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The map label for this gene is 21242668

Identifier: 21242668

GI number: 21242668

Start: 2249955

End: 2250263

Strand: Reverse

Name: 21242668

Synonym: XAC1924

Alternate gene names: NA

Gene position: 2250263-2249955 (Counterclockwise)

Preceding gene: 21242669

Following gene: 21242665

Centisome position: 43.48

GC content: 61.81

Gene sequence:

>309_bases
GTGCAACACCCGATCCATGGGCGGCGCGGCCGCGCCAGGCCATGGGTCGGCAGTGCGGACGGGCGGCCATGTGACCGACC
AGGTGCCGCGCCAAATCAGAATGCCTTCATCGAGCGCTTCAATCGCACGTTCCGCGAGGAAGTGCTCGACCTGAATCTCT
TCGCCTGCCTCGACGAGGTGCGCGAAGCCGCCCACTGGTGGATGATCGACTACAACCAAGCAAGATCCCATGATTCGCTC
GGCGGAATGACCCCGGTCGAGTACCGCAACAAGTACGCCGAAAGCTCTACTTTTGAACTGCCTGCTTGA

Upstream 100 bases:

>100_bases
GTCTTGGTCGCTTTACGGCGCGCATCTCAGCGCAAACGTGTTGCCATCGCGCAGATCATCGAATTGTTGACGGGCTGAGC
CGCGCGGTGCGGCGCCCGCG

Downstream 100 bases:

>100_bases
CGGGGGAGCTTACGCAATGGCGGGCGACTAGCGGGTGGGAAGTGAATTTGCCCCGTTTCCTGCAGAGTTTCCTTAGCAGA
TGACATCGATGCTGTAAAAC

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Transposase; ISxac4 Transposase; Transposase Fragment; ISxcC1 Transposase; Isxcc1 Transposase Orfb Protein; Integrase Core Domain Protein; Transposase OrfB; IS3 Family Element Transposase OrfB; ISxcc1 Transposase ORFB Fragment; Transposase OrfB For Insertion Sequence Element

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MQHPIHGRRGRARPWVGSADGRPCDRPGAAPNQNAFIERFNRTFREEVLDLNLFACLDEVREAAHWWMIDYNQARSHDSL
GGMTPVEYRNKYAESSTFELPA

Sequences:

>Translated_102_residues
MQHPIHGRRGRARPWVGSADGRPCDRPGAAPNQNAFIERFNRTFREEVLDLNLFACLDEVREAAHWWMIDYNQARSHDSL
GGMTPVEYRNKYAESSTFELPA
>Mature_102_residues
MQHPIHGRRGRARPWVGSADGRPCDRPGAAPNQNAFIERFNRTFREEVLDLNLFACLDEVREAAHWWMIDYNQARSHDSL
GGMTPVEYRNKYAESSTFELPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11760; Mature: 11760

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHPIHGRRGRARPWVGSADGRPCDRPGAAPNQNAFIERFNRTFREEVLDLNLFACLDEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAAHWWMIDYNQARSHDSLGGMTPVEYRNKYAESSTFELPA
HHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQHPIHGRRGRARPWVGSADGRPCDRPGAAPNQNAFIERFNRTFREEVLDLNLFACLDEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAAHWWMIDYNQARSHDSLGGMTPVEYRNKYAESSTFELPA
HHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA