| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is parA [H]
Identifier: 21242651
GI number: 21242651
Start: 2230483
End: 2231265
Strand: Reverse
Name: parA [H]
Synonym: XAC1907
Alternate gene names: 21242651
Gene position: 2231265-2230483 (Counterclockwise)
Preceding gene: 21242652
Following gene: 77748621
Centisome position: 43.11
GC content: 69.22
Gene sequence:
>783_bases ATGCGTATCTGGGCAATCGCCAACCAAAAGGGCGGCGTCGGCAAGACCACCACGACGCTGGCATTGGGTCGCGGCCTGGC CGCGCTCGGCCACCGGGTCTTGTTGATCGACCTCGATCCGCACTCCTCGCTCACCCGCGCCTTCGGCGTGGCGATCGACC CGCCGCCGCGCGGGGTGCTGGACCTGTTCGGCACCCCGCCGAGCGACCTGGCCAGCCTGGCGCATGAAAGCAGCATCCCA GGCCTGTCGTACGTATGCGCGCAAGCCGCATTGGCCACGCTGGAACGCCGCAGCGCCAACCAGCCCGGCCTGGGCCTGGC GCTGCAGAACGCCATGACCCGGCATGCCGGCCAGCACGATTACATCCTGCTGGATTGCCCGCCGACCCTGGGCCTGCTGA TGATCAACGCTCTGGCCGCCTGCGACCGTGTCGTGGTGCCGACCCAGGCCGAGCCGCTTGCCCTGCATGGCCTGGCCAGC ATGGTGCGCACTGCCGACATGGTGCAGCGTTCGCGTCGCCGCGAGCTGCCGGTGTCGATCCTACCCACGCTGTTCGACCG CCGCACCCGCGCCGGCACCGAAACGCTGAAGGAAATGCAGGCCACCTACGGCCCGGTCGTCTGGGAAGACGCGGTGCCGG TGGATACCCGAATCTGCAACGCCGCCGCCCTGACCGTGCCTGCCGTTGGCGGCGACTATCAGGGCCGCGGTCTGTCCGCG TATCGCCGCGCGCTGGAATGGGTGCTGGCCGATGACGCGATGCGTATGGAGCAAGCCGCATGA
Upstream 100 bases:
>100_bases GGGGCGCCCAAGCTTCCCAAGTCTGACGGCGGCCAAACGGCCGTCACCACCGAAAGCGGCACAAGTTCCGTCCCCGCCGT AATTCAAGGAGTGCAGTGAC
Downstream 100 bases:
>100_bases GCAACTCCACCGCCAACGGTGAATTGGACGATTATCTGGAAGGCCTGCTGCACGATGCGGGCGTGGAGATCGTCGCCCCG CCCGCGGCCACCGCAGCGAC
Product: chromosome partioning protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVLDLFGTPPSDLASLAHESSIP GLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHDYILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLAS MVRTADMVQRSRRRELPVSILPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYQGRGLSA YRRALEWVLADDAMRMEQAA
Sequences:
>Translated_260_residues MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVLDLFGTPPSDLASLAHESSIP GLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHDYILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLAS MVRTADMVQRSRRRELPVSILPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYQGRGLSA YRRALEWVLADDAMRMEQAA >Mature_260_residues MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVLDLFGTPPSDLASLAHESSIP GLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHDYILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLAS MVRTADMVQRSRRRELPVSILPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYQGRGLSA YRRALEWVLADDAMRMEQAA
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27787; Mature: 27787
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVL CEEEEEECCCCCCCCHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHCCEECCCCCCHH DLFGTPPSDLASLAHESSIPGLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHD HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC YILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLASMVRTADMVQRSRRRELPVSI EEEEECCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH LPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYQGRGLSA HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCHHHEEECCCCCCCCCCCHHH YRRALEWVLADDAMRMEQAA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAIDPPPRGVL CEEEEEECCCCCCCCHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHCCEECCCCCCHH DLFGTPPSDLASLAHESSIPGLSYVCAQAALATLERRSANQPGLGLALQNAMTRHAGQHD HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC YILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLASMVRTADMVQRSRRRELPVSI EEEEECCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH LPTLFDRRTRAGTETLKEMQATYGPVVWEDAVPVDTRICNAAALTVPAVGGDYQGRGLSA HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCHHHEEECCCCCCCCCCCHHH YRRALEWVLADDAMRMEQAA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]