| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21242751
Identifier: 21242751
GI number: 21242751
Start: 2344396
End: 2346324
Strand: Direct
Name: 21242751
Synonym: XAC2007
Alternate gene names: NA
Gene position: 2344396-2346324 (Clockwise)
Preceding gene: 21242750
Following gene: 21242752
Centisome position: 45.3
GC content: 64.23
Gene sequence:
>1929_bases ATGTTGCATCGTCCCTCGTTAGTGCTCGTGCTGCTCCTCTGTATTCCGCTGCTTGCCCAGGCACAGCAACGGCCCGCACC CGCTGCCAGCGCTGCAACACGCACGCAGGCCGACACCAATTACAGTTTCGTGCGCTACCGCGCCGACTACGAGGTGCGCG CAGACGCCAGCAGCGTTGAAACCGACGAGTACGAGATCCTGCTCAAGACCAAGTCGGCCGTGGAGCAGTTCAGCCAGGTC CGGTTGAGCTATAGCGAGAAGATGGAAACGCTCGAAGTGCTGCAGGCGTATACCGTCACGGCCGAAGGGCTGCGCCAGGA CGTGGCGGCCGACAAGATCTATACCCAGGAAAGCTATTCCAGCGCCTCGGCAGCGATGTATGCCGACCGCAAGGTGAAAG TGGTGGTGTTCCCGAATCTGGCGCCGGGCGCGCGCATTGTGTACCGCGTGCGGCGGGCGCAGAACACGCCGTATTTCCCC GGTTACTTCAGCCTGTGGGAGACCTTCAGCGTGTTCGCGCAGTACGACGATGCCGTGATTACGTTGGTCGCGCCCAAGGG TCTGCCGATGCATCTTTCTGCACGCGGGCTGCAGGGCGGCACCAAGCCAGTGGTGCGCGGCGACCAGGCACGCTGGGAGT GGCGCTACCAGCGCAGCGCGCCGATGAAGAACCAGAACTGGAGCGCGGCCACCTGGGAGTTCAGCCCGACCTTGATGGCC AGCACCTTCGATAGCTGGTCGCAGATGGGCCTGGCTTACCACGTCAAAGGCGGGCGCGCCGCGGCGGTGACGCCGGCGAT CCAGGCGCTGGCCGATGAGGTCACGCGCGGTATCGATGCGCCGCGCGCGCAGGCTGCCGCGCTGTATGCATGGGTGGCGC GCAATATCCGCTATGTGGCGGTGTATCTGGGCAATGGCGGGCTGGAACCCAACAGCGCAGAGAGCATCCTGGCCAACCAT TACGGCGATTGCAAAGACCACACCGTAATTCTGGAGGCCCTGCTTGCGGCCAAGGGAATTGCCAGCACACCGGTGCTGAT CGGGGCAGAGGGTGGCCCGACCTTGCCGGAAATCCCGGTGCTGGGCCGCTTCAATCACGCCATCACCTACATTCCCGCAT TCGATCTGTACGTGGACTCGACCAACCCCTACGCGCGCTTCGGCCAGTTGCCGGCCGGCGATCTCGGCGCGCCGGTGGTG CATACGCGCGATGGCAAGGTCACGCAGACGCCGCCGAACGACCGCAAGGTCAATCGCTATGTCGCCCGCACCGACTACCG GTTCACGCCGCAGGGCGATCTGCAGGGCACCACCACGCTCGACAGCGGGCAGACCGGCGAAGTGGGCTTGCGCGCGATGT TCGTGCAGCTCAATGCGCAGAATCGCAACCGGATCGAAGGGTCGATCCTTGCCCAGTCCGGTTTCGACGGCACCGGCGAT CTGCTGATTCAGGGCGACCCGCTGGATCTGGATGCACCGTTCAACTACCGCTACACCTTCCAGGCCAAGGACGCGGTGGA TTTCTCGGTGGTCGGCGGCATGACCTTGCCGGACATGCCCGGCGCCGAGTCAACGCGCGCCATCTACACCACCACCTCGG CCGAAAACAATCTGACCCCGTTTTACTGCAACGACAGCGTGCGCGAGGAAACCTACGTGGTGACCTTTCCCGAGACGGTG CCGATCATCGCCATTCCGCGCAGCAGCACCTTTCGCAATGCCGCCGGCCAATACCAGGCTGAGTGGACACGGCAGGGACA GACGGTCACCGCCGTGCATCGCCTGCAGCGCGCCGCCGTGCGCGGGCCTCAGGCGCTGTGCCAGCCGCAGGATTACCGTG CGTTTCGCGAACTCTATCAACAGGTGAGGCGCGGCTTTCGTGGGCAGATCGTCTATGGCGATCTGACCAGGGTGCAGACG GCACAATGA
Upstream 100 bases:
>100_bases TGCAGCAATGCCGCATTGTTGGAAGTCCGTGCCTGTCATTGCCGGGCACAACGGCTACCCTGTGGGCGAGGGCCGCTCCG GCCCGCCGTGATCGAGACCC
Downstream 100 bases:
>100_bases GGCGGATTGCCGCGCACACGCTGCCATCTGAACACGTCGTGCGATAGCGCTCGCCCATTCATCTATGAAGTATCAGAATC TACGCATTCCCTTCTGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Transmembrane Protein; Transglutaminase-Like; Secreted Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Protein; Transglutaminase Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MLHRPSLVLVLLLCIPLLAQAQQRPAPAASAATRTQADTNYSFVRYRADYEVRADASSVETDEYEILLKTKSAVEQFSQV RLSYSEKMETLEVLQAYTVTAEGLRQDVAADKIYTQESYSSASAAMYADRKVKVVVFPNLAPGARIVYRVRRAQNTPYFP GYFSLWETFSVFAQYDDAVITLVAPKGLPMHLSARGLQGGTKPVVRGDQARWEWRYQRSAPMKNQNWSAATWEFSPTLMA STFDSWSQMGLAYHVKGGRAAAVTPAIQALADEVTRGIDAPRAQAAALYAWVARNIRYVAVYLGNGGLEPNSAESILANH YGDCKDHTVILEALLAAKGIASTPVLIGAEGGPTLPEIPVLGRFNHAITYIPAFDLYVDSTNPYARFGQLPAGDLGAPVV HTRDGKVTQTPPNDRKVNRYVARTDYRFTPQGDLQGTTTLDSGQTGEVGLRAMFVQLNAQNRNRIEGSILAQSGFDGTGD LLIQGDPLDLDAPFNYRYTFQAKDAVDFSVVGGMTLPDMPGAESTRAIYTTTSAENNLTPFYCNDSVREETYVVTFPETV PIIAIPRSSTFRNAAGQYQAEWTRQGQTVTAVHRLQRAAVRGPQALCQPQDYRAFRELYQQVRRGFRGQIVYGDLTRVQT AQ
Sequences:
>Translated_642_residues MLHRPSLVLVLLLCIPLLAQAQQRPAPAASAATRTQADTNYSFVRYRADYEVRADASSVETDEYEILLKTKSAVEQFSQV RLSYSEKMETLEVLQAYTVTAEGLRQDVAADKIYTQESYSSASAAMYADRKVKVVVFPNLAPGARIVYRVRRAQNTPYFP GYFSLWETFSVFAQYDDAVITLVAPKGLPMHLSARGLQGGTKPVVRGDQARWEWRYQRSAPMKNQNWSAATWEFSPTLMA STFDSWSQMGLAYHVKGGRAAAVTPAIQALADEVTRGIDAPRAQAAALYAWVARNIRYVAVYLGNGGLEPNSAESILANH YGDCKDHTVILEALLAAKGIASTPVLIGAEGGPTLPEIPVLGRFNHAITYIPAFDLYVDSTNPYARFGQLPAGDLGAPVV HTRDGKVTQTPPNDRKVNRYVARTDYRFTPQGDLQGTTTLDSGQTGEVGLRAMFVQLNAQNRNRIEGSILAQSGFDGTGD LLIQGDPLDLDAPFNYRYTFQAKDAVDFSVVGGMTLPDMPGAESTRAIYTTTSAENNLTPFYCNDSVREETYVVTFPETV PIIAIPRSSTFRNAAGQYQAEWTRQGQTVTAVHRLQRAAVRGPQALCQPQDYRAFRELYQQVRRGFRGQIVYGDLTRVQT AQ >Mature_642_residues MLHRPSLVLVLLLCIPLLAQAQQRPAPAASAATRTQADTNYSFVRYRADYEVRADASSVETDEYEILLKTKSAVEQFSQV RLSYSEKMETLEVLQAYTVTAEGLRQDVAADKIYTQESYSSASAAMYADRKVKVVVFPNLAPGARIVYRVRRAQNTPYFP GYFSLWETFSVFAQYDDAVITLVAPKGLPMHLSARGLQGGTKPVVRGDQARWEWRYQRSAPMKNQNWSAATWEFSPTLMA STFDSWSQMGLAYHVKGGRAAAVTPAIQALADEVTRGIDAPRAQAAALYAWVARNIRYVAVYLGNGGLEPNSAESILANH YGDCKDHTVILEALLAAKGIASTPVLIGAEGGPTLPEIPVLGRFNHAITYIPAFDLYVDSTNPYARFGQLPAGDLGAPVV HTRDGKVTQTPPNDRKVNRYVARTDYRFTPQGDLQGTTTLDSGQTGEVGLRAMFVQLNAQNRNRIEGSILAQSGFDGTGD LLIQGDPLDLDAPFNYRYTFQAKDAVDFSVVGGMTLPDMPGAESTRAIYTTTSAENNLTPFYCNDSVREETYVVTFPETV PIIAIPRSSTFRNAAGQYQAEWTRQGQTVTAVHRLQRAAVRGPQALCQPQDYRAFRELYQQVRRGFRGQIVYGDLTRVQT AQ
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70848; Mature: 70848
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHRPSLVLVLLLCIPLLAQAQQRPAPAASAATRTQADTNYSFVRYRADYEVRADASSVE CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCEEECCCCCCC TDEYEILLKTKSAVEQFSQVRLSYSEKMETLEVLQAYTVTAEGLRQDVAADKIYTQESYS CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SASAAMYADRKVKVVVFPNLAPGARIVYRVRRAQNTPYFPGYFSLWETFSVFAQYDDAVI CCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEE TLVAPKGLPMHLSARGLQGGTKPVVRGDQARWEWRYQRSAPMKNQNWSAATWEFSPTLMA EEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHH STFDSWSQMGLAYHVKGGRAAAVTPAIQALADEVTRGIDAPRAQAAALYAWVARNIRYVA HHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEE VYLGNGGLEPNSAESILANHYGDCKDHTVILEALLAAKGIASTPVLIGAEGGPTLPEIPV EEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC LGRFNHAITYIPAFDLYVDSTNPYARFGQLPAGDLGAPVVHTRDGKVTQTPPNDRKVNRY CCCCCCEEEEEEEEEEEEECCCCHHHHCCCCCCCCCCCEEECCCCEEECCCCCCCHHHHE VARTDYRFTPQGDLQGTTTLDSGQTGEVGLRAMFVQLNAQNRNRIEGSILAQSGFDGTGD EEECCCEECCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCC LLIQGDPLDLDAPFNYRYTFQAKDAVDFSVVGGMTLPDMPGAESTRAIYTTTSAENNLTP EEEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC FYCNDSVREETYVVTFPETVPIIAIPRSSTFRNAAGQYQAEWTRQGQTVTAVHRLQRAAV EEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH RGPQALCQPQDYRAFRELYQQVRRGFRGQIVYGDLTRVQTAQ CCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MLHRPSLVLVLLLCIPLLAQAQQRPAPAASAATRTQADTNYSFVRYRADYEVRADASSVE CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCEEECCCCCCC TDEYEILLKTKSAVEQFSQVRLSYSEKMETLEVLQAYTVTAEGLRQDVAADKIYTQESYS CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SASAAMYADRKVKVVVFPNLAPGARIVYRVRRAQNTPYFPGYFSLWETFSVFAQYDDAVI CCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEE TLVAPKGLPMHLSARGLQGGTKPVVRGDQARWEWRYQRSAPMKNQNWSAATWEFSPTLMA EEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHH STFDSWSQMGLAYHVKGGRAAAVTPAIQALADEVTRGIDAPRAQAAALYAWVARNIRYVA HHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEE VYLGNGGLEPNSAESILANHYGDCKDHTVILEALLAAKGIASTPVLIGAEGGPTLPEIPV EEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC LGRFNHAITYIPAFDLYVDSTNPYARFGQLPAGDLGAPVVHTRDGKVTQTPPNDRKVNRY CCCCCCEEEEEEEEEEEEECCCCHHHHCCCCCCCCCCCEEECCCCEEECCCCCCCHHHHE VARTDYRFTPQGDLQGTTTLDSGQTGEVGLRAMFVQLNAQNRNRIEGSILAQSGFDGTGD EEECCCEECCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCC LLIQGDPLDLDAPFNYRYTFQAKDAVDFSVVGGMTLPDMPGAESTRAIYTTTSAENNLTP EEEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC FYCNDSVREETYVVTFPETVPIIAIPRSSTFRNAAGQYQAEWTRQGQTVTAVHRLQRAAV EEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH RGPQALCQPQDYRAFRELYQQVRRGFRGQIVYGDLTRVQTAQ CCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA