Click here to switch to the map view.

The map label for this gene is recA [H]

Identifier: 21242489

GI number: 21242489

Start: 1999890

End: 2000924

Strand: Direct

Name: recA [H]

Synonym: XAC1740

Alternate gene names: 21242489

Gene position: 1999890-2000924 (Clockwise)

Preceding gene: 21242488

Following gene: 21242490

Centisome position: 38.64

GC content: 61.74

Gene sequence:

>1035_bases
ATGGACGAGAACAAGAAGCGCGCCCTTTCCGCCGCACTGAGCCAGATCGAAAAGCAATTCGGCAAGGGCTCGGTCATGCG
CATGGGCGACCGCGTCATTGAGGCGGTCGAAGTCATCCCGACCGGCTCGCTGATGCTGGATATCGCCCTGGGGATCGGCG
GCCTGCCGAAGGGTCGCGTGGTCGAAATCTACGGCCCGGAATCCTCCGGCAAGACCACCTTGACCCTGCAAGCCATCGCC
GAGTGCCAGAAGAACGGCGGCACCGCTGCCTTCATCGATGCCGAGCACGCACTGGACCCGATTTATGCGGCCAAGCTGGG
CGTCAATGTCGACGACCTGCTGCTGTCGCAGCCGGATACCGGTGAGCAGGCACTGGAAATTGCCGACATGCTGGTGCGTT
CGGGTTCGGTTGATATCGTGGTGGTCGACTCGGTCGCTGCACTGACGCCGAAGGCGGAAATCGAAGGCGAGATGGGCGAC
CAGCTGCCAGGTTTGCAGGCTCGCTTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCAATATCAAGCGCTCCAACACGCT
GGTGGTCTTCATCAATCAGCTGCGCATGAAGATCGGCGTCATGATGCCGGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ACGCGCTGAAGTTCTACGCCTCGGTGCGTCTGGATATCCGCCGTATCGGTGCGATCAAGAAGGGCGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCGCCTCCGTTCAAGCAGGTCGTGACCGAAATCCTGTATGGCGA
AGGCATCAGTCGCGAGGGCGAATTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGACAAGGCCGGCGCCTGGTACAGCT
ATGGCGATGAGCGCATCGGGCAGGGCAAGGACAACGCGCGAACCTACCTGCGCGACAACTCGCAGGTTGCGACCCGGCTG
GAAGCGGAGCTGCGTGAGAAGTTCCAACCTGCCGAAGCACCGCGTGAAGCCGGCGACGACGAAGACAAGGAGTAA

Upstream 100 bases:

>100_bases
CCGCCTTCTTAATCTGAGTGTGTCGCCTGCGGTCTCAGCCTGTGCGATACACCGCCGCTACATTAGCCCCATACCGAAAT
CACTGACGAGGATCACCCAG

Downstream 100 bases:

>100_bases
GTTGCAGCTGCACAACATCACCATTCACCGGAGTTGGTTTGCCGGGAATTTATTTGCCGTGAGTTGGTGACGGTGATGCT
GTCGGTGAGCGGTTGGGGGA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNSQVATRL
EAELREKFQPAEAPREAGDDEDKE

Sequences:

>Translated_344_residues
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNSQVATRL
EAELREKFQPAEAPREAGDDEDKE
>Mature_344_residues
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNSQVATRL
EAELREKFQPAEAPREAGDDEDKE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=344, Percent_Identity=67.4418604651163, Blast_Score=472, Evalue=1e-134,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37167; Mature: 37167

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRV
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCE
VEIYGPESSGKTTLTLQAIAECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCCCHHHHHCCCCCC
GEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGN
CHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
IKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
CCCCCEEEEEEEHHHHHHEEECCCCCCCEECCCCEEEEEEEHHHHHHHHCCCCCCCHHHC
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIG
CCCEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEEHHCCCCCCCCCCHHCC
QGKDNARTYLRDNSQVATRLEAELREKFQPAEAPREAGDDEDKE
CCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRV
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCE
VEIYGPESSGKTTLTLQAIAECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCCCHHHHHCCCCCC
GEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGN
CHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
IKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
CCCCCEEEEEEEHHHHHHEEECCCCCCCEECCCCEEEEEEEHHHHHHHHCCCCCCCHHHC
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIG
CCCEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEEHHCCCCCCCCCCHHCC
QGKDNARTYLRDNSQVATRLEAELREKFQPAEAPREAGDDEDKE
CCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA