| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242587
Identifier: 21242587
GI number: 21242587
Start: 2139339
End: 2139884
Strand: Direct
Name: 21242587
Synonym: XAC1843
Alternate gene names: NA
Gene position: 2139339-2139884 (Clockwise)
Preceding gene: 77748614
Following gene: 21242589
Centisome position: 41.34
GC content: 66.3
Gene sequence:
>546_bases GTGGATGCAACCCTGCAGCAGCAATTGGCGGTCTACCGCCTGCGTTGGCCGGAGGAAGCCGCGCTGACCGAGCAGTTCGC GCAACTGCTGGACGATGCCACCGATCCGTTCGTGCGCGAGCGTGTCGAAGGTCATTTCACCGGCTCGGCGTGGGTGGTGA GCGCCGACGGCACACGCACCTTGCTGACCCATCACCGCAAGCTGCAGCGCTGGCTGCAACTGGGTGGACATGCCGACGGC GACCGCGATCTGGCCCAGGTGGCATTACGCGAAGCGGAGGAGGAATCCGGGCTCGGTGGCCTGCGGCTCGCCGATGGGCA GCTGTTCGATCTGGACCGTCACTGGATTCCGGCGCGCGGCGACGTGGCGGGGCATTGGCACTTTGATGCGCGATACGTGG TGGTGGCCGGTGCGGACGAGGCATTCGAGGTCAGCGAAGAATCGCTGGCACTGGCATGGCGCCCGATTGCCGAGCTGCTT GCCGAGCCCGAGCTCGATCCGTCGCTGCGTCGGATGGCGGAGAAGTGGCTGGAAAGCAGGGATTAG
Upstream 100 bases:
>100_bases CCTACCTTGCCAAAGCTACACGCTCACGACAAGCGCGTACGCAGCATGAATGGCGATAATGCCCGCCTGGCCCGCACCGG GCGACCGAGAAAGAGCGATG
Downstream 100 bases:
>100_bases CGATTCGGGATTCGGGATTGGCAGAAGCGGTGGTCCGGCGCCGATCTACCTAGCCGGCCCCCATGTTCTACCTCCTACAG CGTGATTGGACCGGTGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Nudix Hydrolase; NUDIX Family Hydrolase; Nudix Family Hydrolase; ADP-Ribose Pyrophosphatase; (Di)Nucleoside Polyphosphate Hydrolase-Like Protein; Hydrolase Nudix Family Protein; Hydrolase NUDIX Family; NUDIX Family Protein; Nudix Domain Protein; Nudix Hydrolase Family Protein; NTP Pyrophosphohydrolase; (Di)Nucleoside Polyphosphate Hydrolase; Phosphohydrolase MutT/Nudix Family Protein; Nudix Superfamily Hydrolase; Hydrolase Nudix
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MDATLQQQLAVYRLRWPEEAALTEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRTLLTHHRKLQRWLQLGGHADG DRDLAQVALREAEEESGLGGLRLADGQLFDLDRHWIPARGDVAGHWHFDARYVVVAGADEAFEVSEESLALAWRPIAELL AEPELDPSLRRMAEKWLESRD
Sequences:
>Translated_181_residues MDATLQQQLAVYRLRWPEEAALTEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRTLLTHHRKLQRWLQLGGHADG DRDLAQVALREAEEESGLGGLRLADGQLFDLDRHWIPARGDVAGHWHFDARYVVVAGADEAFEVSEESLALAWRPIAELL AEPELDPSLRRMAEKWLESRD >Mature_181_residues MDATLQQQLAVYRLRWPEEAALTEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRTLLTHHRKLQRWLQLGGHADG DRDLAQVALREAEEESGLGGLRLADGQLFDLDRHWIPARGDVAGHWHFDARYVVVAGADEAFEVSEESLALAWRPIAELL AEPELDPSLRRMAEKWLESRD
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20477; Mature: 20477
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATLQQQLAVYRLRWPEEAALTEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRT CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCHH LLTHHRKLQRWLQLGGHADGDRDLAQVALREAEEESGLGGLRLADGQLFDLDRHWIPARG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCC DVAGHWHFDARYVVVAGADEAFEVSEESLALAWRPIAELLAEPELDPSLRRMAEKWLESR CCCEEEEECCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC D C >Mature Secondary Structure MDATLQQQLAVYRLRWPEEAALTEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRT CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCHH LLTHHRKLQRWLQLGGHADGDRDLAQVALREAEEESGLGGLRLADGQLFDLDRHWIPARG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCC DVAGHWHFDARYVVVAGADEAFEVSEESLALAWRPIAELLAEPELDPSLRRMAEKWLESR CCCEEEEECCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA