| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242649
Identifier: 21242649
GI number: 21242649
Start: 2228801
End: 2229109
Strand: Reverse
Name: 21242649
Synonym: XAC1905
Alternate gene names: NA
Gene position: 2229109-2228801 (Counterclockwise)
Preceding gene: 77748621
Following gene: 21242648
Centisome position: 43.07
GC content: 61.81
Gene sequence:
>309_bases ATGAGCACAGTGACATTGGGTGAGGATCTCGGCATCGAGACCAGCGCCGACCTCAAGCAAAAGCTTGCCGGATTCCTCAC CCAGGACGGCGACCTGGTGCTTGACGCCGGTGAAGTCCGGCGCATCCACACCGCCAGCGTGCAGTTGCTCTGCGCCTTTG TGCAAAGCCGCCGCCAGGCCGGCCTGCACACCGAATTCGATGGCTGCAACGACACTTTTAGGGATGCAGCGCGTCTGCTC GGCGTCACCGACGCGCTCGGACTCCCGGCATCCAATGACAACCTGAAATCTGTGGAGAACGCCGCATGA
Upstream 100 bases:
>100_bases CGCGCCTAGCTTGCCCGCACCTGCACGCACGACGATTCACCGTTAAAGCTTTTCCGCCCCCCGCCGTTAGTACGCATAGA ACCATCCGTTCGGAGCAACA
Downstream 100 bases:
>100_bases GCGCACGTATCTTGGTGGTGGACGATTCGGCGTCGATGCGCCAGATGGTCTCTTTCGCCCTCACCTCTGCCGGCTTTGCC GTCGAAGAAGCCGAAGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSTVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQAGLHTEFDGCNDTFRDAARLL GVTDALGLPASNDNLKSVENAA
Sequences:
>Translated_102_residues MSTVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQAGLHTEFDGCNDTFRDAARLL GVTDALGLPASNDNLKSVENAA >Mature_101_residues STVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQAGLHTEFDGCNDTFRDAARLLG VTDALGLPASNDNLKSVENAA
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10846; Mature: 10715
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQA CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC GLHTEFDGCNDTFRDAARLLGVTDALGLPASNDNLKSVENAA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC >Mature Secondary Structure STVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC GLHTEFDGCNDTFRDAARLLGVTDALGLPASNDNLKSVENAA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA