| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is avtA [H]
Identifier: 21242602
GI number: 21242602
Start: 2152651
End: 2153934
Strand: Direct
Name: avtA [H]
Synonym: XAC1858
Alternate gene names: 21242602
Gene position: 2152651-2153934 (Clockwise)
Preceding gene: 21242601
Following gene: 21242603
Centisome position: 41.59
GC content: 66.28
Gene sequence:
>1284_bases GTGCCGGGCGAGGCAAGCGGTCAGCGATCCGTCGCTGCACTGCACAGCGCCGCAGCCACTTGCGTTCGCTATGCTTGCGC CATGACAACTTCCTTCCAGATCTCCCGACGTGCGCAGGCGCTGACCAGTTCGGCGATTCGCGAAATCCTCAAGGTGACCG AACGGCCGGAGGTCATTTCCTTCGCCGGCGGCCTGCCGTCGCCGGCCACCTTTCCCGTGGAGCGCATGCGCGCAGCCAGC GACCAGGTGCTGCGCGACGCCCCGCAGGCGGCACTGCAATACGGCCCAACCGAAGGTTATGCGCCGCTGCGCGAATGGGT GGCCGCGCGGCTGAGTCGCGATGGCGCCAGCATCCGGCCCAGCCAGGTGCTGATCACCACCGGCTCGCAACAAGGCCTGG ACCTGCTCGGCAAGGTCTTCATCGACGAAGGCAGCAAGGTGTTGGTGGAAACGCCGAGCTACCTGGGCGCATTGCAGGCG TTTTCGTTGTTCCAGCCGGCATTCGTCGGCATGCCTTCGGACGAGGGCGGCGTGGTGGTGGATGCGCTGGATCCGTCGCT GCTGGCCGATGCGCGCTTTCTGTATTGCCTGCCGAATTTCCAGAATCCCACTGGCCGGCGCTTGCCGTTGGCGCGTCGCC AGGCCTTGGTGGCACGCGCGGCCGAGGCAGGCGTGCCGATCGTCGAAGACGACCCGTATGGCGAGCTGTACTACAGCGGG CAACCGTTGCCGAGTCTGTTGTCGATGAACCCGGAAGGCGTCATCTACATGGGCTCCTTTTCCAAGGTGCTCGCGCCCGG CCTGCGGCTGGGCTATGTGGTGGCGCCCGAAACGGTGCTGGGAAAACTGATCCAGGCCAAGCAGGCGGCCGATCTGCACA CTCCATCGTTCACGCAGCGCGTGGTGTACCAGACGCTGCAGGACGATTTTCTCCAGACCCATATTCCGCAGATCCGTGCG CTGTATGCGCGTCAGTGCAGCCTGATGCTGGAGGCGCTGGACCGGCACTTCCCGCCGCAGGTGCAGTGGAATCGCCCGGA GGGCGGCATGTTCTTGTGGGTGACCTTGCCGCCGGGTCTGGACGGGACCGCGTTGCTGGCGCGGGCCATCGCGCGCAATG TCGCGTTCGTTCCCGGCGCGCCGTTCTTCGCCACCTTGCCGCAGACCAATACGCTGCGCCTGTCGTTCGTCACCGTGCCC GGCGAGAAGATCGATGCCGGCATCCAGGTGCTGGGGGAGCTGTTGCGCGAGGCGCTGGCCGAGTCGCCAGGGTTGGGCGG GTGA
Upstream 100 bases:
>100_bases TCGCTGGTTGCGGCTTGTGTCGTGCGGCCAGGGCAGCTGCAGTGCACCCTGCACGGTTGCCTGGTGATGGCCGGCGACGT GCTGCCGGCCTTTGGACTCC
Downstream 100 bases:
>100_bases CGGTGGCGACGGCGGAGCAGGGTGCGCCGATCGCGATCAGGATCGATCATGTTGCCATCGGCAGCGCGCGCGACTTCACT CGCCCTGGCAGCCGCAGCGC
Product: valine-pyruvate aminotransferase
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MPGEASGQRSVAALHSAAATCVRYACAMTTSFQISRRAQALTSSAIREILKVTERPEVISFAGGLPSPATFPVERMRAAS DQVLRDAPQAALQYGPTEGYAPLREWVAARLSRDGASIRPSQVLITTGSQQGLDLLGKVFIDEGSKVLVETPSYLGALQA FSLFQPAFVGMPSDEGGVVVDALDPSLLADARFLYCLPNFQNPTGRRLPLARRQALVARAAEAGVPIVEDDPYGELYYSG QPLPSLLSMNPEGVIYMGSFSKVLAPGLRLGYVVAPETVLGKLIQAKQAADLHTPSFTQRVVYQTLQDDFLQTHIPQIRA LYARQCSLMLEALDRHFPPQVQWNRPEGGMFLWVTLPPGLDGTALLARAIARNVAFVPGAPFFATLPQTNTLRLSFVTVP GEKIDAGIQVLGELLREALAESPGLGG
Sequences:
>Translated_427_residues MPGEASGQRSVAALHSAAATCVRYACAMTTSFQISRRAQALTSSAIREILKVTERPEVISFAGGLPSPATFPVERMRAAS DQVLRDAPQAALQYGPTEGYAPLREWVAARLSRDGASIRPSQVLITTGSQQGLDLLGKVFIDEGSKVLVETPSYLGALQA FSLFQPAFVGMPSDEGGVVVDALDPSLLADARFLYCLPNFQNPTGRRLPLARRQALVARAAEAGVPIVEDDPYGELYYSG QPLPSLLSMNPEGVIYMGSFSKVLAPGLRLGYVVAPETVLGKLIQAKQAADLHTPSFTQRVVYQTLQDDFLQTHIPQIRA LYARQCSLMLEALDRHFPPQVQWNRPEGGMFLWVTLPPGLDGTALLARAIARNVAFVPGAPFFATLPQTNTLRLSFVTVP GEKIDAGIQVLGELLREALAESPGLGG >Mature_426_residues PGEASGQRSVAALHSAAATCVRYACAMTTSFQISRRAQALTSSAIREILKVTERPEVISFAGGLPSPATFPVERMRAASD QVLRDAPQAALQYGPTEGYAPLREWVAARLSRDGASIRPSQVLITTGSQQGLDLLGKVFIDEGSKVLVETPSYLGALQAF SLFQPAFVGMPSDEGGVVVDALDPSLLADARFLYCLPNFQNPTGRRLPLARRQALVARAAEAGVPIVEDDPYGELYYSGQ PLPSLLSMNPEGVIYMGSFSKVLAPGLRLGYVVAPETVLGKLIQAKQAADLHTPSFTQRVVYQTLQDDFLQTHIPQIRAL YARQCSLMLEALDRHFPPQVQWNRPEGGMFLWVTLPPGLDGTALLARAIARNVAFVPGAPFFATLPQTNTLRLSFVTVPG EKIDAGIQVLGELLREALAESPGLGG
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=419, Percent_Identity=31.0262529832936, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI33469970, Length=419, Percent_Identity=31.0262529832936, Blast_Score=187, Evalue=1e-47, Organism=Escherichia coli, GI1787710, Length=389, Percent_Identity=28.5347043701799, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1790797, Length=344, Percent_Identity=30.2325581395349, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI48994949, Length=401, Percent_Identity=27.1820448877805, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788722, Length=316, Percent_Identity=24.6835443037975, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321000, Length=249, Percent_Identity=28.5140562248996, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356535, Length=397, Percent_Identity=26.1964735516373, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 45927; Mature: 45796
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGEASGQRSVAALHSAAATCVRYACAMTTSFQISRRAQALTSSAIREILKVTERPEVIS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FAGGLPSPATFPVERMRAASDQVLRDAPQAALQYGPTEGYAPLREWVAARLSRDGASIRP ECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC SQVLITTGSQQGLDLLGKVFIDEGSKVLVETPSYLGALQAFSLFQPAFVGMPSDEGGVVV CEEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCHHHCCCCCCCCCEEE DALDPSLLADARFLYCLPNFQNPTGRRLPLARRQALVARAAEAGVPIVEDDPYGELYYSG ECCCCHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEECC QPLPSLLSMNPEGVIYMGSFSKVLAPGLRLGYVVAPETVLGKLIQAKQAADLHTPSFTQR CCCHHHHCCCCCCEEEECCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHH VVYQTLQDDFLQTHIPQIRALYARQCSLMLEALDRHFPPQVQWNRPEGGMFLWVTLPPGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCC DGTALLARAIARNVAFVPGAPFFATLPQTNTLRLSFVTVPGEKIDAGIQVLGELLREALA CHHHHHHHHHHHCCEECCCCCCEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH ESPGLGG CCCCCCC >Mature Secondary Structure PGEASGQRSVAALHSAAATCVRYACAMTTSFQISRRAQALTSSAIREILKVTERPEVIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FAGGLPSPATFPVERMRAASDQVLRDAPQAALQYGPTEGYAPLREWVAARLSRDGASIRP ECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC SQVLITTGSQQGLDLLGKVFIDEGSKVLVETPSYLGALQAFSLFQPAFVGMPSDEGGVVV CEEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCHHHCCCCCCCCCEEE DALDPSLLADARFLYCLPNFQNPTGRRLPLARRQALVARAAEAGVPIVEDDPYGELYYSG ECCCCHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEECC QPLPSLLSMNPEGVIYMGSFSKVLAPGLRLGYVVAPETVLGKLIQAKQAADLHTPSFTQR CCCHHHHCCCCCCEEEECCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHH VVYQTLQDDFLQTHIPQIRALYARQCSLMLEALDRHFPPQVQWNRPEGGMFLWVTLPPGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCC DGTALLARAIARNVAFVPGAPFFATLPQTNTLRLSFVTVPGEKIDAGIQVLGELLREALA CHHHHHHHHHHHCCEECCCCCCEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH ESPGLGG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA