| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242657
Identifier: 21242657
GI number: 21242657
Start: 2238555
End: 2239709
Strand: Direct
Name: 21242657
Synonym: XAC1913
Alternate gene names: NA
Gene position: 2238555-2239709 (Clockwise)
Preceding gene: 21242656
Following gene: 21242658
Centisome position: 43.25
GC content: 55.67
Gene sequence:
>1155_bases ATGGCGTCCTATCTGCAGTTCGGCCACGATTCCTGGAACCTCCTAGAGGAAGCTGACATCGGCGCCTATACCGGGCTAAT CCTCAGCCCGGTCAACGATGGACCTACAGACGTTCAAACTCGACTTGCTCGCCTAGGTACTCTGCGCGATAGGCTTGAGG TGATCCTTGACCCGCAAATGTATAACCCTGCGGTCGAAAAAGGAAAGATGGACCAATGGTCCTACTTTCCGGCCGATTTT GCGACAGCCGATCATGCAGATATCGGCTGGTGGACAACGCGCACGCGCGCGATTGTTGATGAAGGAGCCCGTCTCGGCGT AGATGCGGTGTGCTCCCCAGCGTTGTTTCCGAGAGCATTTACGGACGACTATTACTCCTTGATGGTAGAGGTCGCTGACG CGACTAAGCAGTACGCAGATCAGCATGAAATCCAGACGATGCTGACAGCCGTAGTGAGCTTGCGTGACCTCGCGAACCCA ACAAGGGCGATGGCTATCGCATCGATCCTTTCGCGAAGTTCCTGCGAACGCGTCTACCTCACGTTTGTAAATGAGGATGT GCCACCACGTGAGCCCCTGAAGGATGGCGCTGGCATTCCCACTGCCGTGCATCTTGTGCGTCTCCTTTCTGCGGAGATGC GAGTGCATGTTGCCTTCGTGAGTCATGACTTGATTCTGTGGAAGCTCGCTGGAGCAACCGACATCTCCACAGGAAAATTC ATGAATCTACGGCGCTTCTCCCCTGGGCGATGGCAGGACGAAGAAGCTGGGGGACGGCAAGTGGCCTATTGGAACGAAGG GCCCTTGCTAGCTCGATTGCGGGAGGCTGACGTGGCGTTGCTACTTCGTCATGGATGGTTCGAAGGCAGGGATATGTCCG GCAACCCATCGGAAGCGCGAATCTTGGAAATCATCCGCGGTGGTACTCGTACTGCCTGGCTGAAGCTATCCTGGATGCAG TACCTGCGATGGGCTAGTAACATGGAAGCTCTATGGCACGGCAATCCCACTCTCGCTGAGGCCTCGTTGGACACCGCTGA CCGGAATTGGAGTGAGATTGTCGACCGACGGAAGCTCCTCTTCCAAGATAGATTCAATAACGGTGACCATGTCCGCGCAT GGATGAATGCCGTTCGGGAAAGCCGAATTCGGTGA
Upstream 100 bases:
>100_bases GTTCGGCTGCATAACTAGGGCGCTCAAACCGTGGCCCGTTTCCAGATACCGCAGGCCTTCCGATTTCATCAAATCATTGA CCCAAGCCTAGGAGAAATCA
Downstream 100 bases:
>100_bases AGTGGAACTTGTATTTAAGTGACATCCAATGGTTAAGAAGTAACGGCTCGAAGTAACGGTTCCAGGTTCACTTCCACTGC AGCCTGGCAGTCGCCAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MASYLQFGHDSWNLLEEADIGAYTGLILSPVNDGPTDVQTRLARLGTLRDRLEVILDPQMYNPAVEKGKMDQWSYFPADF ATADHADIGWWTTRTRAIVDEGARLGVDAVCSPALFPRAFTDDYYSLMVEVADATKQYADQHEIQTMLTAVVSLRDLANP TRAMAIASILSRSSCERVYLTFVNEDVPPREPLKDGAGIPTAVHLVRLLSAEMRVHVAFVSHDLILWKLAGATDISTGKF MNLRRFSPGRWQDEEAGGRQVAYWNEGPLLARLREADVALLLRHGWFEGRDMSGNPSEARILEIIRGGTRTAWLKLSWMQ YLRWASNMEALWHGNPTLAEASLDTADRNWSEIVDRRKLLFQDRFNNGDHVRAWMNAVRESRIR
Sequences:
>Translated_384_residues MASYLQFGHDSWNLLEEADIGAYTGLILSPVNDGPTDVQTRLARLGTLRDRLEVILDPQMYNPAVEKGKMDQWSYFPADF ATADHADIGWWTTRTRAIVDEGARLGVDAVCSPALFPRAFTDDYYSLMVEVADATKQYADQHEIQTMLTAVVSLRDLANP TRAMAIASILSRSSCERVYLTFVNEDVPPREPLKDGAGIPTAVHLVRLLSAEMRVHVAFVSHDLILWKLAGATDISTGKF MNLRRFSPGRWQDEEAGGRQVAYWNEGPLLARLREADVALLLRHGWFEGRDMSGNPSEARILEIIRGGTRTAWLKLSWMQ YLRWASNMEALWHGNPTLAEASLDTADRNWSEIVDRRKLLFQDRFNNGDHVRAWMNAVRESRIR >Mature_383_residues ASYLQFGHDSWNLLEEADIGAYTGLILSPVNDGPTDVQTRLARLGTLRDRLEVILDPQMYNPAVEKGKMDQWSYFPADFA TADHADIGWWTTRTRAIVDEGARLGVDAVCSPALFPRAFTDDYYSLMVEVADATKQYADQHEIQTMLTAVVSLRDLANPT RAMAIASILSRSSCERVYLTFVNEDVPPREPLKDGAGIPTAVHLVRLLSAEMRVHVAFVSHDLILWKLAGATDISTGKFM NLRRFSPGRWQDEEAGGRQVAYWNEGPLLARLREADVALLLRHGWFEGRDMSGNPSEARILEIIRGGTRTAWLKLSWMQY LRWASNMEALWHGNPTLAEASLDTADRNWSEIVDRRKLLFQDRFNNGDHVRAWMNAVRESRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43492; Mature: 43361
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYLQFGHDSWNLLEEADIGAYTGLILSPVNDGPTDVQTRLARLGTLRDRLEVILDPQM CCCCHHCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCC YNPAVEKGKMDQWSYFPADFATADHADIGWWTTRTRAIVDEGARLGVDAVCSPALFPRAF CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHCCCHH TDDYYSLMVEVADATKQYADQHEIQTMLTAVVSLRDLANPTRAMAIASILSRSSCERVYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE TFVNEDVPPREPLKDGAGIPTAVHLVRLLSAEMRVHVAFVSHDLILWKLAGATDISTGKF EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCEEEEEECCCCCCCCCCC MNLRRFSPGRWQDEEAGGRQVAYWNEGPLLARLREADVALLLRHGWFEGRDMSGNPSEAR EEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ILEIIRGGTRTAWLKLSWMQYLRWASNMEALWHGNPTLAEASLDTADRNWSEIVDRRKLL HHHHHHCCCCEEEEEHHHHHHHHHHCCCCEEECCCCCHHHCCCCCCCCCHHHHHHHHHHH FQDRFNNGDHVRAWMNAVRESRIR HHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ASYLQFGHDSWNLLEEADIGAYTGLILSPVNDGPTDVQTRLARLGTLRDRLEVILDPQM CCCHHCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCC YNPAVEKGKMDQWSYFPADFATADHADIGWWTTRTRAIVDEGARLGVDAVCSPALFPRAF CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHCCCHH TDDYYSLMVEVADATKQYADQHEIQTMLTAVVSLRDLANPTRAMAIASILSRSSCERVYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE TFVNEDVPPREPLKDGAGIPTAVHLVRLLSAEMRVHVAFVSHDLILWKLAGATDISTGKF EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCEEEEEECCCCCCCCCCC MNLRRFSPGRWQDEEAGGRQVAYWNEGPLLARLREADVALLLRHGWFEGRDMSGNPSEAR EEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ILEIIRGGTRTAWLKLSWMQYLRWASNMEALWHGNPTLAEASLDTADRNWSEIVDRRKLL HHHHHHCCCCEEEEEHHHHHHHHHHCCCCEEECCCCCHHHCCCCCCCCCHHHHHHHHHHH FQDRFNNGDHVRAWMNAVRESRIR HHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA