| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yflK [H]
Identifier: 21242603
GI number: 21242603
Start: 2153937
End: 2154650
Strand: Direct
Name: yflK [H]
Synonym: XAC1859
Alternate gene names: 21242603
Gene position: 2153937-2154650 (Clockwise)
Preceding gene: 21242602
Following gene: 21242604
Centisome position: 41.62
GC content: 67.09
Gene sequence:
>714_bases GTGGCGACGGCGGAGCAGGGTGCGCCGATCGCGATCAGGATCGATCATGTTGCCATCGGCAGCGCGCGCGACTTCACTCG CCCTGGCAGCCGCAGCGCGATCGACAAGCGCGCGCTGCAGGGAGTGGTGCAGGTGGGCCTCGAAGGCCTGGAGGGCGACG AACAAGGCGACCGGCGCGTGCATGGCGGGCCGGACAAGGCCATCCATCATTACCCGCGCGATCACTACGCTGCCTGGCGC GATGAACTTGGTCCGCACGTATTGCTTGAGGCTGCAGGTGCGTTTGGCGAAAACCTCAGCAGTGTGGGCGTGACCGAAGC CGATGTCTGTCTCGGCGATCGCTTCACCTTGGGCACGGCGGTGGTGGAGGTGTCGCAGTTGCGACAACCGTGCTGGAAGC TGTCGGACCGTTTTGGTGTGCGCCAGCTGGCGCGGCGGGTGCAGGAGACCGGCCGTACCGGCTGGTATTACCGCGTGCTG CAGCCGGGCAGCGTCGCGGCCGGCGACCTGCTGACCCTGCAGGCGCGGCCGCATCCGGATTGGCCGCTGTCGCGTCTTCA GCAGGTGCTGTACGCGCGCCAGGTCGATGTTGCAGTTGTCACCGCGGCATTGCAGCTGCCGCTCGTGCCGTCCTGGCGCG CGCTTTTCGAACGCCGCCTGCAGCGCAGCGAAGTGGAAAGCTGGAGCAAGCGGCTGGATGGTATTGGCGACTGA
Upstream 100 bases:
>100_bases TCGTCACCGTGCCCGGCGAGAAGATCGATGCCGGCATCCAGGTGCTGGGGGAGCTGTTGCGCGAGGCGCTGGCCGAGTCG CCAGGGTTGGGCGGGTGACG
Downstream 100 bases:
>100_bases GGAGGGATAACAAGACTACTGCGTAGTGTCAGGCGGATGTGGTCGCTGCGTACGTCGGCCAGTACAGCACGTGCACGCGC TTGCGCCGCGCAGTCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MATAEQGAPIAIRIDHVAIGSARDFTRPGSRSAIDKRALQGVVQVGLEGLEGDEQGDRRVHGGPDKAIHHYPRDHYAAWR DELGPHVLLEAAGAFGENLSSVGVTEADVCLGDRFTLGTAVVEVSQLRQPCWKLSDRFGVRQLARRVQETGRTGWYYRVL QPGSVAAGDLLTLQARPHPDWPLSRLQQVLYARQVDVAVVTAALQLPLVPSWRALFERRLQRSEVESWSKRLDGIGD
Sequences:
>Translated_237_residues MATAEQGAPIAIRIDHVAIGSARDFTRPGSRSAIDKRALQGVVQVGLEGLEGDEQGDRRVHGGPDKAIHHYPRDHYAAWR DELGPHVLLEAAGAFGENLSSVGVTEADVCLGDRFTLGTAVVEVSQLRQPCWKLSDRFGVRQLARRVQETGRTGWYYRVL QPGSVAAGDLLTLQARPHPDWPLSRLQQVLYARQVDVAVVTAALQLPLVPSWRALFERRLQRSEVESWSKRLDGIGD >Mature_236_residues ATAEQGAPIAIRIDHVAIGSARDFTRPGSRSAIDKRALQGVVQVGLEGLEGDEQGDRRVHGGPDKAIHHYPRDHYAAWRD ELGPHVLLEAAGAFGENLSSVGVTEADVCLGDRFTLGTAVVEVSQLRQPCWKLSDRFGVRQLARRVQETGRTGWYYRVLQ PGSVAAGDLLTLQARPHPDWPLSRLQQVLYARQVDVAVVTAALQLPLVPSWRALFERRLQRSEVESWSKRLDGIGD
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MOSC domain [H]
Homologues:
Organism=Escherichia coli, GI87082350, Length=207, Percent_Identity=39.6135265700483, Blast_Score=144, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005163 - InterPro: IPR005302 - InterPro: IPR015808 - InterPro: IPR011037 [H]
Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]
EC number: NA
Molecular weight: Translated: 26156; Mature: 26025
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAEQGAPIAIRIDHVAIGSARDFTRPGSRSAIDKRALQGVVQVGLEGLEGDEQGDRRV CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HGGPDKAIHHYPRDHYAAWRDELGPHVLLEAAGAFGENLSSVGVTEADVCLGDRFTLGTA CCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHCCCCHHHHHH VVEVSQLRQPCWKLSDRFGVRQLARRVQETGRTGWYYRVLQPGSVAAGDLLTLQARPHPD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCC WPLSRLQQVLYARQVDVAVVTAALQLPLVPSWRALFERRLQRSEVESWSKRLDGIGD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ATAEQGAPIAIRIDHVAIGSARDFTRPGSRSAIDKRALQGVVQVGLEGLEGDEQGDRRV CCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HGGPDKAIHHYPRDHYAAWRDELGPHVLLEAAGAFGENLSSVGVTEADVCLGDRFTLGTA CCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHCCCCHHHHHH VVEVSQLRQPCWKLSDRFGVRQLARRVQETGRTGWYYRVLQPGSVAAGDLLTLQARPHPD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCC WPLSRLQQVLYARQVDVAVVTAALQLPLVPSWRALFERRLQRSEVESWSKRLDGIGD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]