| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is panC [H]
Identifier: 21242531
GI number: 21242531
Start: 2055145
End: 2055987
Strand: Direct
Name: panC [H]
Synonym: XAC1786
Alternate gene names: 21242531
Gene position: 2055145-2055987 (Clockwise)
Preceding gene: 21242530
Following gene: 21242532
Centisome position: 39.71
GC content: 66.31
Gene sequence:
>843_bases ATGATCCAGACCCTGACCGATCTTTCCGCACTGCGCGCCCTGGTCAATGGCTGGAAGCGCGAGGGCTTGCGTGTGGCGCT GGTGCCTACCATGGGCAACCTGCACGCCGGGCATTATTCGTTGGTGATGCTGGCGCGCCAGTACGCCGACCGCGTAGTGT CCAGCGTGTTCGTCAACCCGACCCAGTTCGGCCCGAATGAAGATTTTGCGCGCTACCCGCGCACGCCCGAGGCCGACCTG CGCGGCCTGGAAGACGCCGGTTGCGATGCGCTGTGGCTGCCGGACGTGGACACCATGTACCCGCTCGGCACCGCGCTGGC CACACCGATCCACGCGCCCGGCGTCAGTGATGTGCTGGAAGGCGAATGCCGGCCCGGGCATTTCGATGGCGTGTGCACCG TGGTGGCGCGATTGTTCAACCAGGTGCAGCCGGACGTGGCCGCCTTCGGCAAGAAGGATTACCAGCAGTTGGCGGTGATC CGGCAGATGGTGGCCGACCTGGCGTTTCCGATCGAAATTTTGGGCGGCAGCATCGTGCGCGAGGCCGATGGCCTGGCGAT GAGCTCGCGCAACCAGTATCTGTCGGCGGAAGATCGCCCGATCTCGAGCACGATCCGCAAGGTGCTGCTGCAGATGCGCG ACAGCTATGCCGCCGGCACGCCGCGTGCGCAGGTGGAAGATGCGGCCAGCCACACGCTGGAACAGGCCGGTTTCCGGGTC GATTACGCGGTGGTGCGGCTGCCTGATCTCAGCGAGCCGGGCGACAGCCACGCCGGCGCGCGCGTGGCCTTGATCGCGGC CCGGTTGGGCAACACGCGCTTGATCGACAACCTGGAGTTCTGA
Upstream 100 bases:
>100_bases ATTTCCTGGCCGAAGGCGGCTCGGTTGCCGGCGCGGTGCGCGCCTATGCACAGGCGGTGCGCGACGGCAGTTTTCCCGAT GCAGAGCACGCGTACGCCGC
Downstream 100 bases:
>100_bases GCAGGCCGACGCGCCGTCGGAGCCGTCCGGCAGCGCCAGCGAACGGGGCGCGCGTTTGCGCGCGCTGCGCAGGCCTGAAG CCCTCACCACCGGCCGCAGC
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MIQTLTDLSALRALVNGWKREGLRVALVPTMGNLHAGHYSLVMLARQYADRVVSSVFVNPTQFGPNEDFARYPRTPEADL RGLEDAGCDALWLPDVDTMYPLGTALATPIHAPGVSDVLEGECRPGHFDGVCTVVARLFNQVQPDVAAFGKKDYQQLAVI RQMVADLAFPIEILGGSIVREADGLAMSSRNQYLSAEDRPISSTIRKVLLQMRDSYAAGTPRAQVEDAASHTLEQAGFRV DYAVVRLPDLSEPGDSHAGARVALIAARLGNTRLIDNLEF
Sequences:
>Translated_280_residues MIQTLTDLSALRALVNGWKREGLRVALVPTMGNLHAGHYSLVMLARQYADRVVSSVFVNPTQFGPNEDFARYPRTPEADL RGLEDAGCDALWLPDVDTMYPLGTALATPIHAPGVSDVLEGECRPGHFDGVCTVVARLFNQVQPDVAAFGKKDYQQLAVI RQMVADLAFPIEILGGSIVREADGLAMSSRNQYLSAEDRPISSTIRKVLLQMRDSYAAGTPRAQVEDAASHTLEQAGFRV DYAVVRLPDLSEPGDSHAGARVALIAARLGNTRLIDNLEF >Mature_280_residues MIQTLTDLSALRALVNGWKREGLRVALVPTMGNLHAGHYSLVMLARQYADRVVSSVFVNPTQFGPNEDFARYPRTPEADL RGLEDAGCDALWLPDVDTMYPLGTALATPIHAPGVSDVLEGECRPGHFDGVCTVVARLFNQVQPDVAAFGKKDYQQLAVI RQMVADLAFPIEILGGSIVREADGLAMSSRNQYLSAEDRPISSTIRKVLLQMRDSYAAGTPRAQVEDAASHTLEQAGFRV DYAVVRLPDLSEPGDSHAGARVALIAARLGNTRLIDNLEF
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=272, Percent_Identity=50.3676470588235, Blast_Score=246, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6322046, Length=248, Percent_Identity=37.0967741935484, Blast_Score=158, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 30473; Mature: 30473
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTLTDLSALRALVNGWKREGLRVALVPTMGNLHAGHYSLVMLARQYADRVVSSVFVNP CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC TQFGPNEDFARYPRTPEADLRGLEDAGCDALWLPDVDTMYPLGTALATPIHAPGVSDVLE CCCCCCCCHHHCCCCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHC GECRPGHFDGVCTVVARLFNQVQPDVAAFGKKDYQQLAVIRQMVADLAFPIEILGGSIVR CCCCCCCCHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EADGLAMSSRNQYLSAEDRPISSTIRKVLLQMRDSYAAGTPRAQVEDAASHTLEQAGFRV HHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE DYAVVRLPDLSEPGDSHAGARVALIAARLGNTRLIDNLEF EEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIQTLTDLSALRALVNGWKREGLRVALVPTMGNLHAGHYSLVMLARQYADRVVSSVFVNP CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC TQFGPNEDFARYPRTPEADLRGLEDAGCDALWLPDVDTMYPLGTALATPIHAPGVSDVLE CCCCCCCCHHHCCCCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHC GECRPGHFDGVCTVVARLFNQVQPDVAAFGKKDYQQLAVIRQMVADLAFPIEILGGSIVR CCCCCCCCHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EADGLAMSSRNQYLSAEDRPISSTIRKVLLQMRDSYAAGTPRAQVEDAASHTLEQAGFRV HHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE DYAVVRLPDLSEPGDSHAGARVALIAARLGNTRLIDNLEF EEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA