| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242771
Identifier: 21242771
GI number: 21242771
Start: 2372295
End: 2372825
Strand: Direct
Name: 21242771
Synonym: XAC2027
Alternate gene names: NA
Gene position: 2372295-2372825 (Clockwise)
Preceding gene: 21242770
Following gene: 21242772
Centisome position: 45.84
GC content: 64.03
Gene sequence:
>531_bases ATGGCTGCTTTATCGATCAATCCGGTACGCACCGACGATGAAGGCACGCACATCGTGCGCAGCATGACCATTCGTGCCGA ACCTCACCAGATACTGGATGCCTGGTGTGATGCAAATGTGCAGCAACGCGTGCTGGAAGGCGCCGCCGAGCTGGTCTCCG GCGACGGCCAGGCGTCACGCTGGAAGCTGCATGCACCACTGCATCAGGATGTGGAGGTGACCCTGCGCCGCGCCGATGCG CGGCTGGGCGAGTCGGTGCGTTACGACGCCGAGGGCGAGCATGGGCTGCAACTCACCATCGTATTGCAGGTGCACCCTGC ACGTGGGCGCAAAGCCAGCGAAGCGACGCTAAGTCTGCACTACGCGGTTGAAGGCGTGCTGGCGCAGGTGTTGACCAAGC TGGTGAATCCCGCGCCGTACGTGCTGGCCGGCAAGGGACTACGGCGACTGCGCGCATGGCTGGAAGCCGGCGAGGTGCCG ACCTTGTTGCATACCCCAGCGGCGCGTGCGTCGACGCACGCGCATTCTTAA
Upstream 100 bases:
>100_bases GCTCGAACACCTGCAGACCACGCGCCATCACGTCGCCGATCACCTGAGCACTGCCAAGGCGCTACAGGCCACCGGCAAGA ACGTAGGAGCCCTTTGAGCC
Downstream 100 bases:
>100_bases GGAGGGCTTTTCCATGCGAGCACTTTGCTGGAATGGCGTTAACGATTTGCGCGTGGAAACCGTGCCCGACCCGGCGCTGG TCAACCCACGCGATGTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAALSINPVRTDDEGTHIVRSMTIRAEPHQILDAWCDANVQQRVLEGAAELVSGDGQASRWKLHAPLHQDVEVTLRRADA RLGESVRYDAEGEHGLQLTIVLQVHPARGRKASEATLSLHYAVEGVLAQVLTKLVNPAPYVLAGKGLRRLRAWLEAGEVP TLLHTPAARASTHAHS
Sequences:
>Translated_176_residues MAALSINPVRTDDEGTHIVRSMTIRAEPHQILDAWCDANVQQRVLEGAAELVSGDGQASRWKLHAPLHQDVEVTLRRADA RLGESVRYDAEGEHGLQLTIVLQVHPARGRKASEATLSLHYAVEGVLAQVLTKLVNPAPYVLAGKGLRRLRAWLEAGEVP TLLHTPAARASTHAHS >Mature_175_residues AALSINPVRTDDEGTHIVRSMTIRAEPHQILDAWCDANVQQRVLEGAAELVSGDGQASRWKLHAPLHQDVEVTLRRADAR LGESVRYDAEGEHGLQLTIVLQVHPARGRKASEATLSLHYAVEGVLAQVLTKLVNPAPYVLAGKGLRRLRAWLEAGEVPT LLHTPAARASTHAHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19171; Mature: 19040
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSINPVRTDDEGTHIVRSMTIRAEPHQILDAWCDANVQQRVLEGAAELVSGDGQASR CCCEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCE WKLHAPLHQDVEVTLRRADARLGESVRYDAEGEHGLQLTIVLQVHPARGRKASEATLSLH EEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHH YAVEGVLAQVLTKLVNPAPYVLAGKGLRRLRAWLEAGEVPTLLHTPAARASTHAHS HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure AALSINPVRTDDEGTHIVRSMTIRAEPHQILDAWCDANVQQRVLEGAAELVSGDGQASR CCEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCE WKLHAPLHQDVEVTLRRADARLGESVRYDAEGEHGLQLTIVLQVHPARGRKASEATLSLH EEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHH YAVEGVLAQVLTKLVNPAPYVLAGKGLRRLRAWLEAGEVPTLLHTPAARASTHAHS HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA