| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is sglT [H]
Identifier: 21242539
GI number: 21242539
Start: 2064992
End: 2066554
Strand: Direct
Name: sglT [H]
Synonym: XAC1794
Alternate gene names: 21242539
Gene position: 2064992-2066554 (Clockwise)
Preceding gene: 21242538
Following gene: 21242541
Centisome position: 39.9
GC content: 63.28
Gene sequence:
>1563_bases GTGGGTTTGGCGACGTTGGATATCGTGATCGTGCTGGTCTATCTGGCCGGCATCTTCGTGCTCGCGCAGTGGGTCTCGCG CGAGAAGGCAGGCCATAGCAAGAGCGCCGAGGATTATTTCCTGGCGAGCAAGTCGCTGCCGTGGTGGGCGATCGGCGCAT CGCTGATCGCTGCGAACATTTCGGCCGAACAGATCATTGGCATGGCCGGTTCGGGCTATGCGATCGGTCTGGCGATCGCC TCCTACGAATGGATGGCGGCGCTGACCCTGCTGATCGTCGGCAAGTTCTTCCTGCCGATCTTCCTGCGCAACGGCATCTA CACCATGCCGCAGTTTTTGGAGCAGCGTTACGGCACGTGGATCCGCACGCTGATGGCAGTGTTCTGGCTGCTGCTGTACG TGTTCGTCAACCTGACCTCGATCCTGTGGCTGGGATCGATCGCGGTCAGCCAGGTCACCGGCATGGACCAGACCCTGGCG CTGGCGTTGATCGGCGTGTTCGCGCTGGTCTACCAGCTGTACGGCGGGCTGAAGGCGGTGGCGCTGACCGACATCGTGCA GGTCACCCTGCTGGTGCTGGGCGGCCTGCTGGTGGCGGGGCTGACCCTGGCGCGCATTGGCGACGGTGCCGGCGTGCTGG CCGGCTTCCAGCACCTGTGGACTGCGCACCCCGATCACTTCCACATGATCCTGACCAGGGACAACCCGTTCTACAAGGAT CTGCCGGGCCTGAGCGTGCTGCTCGGCGGGCTGTGGGTGATGAACATCAGTTACTGGGGTTTCAATCAGTACATCATCCA GCGCGCGCTGGCCGCCAAGAACATCGGCGAGGCGCAAAAGGGCATGGTGTTCGCCGCGTTCCTGAAGCTGCTGATGCCGT TGGTGATCGTGGTGCCGGGCATTGCCGCAGTGGTGCTGGCGCCGGATCTGGCCAAGCCCGACCAGGCCTACCCGACCATG ATGCAGTTGTTGCCGACCGGCATCCTGGGCCTGGTGTTTGCCGCGTTGGTTGCGGCGATCGTGGCCTCGCTGGCCTCGAA GATCAATTCGGTGGCGACGATCTTCACCCTGGATTTCTACGCCAAGTTCCGTCCGCAGACCGAGCAGAAGCAGCTGGTGC GCGTGGGGCGTCTCGTGGCCGCCGCCTCGGTGCTGATCGGCATCCTCACTGCGCGGCCGTTGCTGGGCAACTTCGATCAG GGCTTTCAGTTCATCCAGGAATTCACCGGCTTCTTTACCCCAGGCGTGGTGGTGATCTTCATGCTTGGCCTGTTCTGGAA GCGGGCCAACGAAGCCGGCGCGCTGACCGCGGCGATCGGCTCGGTGGTGTTGTCGTTCGCGCTCAAGTTCGCCTGGCCCG AACTGCCGTTCATGGACCGCATCGGTGTGGTGTTCGTTGCCGCGCTGGTATTGGCGGTGGTGGTGTCGCTGCTGACGCCT GCCACGCAGGCACGCGATCTGATCCGTACCAACGACGTTGCCTACGGCACCACGCTCGGCTTCAAGATCGGCGCCGCCGG CGTGATCGCGATTCTGATCGTGCTGTACACCGTGTTCTGGTAA
Upstream 100 bases:
>100_bases GGTTCGCCGCGTTGCCGTGGCGCATGCTGTGCGTTGCGGCGGCATTCTGCAGGCCTGTCTGGCGTTCGACGCACACCCCA AAGCCAGACAGGAGAGTGCA
Downstream 100 bases:
>100_bases GCAGCGATGTCTTGAAACGCAGCGCGGCGTGGCACCTTGGTGTCGCGCCGCGCTGCGTTGACAGCCTGCCGTTTCGGAGG CGCCAGCCCTCGTCAAGCGG
Product: sodium/glucose cotransport protein
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MGLATLDIVIVLVYLAGIFVLAQWVSREKAGHSKSAEDYFLASKSLPWWAIGASLIAANISAEQIIGMAGSGYAIGLAIA SYEWMAALTLLIVGKFFLPIFLRNGIYTMPQFLEQRYGTWIRTLMAVFWLLLYVFVNLTSILWLGSIAVSQVTGMDQTLA LALIGVFALVYQLYGGLKAVALTDIVQVTLLVLGGLLVAGLTLARIGDGAGVLAGFQHLWTAHPDHFHMILTRDNPFYKD LPGLSVLLGGLWVMNISYWGFNQYIIQRALAAKNIGEAQKGMVFAAFLKLLMPLVIVVPGIAAVVLAPDLAKPDQAYPTM MQLLPTGILGLVFAALVAAIVASLASKINSVATIFTLDFYAKFRPQTEQKQLVRVGRLVAAASVLIGILTARPLLGNFDQ GFQFIQEFTGFFTPGVVVIFMLGLFWKRANEAGALTAAIGSVVLSFALKFAWPELPFMDRIGVVFVAALVLAVVVSLLTP ATQARDLIRTNDVAYGTTLGFKIGAAGVIAILIVLYTVFW
Sequences:
>Translated_520_residues MGLATLDIVIVLVYLAGIFVLAQWVSREKAGHSKSAEDYFLASKSLPWWAIGASLIAANISAEQIIGMAGSGYAIGLAIA SYEWMAALTLLIVGKFFLPIFLRNGIYTMPQFLEQRYGTWIRTLMAVFWLLLYVFVNLTSILWLGSIAVSQVTGMDQTLA LALIGVFALVYQLYGGLKAVALTDIVQVTLLVLGGLLVAGLTLARIGDGAGVLAGFQHLWTAHPDHFHMILTRDNPFYKD LPGLSVLLGGLWVMNISYWGFNQYIIQRALAAKNIGEAQKGMVFAAFLKLLMPLVIVVPGIAAVVLAPDLAKPDQAYPTM MQLLPTGILGLVFAALVAAIVASLASKINSVATIFTLDFYAKFRPQTEQKQLVRVGRLVAAASVLIGILTARPLLGNFDQ GFQFIQEFTGFFTPGVVVIFMLGLFWKRANEAGALTAAIGSVVLSFALKFAWPELPFMDRIGVVFVAALVLAVVVSLLTP ATQARDLIRTNDVAYGTTLGFKIGAAGVIAILIVLYTVFW >Mature_519_residues GLATLDIVIVLVYLAGIFVLAQWVSREKAGHSKSAEDYFLASKSLPWWAIGASLIAANISAEQIIGMAGSGYAIGLAIAS YEWMAALTLLIVGKFFLPIFLRNGIYTMPQFLEQRYGTWIRTLMAVFWLLLYVFVNLTSILWLGSIAVSQVTGMDQTLAL ALIGVFALVYQLYGGLKAVALTDIVQVTLLVLGGLLVAGLTLARIGDGAGVLAGFQHLWTAHPDHFHMILTRDNPFYKDL PGLSVLLGGLWVMNISYWGFNQYIIQRALAAKNIGEAQKGMVFAAFLKLLMPLVIVVPGIAAVVLAPDLAKPDQAYPTMM QLLPTGILGLVFAALVAAIVASLASKINSVATIFTLDFYAKFRPQTEQKQLVRVGRLVAAASVLIGILTARPLLGNFDQG FQFIQEFTGFFTPGVVVIFMLGLFWKRANEAGALTAAIGSVVLSFALKFAWPELPFMDRIGVVFVAALVLAVVVSLLTPA TQARDLIRTNDVAYGTTLGFKIGAAGVIAILIVLYTVFW
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG4146
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI17941285, Length=467, Percent_Identity=35.3319057815846, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI110835708, Length=555, Percent_Identity=34.0540540540541, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI4507031, Length=467, Percent_Identity=31.6916488222698, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI4507033, Length=473, Percent_Identity=31.0782241014799, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI14140236, Length=468, Percent_Identity=27.991452991453, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI206597483, Length=450, Percent_Identity=34.2222222222222, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI109659836, Length=584, Percent_Identity=33.5616438356164, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI109659839, Length=600, Percent_Identity=32.5, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI206597487, Length=475, Percent_Identity=32.4210526315789, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI4507035, Length=433, Percent_Identity=25.635103926097, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI157671931, Length=426, Percent_Identity=24.8826291079812, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI256985183, Length=429, Percent_Identity=25.4079254079254, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI167466278, Length=460, Percent_Identity=23.4782608695652, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI310128183, Length=499, Percent_Identity=22.8456913827655, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1790113, Length=478, Percent_Identity=31.3807531380753, Blast_Score=221, Evalue=9e-59, Organism=Escherichia coli, GI87082237, Length=447, Percent_Identity=25.503355704698, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1787251, Length=403, Percent_Identity=24.5657568238213, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32566512, Length=385, Percent_Identity=22.5974025974026, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24651739, Length=454, Percent_Identity=25.1101321585903, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI28573698, Length=475, Percent_Identity=24.6315789473684, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24651741, Length=429, Percent_Identity=23.3100233100233, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI161076631, Length=350, Percent_Identity=27.1428571428571, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI281362918, Length=435, Percent_Identity=23.2183908045977, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24645928, Length=356, Percent_Identity=26.4044943820225, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI221459584, Length=414, Percent_Identity=23.6714975845411, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24640370, Length=359, Percent_Identity=28.4122562674095, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24650192, Length=369, Percent_Identity=25.4742547425474, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI221459586, Length=513, Percent_Identity=23.7816764132554, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24648033, Length=403, Percent_Identity=25.3101736972705, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI21356865, Length=403, Percent_Identity=25.3101736972705, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI221459588, Length=389, Percent_Identity=23.9074550128535, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24641117, Length=476, Percent_Identity=23.109243697479, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI19920916, Length=372, Percent_Identity=26.0752688172043, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI281362054, Length=379, Percent_Identity=23.4828496042216, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362052, Length=379, Percent_Identity=23.4828496042216, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362050, Length=379, Percent_Identity=23.4828496042216, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648056, Length=379, Percent_Identity=23.4828496042216, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI21356827, Length=379, Percent_Identity=23.4828496042216, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574994, Length=430, Percent_Identity=24.1860465116279, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281364280, Length=343, Percent_Identity=24.7813411078717, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 56174; Mature: 56043
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLATLDIVIVLVYLAGIFVLAQWVSREKAGHSKSAEDYFLASKSLPWWAIGASLIAANI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCC SAEQIIGMAGSGYAIGLAIASYEWMAALTLLIVGKFFLPIFLRNGIYTMPQFLEQRYGTW CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IRTLMAVFWLLLYVFVNLTSILWLGSIAVSQVTGMDQTLALALIGVFALVYQLYGGLKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH ALTDIVQVTLLVLGGLLVAGLTLARIGDGAGVLAGFQHLWTAHPDHFHMILTRDNPFYKD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHC LPGLSVLLGGLWVMNISYWGFNQYIIQRALAAKNIGEAQKGMVFAAFLKLLMPLVIVVPG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IAAVVLAPDLAKPDQAYPTMMQLLPTGILGLVFAALVAAIVASLASKINSVATIFTLDFY HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKFRPQTEQKQLVRVGRLVAAASVLIGILTARPLLGNFDQGFQFIQEFTGFFTPGVVVIF HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCHHHHHHH MLGLFWKRANEAGALTAAIGSVVLSFALKFAWPELPFMDRIGVVFVAALVLAVVVSLLTP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ATQARDLIRTNDVAYGTTLGFKIGAAGVIAILIVLYTVFW CHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GLATLDIVIVLVYLAGIFVLAQWVSREKAGHSKSAEDYFLASKSLPWWAIGASLIAANI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCC SAEQIIGMAGSGYAIGLAIASYEWMAALTLLIVGKFFLPIFLRNGIYTMPQFLEQRYGTW CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IRTLMAVFWLLLYVFVNLTSILWLGSIAVSQVTGMDQTLALALIGVFALVYQLYGGLKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH ALTDIVQVTLLVLGGLLVAGLTLARIGDGAGVLAGFQHLWTAHPDHFHMILTRDNPFYKD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHC LPGLSVLLGGLWVMNISYWGFNQYIIQRALAAKNIGEAQKGMVFAAFLKLLMPLVIVVPG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IAAVVLAPDLAKPDQAYPTMMQLLPTGILGLVFAALVAAIVASLASKINSVATIFTLDFY HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKFRPQTEQKQLVRVGRLVAAASVLIGILTARPLLGNFDQGFQFIQEFTGFFTPGVVVIF HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCHHHHHHH MLGLFWKRANEAGALTAAIGSVVLSFALKFAWPELPFMDRIGVVFVAALVLAVVVSLLTP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ATQARDLIRTNDVAYGTTLGFKIGAAGVIAILIVLYTVFW CHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]