| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242613
Identifier: 21242613
GI number: 21242613
Start: 2170692
End: 2171309
Strand: Direct
Name: 21242613
Synonym: XAC1869
Alternate gene names: NA
Gene position: 2170692-2171309 (Clockwise)
Preceding gene: 21242612
Following gene: 21242614
Centisome position: 41.94
GC content: 53.88
Gene sequence:
>618_bases ATGACTCTTGATGAGCATCACGCGCAGCTTAAGGCTGAGGGTAAATGGGACGATTATCTTGCAATGAGGGCGGCCAAGGA GGAGGCTCGTCAGAAGGCGGTAGAGAAATATGCAGAACAATGTGCTCCTGTGGTTGCTGCATTGAGGCAGGCTGGCGTTG ATGTAAATTCAATCGGCGAGCTCGGCAAGGATGGCAAGTCTTATCCGGAGGCCGTCCCTGTGCTACTTGAACACTTGGGA TATTCTTATTCGGATGATGTGCGAGAAGGAATACTCCGAGAATTGGCAACGCCCCATGCACGCAAGTACTGGGATCAGCT CGTTGAAATCTTCGAGAAGAACACCCTCAGCCTTGCGCCGGAAATCCGTTATGTGGCAGCGCTTGCCTTGAGTGGCGCAG CGGACGATACGGTGCTGGACGATGTGATCCGGTTGTTGGGCGACAAGAGTCTCGGGCTGGATCGCGCTCCGCTGTTGATC GCCTTGATCCGCTCCAAATCGCCGAAGGCGAAGATGAAACTGCTGGAGCTACGGGATGATCCTGATCTTGGCAAGCAGAT CAAGATCTTTCGTCGGCTGGAAAGACATCAAAAAGCGAGCGGCACACTCTCCCTGTGA
Upstream 100 bases:
>100_bases TGAGGCCCGGCGCAAAACTTTCAGGGCCGCTTCGTCAAGCGGAAGCGGCAGGCGATATTGTGATAAAGGATATTCCGTGA AAAAAGATAAATCCGGCTGG
Downstream 100 bases:
>100_bases GGAGAGCCAAAGGATCTCATCATCGTAATCGCCAGAGCAACCGTTCGCCCTGCTTCGGCGGCGCCGGCACAGCTACGACG GACAGGACAACCTGCGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTLDEHHAQLKAEGKWDDYLAMRAAKEEARQKAVEKYAEQCAPVVAALRQAGVDVNSIGELGKDGKSYPEAVPVLLEHLG YSYSDDVREGILRELATPHARKYWDQLVEIFEKNTLSLAPEIRYVAALALSGAADDTVLDDVIRLLGDKSLGLDRAPLLI ALIRSKSPKAKMKLLELRDDPDLGKQIKIFRRLERHQKASGTLSL
Sequences:
>Translated_205_residues MTLDEHHAQLKAEGKWDDYLAMRAAKEEARQKAVEKYAEQCAPVVAALRQAGVDVNSIGELGKDGKSYPEAVPVLLEHLG YSYSDDVREGILRELATPHARKYWDQLVEIFEKNTLSLAPEIRYVAALALSGAADDTVLDDVIRLLGDKSLGLDRAPLLI ALIRSKSPKAKMKLLELRDDPDLGKQIKIFRRLERHQKASGTLSL >Mature_204_residues TLDEHHAQLKAEGKWDDYLAMRAAKEEARQKAVEKYAEQCAPVVAALRQAGVDVNSIGELGKDGKSYPEAVPVLLEHLGY SYSDDVREGILRELATPHARKYWDQLVEIFEKNTLSLAPEIRYVAALALSGAADDTVLDDVIRLLGDKSLGLDRAPLLIA LIRSKSPKAKMKLLELRDDPDLGKQIKIFRRLERHQKASGTLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22827; Mature: 22696
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDEHHAQLKAEGKWDDYLAMRAAKEEARQKAVEKYAEQCAPVVAALRQAGVDVNSIGE CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LGKDGKSYPEAVPVLLEHLGYSYSDDVREGILRELATPHARKYWDQLVEIFEKNTLSLAP HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHH EIRYVAALALSGAADDTVLDDVIRLLGDKSLGLDRAPLLIALIRSKSPKAKMKLLELRDD HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC PDLGKQIKIFRRLERHQKASGTLSL CCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLDEHHAQLKAEGKWDDYLAMRAAKEEARQKAVEKYAEQCAPVVAALRQAGVDVNSIGE CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LGKDGKSYPEAVPVLLEHLGYSYSDDVREGILRELATPHARKYWDQLVEIFEKNTLSLAP HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHH EIRYVAALALSGAADDTVLDDVIRLLGDKSLGLDRAPLLIALIRSKSPKAKMKLLELRDD HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC PDLGKQIKIFRRLERHQKASGTLSL CCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA