| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242551
Identifier: 21242551
GI number: 21242551
Start: 2079844
End: 2080617
Strand: Reverse
Name: 21242551
Synonym: XAC1806
Alternate gene names: NA
Gene position: 2080617-2079844 (Counterclockwise)
Preceding gene: 21242552
Following gene: 21242550
Centisome position: 40.2
GC content: 65.63
Gene sequence:
>774_bases TTGAGCATGGCCACGCCCTCCTCCGCCCAGCGCTTCAACGATCGCGTGGCGGCCTATGTGCGCTACCGGCCCAGTTACCC GCCGCAGTTGCTGCGCTGGCTGCACGGAGAACTCGGCGTGACGCCCGCAACGGCAGTGGCCGACATCGGCGCCGGCACCG GCATTTCCAGCCGCCTGTTTTTGGAAGCCGGATATGCGGTGACGGCGGTGGAGCCCAACCAGGCCATGCGCGAAGCGGCG CTGCAGTGGCTGGCGGAATTTCCCAAGTTTCAGGCGATCGACGGCACCGCCGAAGCCACCGGGCTGGCCGATGCCAGCGT GGGCTTGGTGTCTGCGGCACAAGCCTTCCACTGGTTCGACATGCAGGCCGTGCGCGACGAATGGGCGCGCATCCTGCAAC CCGGTGGGCTGGCGGTGGTGTACTGGAATTCGCGCGAACTGGACAGCACCGCGTTCCTGCGCGGCTACGAGCAGTTGCTG CTGGATTACGGCACCGACTATTCCGCAGTGGCCGAGCGGTATCAGGACGATGCCACCATGCAGGCGTGGTTCGGCGAGGG TTTCCGCGCAATGGCGCGCTTCCCGAATGTGCAGCGGCTGGATTTCGAGAGCTTGCGCGGCCGCCTGCTATCGTCCTCGT ACGCCCCGCTTGCGCACGACCCACGTCATGCCCCGATGCTCGCCGCGCTACGCACGTTGTTCGATGCGTATGCGCACGAT GGGCTGATCGACTTCCAATACCAAACCCGCGTGTTCGCCGGGAGATTGAACTGA
Upstream 100 bases:
>100_bases GCCTCATCATGGGCTGGCTGGCGGTGGCGCTCTGGGTCGTGGGAATCGCGTTTTTCCTGCTGTTCTTCGGCGGCATGGCC TGGCTTGCGGCCGCCAACAG
Downstream 100 bases:
>100_bases CCCGCATGTATTCGCTCGCCCGCCCCTTCCTGTTTTCCTTGGATGCCGAGCGCGCCCACGCGCTGGCGTTGCGCTCCATC GACACCGCCTACCGCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSMATPSSAQRFNDRVAAYVRYRPSYPPQLLRWLHGELGVTPATAVADIGAGTGISSRLFLEAGYAVTAVEPNQAMREAA LQWLAEFPKFQAIDGTAEATGLADASVGLVSAAQAFHWFDMQAVRDEWARILQPGGLAVVYWNSRELDSTAFLRGYEQLL LDYGTDYSAVAERYQDDATMQAWFGEGFRAMARFPNVQRLDFESLRGRLLSSSYAPLAHDPRHAPMLAALRTLFDAYAHD GLIDFQYQTRVFAGRLN
Sequences:
>Translated_257_residues MSMATPSSAQRFNDRVAAYVRYRPSYPPQLLRWLHGELGVTPATAVADIGAGTGISSRLFLEAGYAVTAVEPNQAMREAA LQWLAEFPKFQAIDGTAEATGLADASVGLVSAAQAFHWFDMQAVRDEWARILQPGGLAVVYWNSRELDSTAFLRGYEQLL LDYGTDYSAVAERYQDDATMQAWFGEGFRAMARFPNVQRLDFESLRGRLLSSSYAPLAHDPRHAPMLAALRTLFDAYAHD GLIDFQYQTRVFAGRLN >Mature_256_residues SMATPSSAQRFNDRVAAYVRYRPSYPPQLLRWLHGELGVTPATAVADIGAGTGISSRLFLEAGYAVTAVEPNQAMREAAL QWLAEFPKFQAIDGTAEATGLADASVGLVSAAQAFHWFDMQAVRDEWARILQPGGLAVVYWNSRELDSTAFLRGYEQLLL DYGTDYSAVAERYQDDATMQAWFGEGFRAMARFPNVQRLDFESLRGRLLSSSYAPLAHDPRHAPMLAALRTLFDAYAHDG LIDFQYQTRVFAGRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28556; Mature: 28425
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMATPSSAQRFNDRVAAYVRYRPSYPPQLLRWLHGELGVTPATAVADIGAGTGISSRLF CCCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEE LEAGYAVTAVEPNQAMREAALQWLAEFPKFQAIDGTAEATGLADASVGLVSAAQAFHWFD EECCCEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHH MQAVRDEWARILQPGGLAVVYWNSRELDSTAFLRGYEQLLLDYGTDYSAVAERYQDDATM HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH QAWFGEGFRAMARFPNVQRLDFESLRGRLLSSSYAPLAHDPRHAPMLAALRTLFDAYAHD HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GLIDFQYQTRVFAGRLN CEEEEEEHHHEECCCCC >Mature Secondary Structure SMATPSSAQRFNDRVAAYVRYRPSYPPQLLRWLHGELGVTPATAVADIGAGTGISSRLF CCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEE LEAGYAVTAVEPNQAMREAALQWLAEFPKFQAIDGTAEATGLADASVGLVSAAQAFHWFD EECCCEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHH MQAVRDEWARILQPGGLAVVYWNSRELDSTAFLRGYEQLLLDYGTDYSAVAERYQDDATM HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH QAWFGEGFRAMARFPNVQRLDFESLRGRLLSSSYAPLAHDPRHAPMLAALRTLFDAYAHD HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GLIDFQYQTRVFAGRLN CEEEEEEHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]