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The map label for this gene is glcD [H]

Identifier: 21242589

GI number: 21242589

Start: 2141498

End: 2142916

Strand: Direct

Name: glcD [H]

Synonym: XAC1845

Alternate gene names: 21242589

Gene position: 2141498-2142916 (Clockwise)

Preceding gene: 21242587

Following gene: 21242590

Centisome position: 41.38

GC content: 64.55

Gene sequence:

>1419_bases
ATGACCGATCCCCGCATCCTTTCGTTGCAACAGGCCGTGCCTGCGTTGCGTTTGAAGACCGAGCCGGCCGACCTGGAGCA
TTACGGGCGCGACTGGACACGCCGCTGGACGCCGAACCCGCTCGCGATCGCCTTGCCCGGCTCGGTGGAGGAAGTGCAGG
CGGTCGTGCGTTGGGCGAACGCGCAAGCCGTGGCGGTGGTGCCGTCGGGCGGGCGCACCGGCTTGTCCGGCGGCGCAGTG
GCGGCCAACGGCGAGTTGGTGTTGAGCCTGGAGCGTTTGAACAAACCGCTGGATTTCAACGCAGTCGATCGCACGCTCAC
TGTGCAGGCCGGCATGCCGCTGGAAGCGGTGCACAACGCCGCGCGCGAGCAGGGGCTGGTGTACCCGGTGGATTTTGCGG
CACGCGGCTCGTGCTCGATCGGCGGCAATATCGCCACCAATGCCGGCGGCATCCGGGTGATCCGCTACGGCAATACGCGC
GAATGGGTGGCCGGGTTGAAGGTGGTCACCGGTAGCGGCGAGTTGCTGGAACTCAACAATGCGCTGGTGAAGAATTCCAG
CGGCTACGACTTCCGGCATCTGATGATCGGCTCCGAGGGCACGCTGGGCATCGTGGTCGAGGCCACGCTGCGGCTGACCG
ACCCGCCGCCGCCCAGCAATGTGATGCTGCTGGCATTGCCGTCCTTCGACGTATTGATGCAGGTGTTCGCCGCGTTTCGC
GCGCAGCTGCGCCTGGAGGCTTTCGAATTTTTTACCGATCGCGCGCTGGAGCATGTGCTTGCGCATGGCGCGCAGGCGCC
GTTCGCCGAGGTTCACCCGTATTACGTGGTCACCGAATTCGCGGCAGGCGACGAGGCGCAGGAAGCTGCCGCGATGGCGG
CCTTCGAGACCTGCATGGAGCAGGGCTGGGTCAGCGATGGCGTGATCAGCCAGAGCGATGCGCAGGCCGCCCAACTGTGG
CGCCTGCGCGAAGGCATCACCGAAGCGCTGGCGCGCTACACGCCGTACAAGAACGACGTGTCGGTGCGCATCTCGGCGAT
GCCGGCGTTCCTGGCCGAAACCCAGGCGTTGCTGCACGATGCGTATCCGGACTTCGATGTGGTGTGGTTCGGGCATATCG
GCGATGGCAACCTGCACATCAACGTGCTCAAACCCGATGCTACCAGCCAGGCCGATTTCGTTGCGGCCTGCGATCAGGTC
ACCAAGTTGCTGGCGCAGGCCCTGCAGCGTTTCGACGGCAGCATTTCCGCCGAACACGGCATCGGTCTGGTCAAGAAGGC
CTATCTATGGAGCACGCGCTCTGCCGAGGAAATCGCCTTGATGCGCGGCATCAAACATGTGCTCGATCCTCATCTTTTGC
TGAATCCCGGCAAGCTGTTCGAGACCCATGACGCACCTGCCAACACGCCCGCCGGTTAG

Upstream 100 bases:

>100_bases
TTCAGCTGAATCCAACGCGGCGTCGGCCGGGAGTGCGCCGGCTGGACGAGGCAGGCCGGCGCTGGCACGCTGTGCGGTTC
CTACCGCAGCGCCGCGTGCC

Downstream 100 bases:

>100_bases
TCTTCCAGCACCTTCACACGGAATCGATCAGCCCATGATGCGCTCCCTCGTGTTCTGCGCTTTGACGCTGCTGCCGCTGG
CAGCGTTCGCATCCAGCCTG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MTDPRILSLQQAVPALRLKTEPADLEHYGRDWTRRWTPNPLAIALPGSVEEVQAVVRWANAQAVAVVPSGGRTGLSGGAV
AANGELVLSLERLNKPLDFNAVDRTLTVQAGMPLEAVHNAAREQGLVYPVDFAARGSCSIGGNIATNAGGIRVIRYGNTR
EWVAGLKVVTGSGELLELNNALVKNSSGYDFRHLMIGSEGTLGIVVEATLRLTDPPPPSNVMLLALPSFDVLMQVFAAFR
AQLRLEAFEFFTDRALEHVLAHGAQAPFAEVHPYYVVTEFAAGDEAQEAAAMAAFETCMEQGWVSDGVISQSDAQAAQLW
RLREGITEALARYTPYKNDVSVRISAMPAFLAETQALLHDAYPDFDVVWFGHIGDGNLHINVLKPDATSQADFVAACDQV
TKLLAQALQRFDGSISAEHGIGLVKKAYLWSTRSAEEIALMRGIKHVLDPHLLLNPGKLFETHDAPANTPAG

Sequences:

>Translated_472_residues
MTDPRILSLQQAVPALRLKTEPADLEHYGRDWTRRWTPNPLAIALPGSVEEVQAVVRWANAQAVAVVPSGGRTGLSGGAV
AANGELVLSLERLNKPLDFNAVDRTLTVQAGMPLEAVHNAAREQGLVYPVDFAARGSCSIGGNIATNAGGIRVIRYGNTR
EWVAGLKVVTGSGELLELNNALVKNSSGYDFRHLMIGSEGTLGIVVEATLRLTDPPPPSNVMLLALPSFDVLMQVFAAFR
AQLRLEAFEFFTDRALEHVLAHGAQAPFAEVHPYYVVTEFAAGDEAQEAAAMAAFETCMEQGWVSDGVISQSDAQAAQLW
RLREGITEALARYTPYKNDVSVRISAMPAFLAETQALLHDAYPDFDVVWFGHIGDGNLHINVLKPDATSQADFVAACDQV
TKLLAQALQRFDGSISAEHGIGLVKKAYLWSTRSAEEIALMRGIKHVLDPHLLLNPGKLFETHDAPANTPAG
>Mature_471_residues
TDPRILSLQQAVPALRLKTEPADLEHYGRDWTRRWTPNPLAIALPGSVEEVQAVVRWANAQAVAVVPSGGRTGLSGGAVA
ANGELVLSLERLNKPLDFNAVDRTLTVQAGMPLEAVHNAAREQGLVYPVDFAARGSCSIGGNIATNAGGIRVIRYGNTRE
WVAGLKVVTGSGELLELNNALVKNSSGYDFRHLMIGSEGTLGIVVEATLRLTDPPPPSNVMLLALPSFDVLMQVFAAFRA
QLRLEAFEFFTDRALEHVLAHGAQAPFAEVHPYYVVTEFAAGDEAQEAAAMAAFETCMEQGWVSDGVISQSDAQAAQLWR
LREGITEALARYTPYKNDVSVRISAMPAFLAETQALLHDAYPDFDVVWFGHIGDGNLHINVLKPDATSQADFVAACDQVT
KLLAQALQRFDGSISAEHGIGLVKKAYLWSTRSAEEIALMRGIKHVLDPHLLLNPGKLFETHDAPANTPAG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=446, Percent_Identity=36.322869955157, Blast_Score=263, Evalue=2e-70,
Organism=Homo sapiens, GI37595756, Length=468, Percent_Identity=30.1282051282051, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI37595754, Length=491, Percent_Identity=28.7169042769857, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI4501993, Length=270, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1789351, Length=463, Percent_Identity=30.8855291576674, Blast_Score=178, Evalue=6e-46,
Organism=Escherichia coli, GI1787977, Length=505, Percent_Identity=23.7623762376238, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI48994907, Length=491, Percent_Identity=21.1812627291242, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI48994914, Length=162, Percent_Identity=28.3950617283951, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=450, Percent_Identity=32.8888888888889, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71992373, Length=462, Percent_Identity=29.004329004329, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71992381, Length=462, Percent_Identity=27.9220779220779, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71992392, Length=368, Percent_Identity=29.6195652173913, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17556096, Length=201, Percent_Identity=24.3781094527363, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320023, Length=476, Percent_Identity=36.5546218487395, Blast_Score=301, Evalue=1e-82,
Organism=Saccharomyces cerevisiae, GI6320764, Length=450, Percent_Identity=32.2222222222222, Blast_Score=260, Evalue=4e-70,
Organism=Saccharomyces cerevisiae, GI6320027, Length=449, Percent_Identity=26.0579064587973, Blast_Score=150, Evalue=4e-37,
Organism=Drosophila melanogaster, GI18921117, Length=468, Percent_Identity=34.8290598290598, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24639277, Length=468, Percent_Identity=34.8290598290598, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24639275, Length=468, Percent_Identity=34.8290598290598, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24653753, Length=276, Percent_Identity=29.7101449275362, Blast_Score=98, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50960; Mature: 50829

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPRILSLQQAVPALRLKTEPADLEHYGRDWTRRWTPNPLAIALPGSVEEVQAVVRWAN
CCCCCEEEHHHHCCHHEEECCCCCHHHHCCCHHCCCCCCCEEEECCCCHHHHHHHHHHCC
AQAVAVVPSGGRTGLSGGAVAANGELVLSLERLNKPLDFNAVDRTLTVQAGMPLEAVHNA
CCEEEEEECCCCCCCCCCEEEECCCEEEEHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH
AREQGLVYPVDFAARGSCSIGGNIATNAGGIRVIRYGNTREWVAGLKVVTGSGELLELNN
HHHCCCEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHCCEEEEECCCCEEECCH
ALVKNSSGYDFRHLMIGSEGTLGIVVEATLRLTDPPPPSNVMLLALPSFDVLMQVFAAFR
HHEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHH
AQLRLEAFEFFTDRALEHVLAHGAQAPFAEVHPYYVVTEFAAGDEAQEAAAMAAFETCME
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
QGWVSDGVISQSDAQAAQLWRLREGITEALARYTPYKNDVSVRISAMPAFLAETQALLHD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH
AYPDFDVVWFGHIGDGNLHINVLKPDATSQADFVAACDQVTKLLAQALQRFDGSISAEHG
CCCCEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IGLVKKAYLWSTRSAEEIALMRGIKHVLDPHLLLNPGKLFETHDAPANTPAG
CCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
TDPRILSLQQAVPALRLKTEPADLEHYGRDWTRRWTPNPLAIALPGSVEEVQAVVRWAN
CCCCEEEHHHHCCHHEEECCCCCHHHHCCCHHCCCCCCCEEEECCCCHHHHHHHHHHCC
AQAVAVVPSGGRTGLSGGAVAANGELVLSLERLNKPLDFNAVDRTLTVQAGMPLEAVHNA
CCEEEEEECCCCCCCCCCEEEECCCEEEEHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH
AREQGLVYPVDFAARGSCSIGGNIATNAGGIRVIRYGNTREWVAGLKVVTGSGELLELNN
HHHCCCEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHCCEEEEECCCCEEECCH
ALVKNSSGYDFRHLMIGSEGTLGIVVEATLRLTDPPPPSNVMLLALPSFDVLMQVFAAFR
HHEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHH
AQLRLEAFEFFTDRALEHVLAHGAQAPFAEVHPYYVVTEFAAGDEAQEAAAMAAFETCME
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
QGWVSDGVISQSDAQAAQLWRLREGITEALARYTPYKNDVSVRISAMPAFLAETQALLHD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH
AYPDFDVVWFGHIGDGNLHINVLKPDATSQADFVAACDQVTKLLAQALQRFDGSISAEHG
CCCCEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IGLVKKAYLWSTRSAEEIALMRGIKHVLDPHLLLNPGKLFETHDAPANTPAG
CCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]