ family [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 31115; Mature: 30984

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNLNLIPQGFGSLHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRV
CCCCCCCCCCCCCCHHHCEEEEEECCCHHHHHHHHHHCCCEEEEEECEEEEEEEEECCCE
IAIFALLREDDAHLLMLLPDGNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHA
EEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ARAEIGTQRIELDLGSTALPRTLLLYSADALATPIELPSADAQWRTTDLQLGLARLVEGQ
HHHHHCCEEEEEECCCCCCCCEEEEEECCHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCC
REQWTPQQLALDRLQAYSVKKGCYPGQEIVARTHFLGKAKRALQLLETDAAVDAGDAVAL
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
DGSAIGTVVSVAGNLALAVLPLELTLDAGTALQAGRHGARPRALTTGLER
CCHHHHHHHHHHCCEEEEEEEEEEEECCCCHHHCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
ADNLNLIPQGFGSLHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRV
CCCCCCCCCCCCCHHHCEEEEEECCCHHHHHHHHHHCCCEEEEEECEEEEEEEEECCCE
IAIFALLREDDAHLLMLLPDGNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHA
EEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ARAEIGTQRIELDLGSTALPRTLLLYSADALATPIELPSADAQWRTTDLQLGLARLVEGQ
HHHHHCCEEEEEECCCCCCCCEEEEEECCHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCC
REQWTPQQLALDRLQAYSVKKGCYPGQEIVARTHFLGKAKRALQLLETDAAVDAGDAVAL
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
DGSAIGTVVSVAGNLALAVLPLELTLDAGTALQAGRHGARPRALTTGLER
CCHHHHHHHHHHCCEEEEEEEEEEEECCCCHHHCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA