| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242770
Identifier: 21242770
GI number: 21242770
Start: 2371719
End: 2372291
Strand: Direct
Name: 21242770
Synonym: XAC2026
Alternate gene names: NA
Gene position: 2371719-2372291 (Clockwise)
Preceding gene: 21242769
Following gene: 21242771
Centisome position: 45.83
GC content: 61.78
Gene sequence:
>573_bases ATGAGCACGCGCCGCCCGATCATTCTTGTCCTGGCCTTGTGCGTTGGCGTTGGCGTATCTGCGCAGGCGCAGAACGCGAC ACAGTCTGCAATGGCCGCTGGGCAGCAAACCGCAGGTGCAGCGACACCTGGCGAGCGCGAGGCGCTCGGCATCTTGAGTG CCATCAACACCAGCGAAGTCAACGCGGCAAATCTGGCATTGCAGAAGCAGGTGCAGGGCGGCGCGCGCGACTACGCCACG CGCATGGTCAAGGAGCATACCGACAACAACCAGAAGATCGCCAAGTGGCAACCGGACACGTCCGCCACGGGGGCAAAGCT GCAAATGACAAAGGGCAAGGCGGAATTGGCCAAGCTGCAGAAGCTGGACGGTCATGCGTTCGAAACCGCCTATATCACCG CGATGGTGAAAGACCACAGCGATGCATTGACGGCGCTCGACAAGAAGCTGATCCCGCAGGCGAAGACTCCGCCGGTGCTC GAACACCTGCAGACCACGCGCCATCACGTCGCCGATCACCTGAGCACTGCCAAGGCGCTACAGGCCACCGGCAAGAACGT AGGAGCCCTTTGA
Upstream 100 bases:
>100_bases GCTGCAGCAGGCGTCCTTCGCCAGGTCTCGACGCTGGCGCGACGATCGAATCACGCAGCGAAGCCCAGCATCGAGCCACA TCATCCAGCTGGAGACTTCC
Downstream 100 bases:
>100_bases GCCATGGCTGCTTTATCGATCAATCCGGTACGCACCGACGATGAAGGCACGCACATCGTGCGCAGCATGACCATTCGTGC CGAACCTCACCAGATACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSTRRPIILVLALCVGVGVSAQAQNATQSAMAAGQQTAGAATPGEREALGILSAINTSEVNAANLALQKQVQGGARDYAT RMVKEHTDNNQKIAKWQPDTSATGAKLQMTKGKAELAKLQKLDGHAFETAYITAMVKDHSDALTALDKKLIPQAKTPPVL EHLQTTRHHVADHLSTAKALQATGKNVGAL
Sequences:
>Translated_190_residues MSTRRPIILVLALCVGVGVSAQAQNATQSAMAAGQQTAGAATPGEREALGILSAINTSEVNAANLALQKQVQGGARDYAT RMVKEHTDNNQKIAKWQPDTSATGAKLQMTKGKAELAKLQKLDGHAFETAYITAMVKDHSDALTALDKKLIPQAKTPPVL EHLQTTRHHVADHLSTAKALQATGKNVGAL >Mature_189_residues STRRPIILVLALCVGVGVSAQAQNATQSAMAAGQQTAGAATPGEREALGILSAINTSEVNAANLALQKQVQGGARDYATR MVKEHTDNNQKIAKWQPDTSATGAKLQMTKGKAELAKLQKLDGHAFETAYITAMVKDHSDALTALDKKLIPQAKTPPVLE HLQTTRHHVADHLSTAKALQATGKNVGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20021; Mature: 19890
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRRPIILVLALCVGVGVSAQAQNATQSAMAAGQQTAGAATPGEREALGILSAINTSEV CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC NAANLALQKQVQGGARDYATRMVKEHTDNNQKIAKWQPDTSATGAKLQMTKGKAELAKLQ HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHH KLDGHAFETAYITAMVKDHSDALTALDKKLIPQAKTPPVLEHLQTTRHHVADHLSTAKAL HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QATGKNVGAL HHCCCCCCCC >Mature Secondary Structure STRRPIILVLALCVGVGVSAQAQNATQSAMAAGQQTAGAATPGEREALGILSAINTSEV CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC NAANLALQKQVQGGARDYATRMVKEHTDNNQKIAKWQPDTSATGAKLQMTKGKAELAKLQ HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHH KLDGHAFETAYITAMVKDHSDALTALDKKLIPQAKTPPVLEHLQTTRHHVADHLSTAKAL HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QATGKNVGAL HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA