| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cheV [H]
Identifier: 21242731
GI number: 21242731
Start: 2319009
End: 2319953
Strand: Reverse
Name: cheV [H]
Synonym: XAC1987
Alternate gene names: 21242731
Gene position: 2319953-2319009 (Counterclockwise)
Preceding gene: 21242736
Following gene: 21242730
Centisome position: 44.83
GC content: 65.19
Gene sequence:
>945_bases ATGACCCACGATCTGCTCAACCGCATCGACCAGCGCACCCGACTGGCTGGCCACAATCGACTGGCCCTGCTGCTGTTCCG GCTGGGCGGACGCCAGCTTTTTGGCGTCAACGTCTTCAAGGTGCAGGAAGTGCTGCGCCGGCCGGAACTGTTCCAGGTGC CTGGCTTGCCGACCGAGTTCGCCGGCGTGGCCGACGTGCGCGGGCGCTCGGTGCCGGTGCTGGATCTGGGCCTGGCCATC GGCCACCCGGAACGCGACTCGCATTCGGAAAACGGTCCCGGCTATCTGGTCGTTGCCGAGTTCAACCGCTCGGTCCAGGG CTTCTTGGTCAGCGGAGTGGAGCGCATCGTCAATATCGCGGTGGAAGATATCCACCCGCCGCCGGAACTGGGCGCCGAAG CCACTTATTTGACGGCGGTGACGCGCTTCCAGGGCGAACTGATCCAGGTCATCGACGTGGAGAGCGTGCTGGCCGATATC GCCAAGGTCAGCAAGGACGTGCAACTGGATCCCTCGCTGCAGCTGGTGGCCTACGACCGCCAGTTCCAGGTGCTGGTGGT GGACGATTCGCGCGTGGCGCGCCAGCAGATCCGCAGCGTGCTCGACCAGTTGGGCGTTTCGGCGACCCTGCTGTCGGACG GCCGCCAGGCGCTGGACCACCTGCTGCAGGTGGCTGCCTCGGGCGAAAACCCGGCCGACCGCTACGCCATGGTGATCTCC GACATCGAGATGCCGGCAATGGACGGTTATACGCTGACGACGGAAATCCGGCGCACCCCGGGCCTGCAAGGCCTGTATGT GCTGTTGCACACCTCCTTGTCGGGCGTGTTCAACAACGCCATGGTCGAGCAGGTGGGCGCGAACGCCTTCGTGGCCAAGT ACAGCGCCAATGAACTGGCCGACTATGTGCTGGCCCGCCTGAAAGTGGTCGCCGAAGCGGCCTGA
Upstream 100 bases:
>100_bases CCTAATGCCTTTGCGATTCCCCATTCCCCATTCCCGACAGCGCCCCACGCCAACCGTAAAACCACTCAAGTTTTCCAAGG GCGCTGTCGATATCTGCCCC
Downstream 100 bases:
>100_bases TCATACGTTCGGGCCGTGCAGTCGCTGAGCCGCGGGCGGACATCTCCCGCGCCTGTTCCCCGCACAAGGGCGCCTGGTGG CGGAATTGCGGCGGCGTGAG
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTHDLLNRIDQRTRLAGHNRLALLLFRLGGRQLFGVNVFKVQEVLRRPELFQVPGLPTEFAGVADVRGRSVPVLDLGLAI GHPERDSHSENGPGYLVVAEFNRSVQGFLVSGVERIVNIAVEDIHPPPELGAEATYLTAVTRFQGELIQVIDVESVLADI AKVSKDVQLDPSLQLVAYDRQFQVLVVDDSRVARQQIRSVLDQLGVSATLLSDGRQALDHLLQVAASGENPADRYAMVIS DIEMPAMDGYTLTTEIRRTPGLQGLYVLLHTSLSGVFNNAMVEQVGANAFVAKYSANELADYVLARLKVVAEAA
Sequences:
>Translated_314_residues MTHDLLNRIDQRTRLAGHNRLALLLFRLGGRQLFGVNVFKVQEVLRRPELFQVPGLPTEFAGVADVRGRSVPVLDLGLAI GHPERDSHSENGPGYLVVAEFNRSVQGFLVSGVERIVNIAVEDIHPPPELGAEATYLTAVTRFQGELIQVIDVESVLADI AKVSKDVQLDPSLQLVAYDRQFQVLVVDDSRVARQQIRSVLDQLGVSATLLSDGRQALDHLLQVAASGENPADRYAMVIS DIEMPAMDGYTLTTEIRRTPGLQGLYVLLHTSLSGVFNNAMVEQVGANAFVAKYSANELADYVLARLKVVAEAA >Mature_313_residues THDLLNRIDQRTRLAGHNRLALLLFRLGGRQLFGVNVFKVQEVLRRPELFQVPGLPTEFAGVADVRGRSVPVLDLGLAIG HPERDSHSENGPGYLVVAEFNRSVQGFLVSGVERIVNIAVEDIHPPPELGAEATYLTAVTRFQGELIQVIDVESVLADIA KVSKDVQLDPSLQLVAYDRQFQVLVVDDSRVARQQIRSVLDQLGVSATLLSDGRQALDHLLQVAASGENPADRYAMVISD IEMPAMDGYTLTTEIRRTPGLQGLYVLLHTSLSGVFNNAMVEQVGANAFVAKYSANELADYVLARLKVVAEAA
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 34315; Mature: 34184
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHDLLNRIDQRTRLAGHNRLALLLFRLGGRQLFGVNVFKVQEVLRRPELFQVPGLPTEF CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCHHHHHHHHHCCCCEEECCCCCHHH AGVADVRGRSVPVLDLGLAIGHPERDSHSENGPGYLVVAEFNRSVQGFLVSGVERIVNIA CCHHHCCCCCCCEEEEHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH VEDIHPPPELGAEATYLTAVTRFQGELIQVIDVESVLADIAKVSKDVQLDPSLQLVAYDR HHCCCCCCCCCCCHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHCCCCCCCCEEEEEECC QFQVLVVDDSRVARQQIRSVLDQLGVSATLLSDGRQALDHLLQVAASGENPADRYAMVIS EEEEEEECCHHHHHHHHHHHHHHHCCEEEHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC DIEMPAMDGYTLTTEIRRTPGLQGLYVLLHTSLSGVFNNAMVEQVGANAFVAKYSANELA CCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH DYVLARLKVVAEAA HHHHHHHHHHHHCC >Mature Secondary Structure THDLLNRIDQRTRLAGHNRLALLLFRLGGRQLFGVNVFKVQEVLRRPELFQVPGLPTEF CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCHHHHHHHHHCCCCEEECCCCCHHH AGVADVRGRSVPVLDLGLAIGHPERDSHSENGPGYLVVAEFNRSVQGFLVSGVERIVNIA CCHHHCCCCCCCEEEEHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH VEDIHPPPELGAEATYLTAVTRFQGELIQVIDVESVLADIAKVSKDVQLDPSLQLVAYDR HHCCCCCCCCCCCHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHCCCCCCCCEEEEEECC QFQVLVVDDSRVARQQIRSVLDQLGVSATLLSDGRQALDHLLQVAASGENPADRYAMVIS EEEEEEECCHHHHHHHHHHHHHHHCCEEEHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC DIEMPAMDGYTLTTEIRRTPGLQGLYVLLHTSLSGVFNNAMVEQVGANAFVAKYSANELA CCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH DYVLARLKVVAEAA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]