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The map label for this gene is fliP [H]

Identifier: 21242688

GI number: 21242688

Start: 2276257

End: 2277045

Strand: Reverse

Name: fliP [H]

Synonym: XAC1944

Alternate gene names: 21242688

Gene position: 2277045-2276257 (Counterclockwise)

Preceding gene: 21242689

Following gene: 21242686

Centisome position: 44.0

GC content: 65.78

Gene sequence:

>789_bases
GTGATGAGTTGCCCGCTGCTGGCCGCGGCCAGCCCGGCCGCGCTGCCGGCAATGGCGCAGGCCGCGGCACCGGCGGCGAC
CCCTGCCGCGGTACCGGCCGGTTCCAACCAGTTGCCGTCGCTGCCGAACGTGAGCGTGGGCCGCATCGGCGACCAGCCCG
TGAGCCTGCCGCTGCAGACCTTGCTGCTGATGACGGCGATCACCCTGCTGCCGTCGATGCTGCTGGTGTTGACCGCCTTC
ACCCGCATCACCATCGTGCTGGGCCTGCTGCGCCAGGCGCTGGGCACCGGCCAGACCCCGTCCAACCAGGTGCTGCTGGG
CCTGGCGATGTTCCTGACCGCGCTGGTGATGATGCCGGTGTGGCAGAAGATGTGGGGCGCCGGGCTACAGCCGTACCTCA
ACAACCAGATCGATTTTTCCACTGCCTGGACGCTCACCACGCAGCCGCTGCGCGCTTTCATGCTGGCGCAGATCCGCGAG
ACCGATCTGATGACCTTCGCCGGCATGGCCGGCGACGGCAAGTACGCCGGCCCGGACGCGGTACCATTCCCGGTGCTGGT
GGCCTCGTTCGTGACCAGCGAGCTGAAGACCGCTTTCGAAATCGGCTTTCTGATCTTCATCCCGTTCGTGATCATCGACT
TGGTGGTGGCCAGCGTGCTGATGTCGATGGGCATGATGATGCTGTCGCCGATGCTGATCTCCGCGCCGTTCAAGATTCTG
TTGTTCATCCTGGTGGATGGTTGGGTGCTGGTGGTGGGGACGCTGGCTGCGAGCTTTAACGCGTCGTAG

Upstream 100 bases:

>100_bases
TTCGCCCAGCTGCTCGCCCAGAAGCTGCGCAAGGACCCGTGACATGTTGAGCCGTTGGAATCGTTGGGGGCGCAGTGTGC
GCCTGGTGCTGATCCTGCTG

Downstream 100 bases:

>100_bases
GGGTGGCGTGCGTTGCGCGCTGTAGCACTTGCCAGCCGGTTGAGTGTGTTTGTTGGAGCCGCCGCACAGCACAGCTGTAG
TGCCCAGGCGCTTGCGGCTT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSLPNVSVGRIGDQPVSLPLQTLLLMTAITLLPSMLLVLTAF
TRITIVLGLLRQALGTGQTPSNQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFSTAWTLTTQPLRAFMLAQIRE
TDLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLMSMGMMMLSPMLISAPFKIL
LFILVDGWVLVVGTLAASFNAS

Sequences:

>Translated_262_residues
MMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSLPNVSVGRIGDQPVSLPLQTLLLMTAITLLPSMLLVLTAF
TRITIVLGLLRQALGTGQTPSNQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFSTAWTLTTQPLRAFMLAQIRE
TDLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLMSMGMMMLSPMLISAPFKIL
LFILVDGWVLVVGTLAASFNAS
>Mature_262_residues
MMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSLPNVSVGRIGDQPVSLPLQTLLLMTAITLLPSMLLVLTAF
TRITIVLGLLRQALGTGQTPSNQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFSTAWTLTTQPLRAFMLAQIRE
TDLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLMSMGMMMLSPMLISAPFKIL
LFILVDGWVLVVGTLAASFNAS

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=212, Percent_Identity=56.6037735849057, Blast_Score=232, Evalue=2e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27641; Mature: 27641

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]