| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242452
Identifier: 21242452
GI number: 21242452
Start: 1961466
End: 1962524
Strand: Direct
Name: 21242452
Synonym: XAC1703
Alternate gene names: NA
Gene position: 1961466-1962524 (Clockwise)
Preceding gene: 21242449
Following gene: 21242453
Centisome position: 37.9
GC content: 66.57
Gene sequence:
>1059_bases ATGCCGCAGTCGGCTGCATGGGTGGAAGACACGCCGCTGAGCGATGGCTCCGCCGCCATCGCAACAGGGGCCGCAGTGGC GGCAGATCCGTTCGGCGAGCATCGCCCGAGGTGCTGGGGCGTGCGCCGGCAGATTCTCGGTGCGCTGTTCCATTTCCAGA GCGATAGCCAAGCACTGCTGGCGCTTGTCGATGCCGCCTACGCTGGGTTGCCCGCGCATCGGTTGCCGGGCGCTCCGGAA TTTCATGTCACGCTGGACCTGCTGCCGCGTGCGCCGGGCCGCACCGATGCAGAGCCGCCACCTGTGCGTACGCACGCCAG CGGCGGCCTGCTGTGCGGCATCATGGATGCCTGCAATTACCTGATGCTGTCGGTGCCGCAGCGCCGCGCGATGCTGGTGG TATCCGAGGACATGCTTGCCCACGCGTATCACGTGCGTTACGAACTGATCGAATTCGCCGTGTTCCTGCTGGCTGCGCGT GGGCTTGGGCTGGTGCCGTTGCATGGCGCGTGTGTGGGTCGACGCGGACGCAGCGTGTTACTGCTTGGCGCTAGCGGTGC GGGCAAATCGACCGTGGCCTTGCACAGCCTGTTGCATGGCCTGGACTTTGTCGCCGAAGACGGTGTCTTTGTGGCGCCCA ATAGCCTGCTCACCACCGGCGTGGCCAATTTCCTGCACCTGCGTGCCGAAACGCTGGGCCTGGTCGACCCGCCCACGCGC GCGTGGATCAGCGCATCGCCGGTGATCCGGCGCCGCAGCGGCGTGGAAAAATTCGAGGTCGATCTCCGCCATCGCCACGC GCATCTCGCACCCAAGCCCATGCAGTTGCGTGCGGTCGTGATGGTGTCCAGGTCGCCGGCCATCGCATCGGCACCGCACC TGGTCGCGGTGCCTGGCGAGCAAATCGCCGCCTACCTGGCCCAGGATCAACCGTACGCCGCCGGTCAGCCCGGCTGGCAG CGCTTTGTCGAACAGGTGCAGCGCATCGGCATGTTCACCTTGCACCGTGGCACGCATCCGCAGGCCTCGGTGGATGCGCT GCTGCAGCTGTTGCAATGA
Upstream 100 bases:
>100_bases CTTTGGTTGCGCCGCGTCGCATGCGGACACGGCTTGGGCGATGCAACCTTTCTGTGGAAAAGCAGCACACATCGGCTGAT TCAGCGCATCGGATGAAGGC
Downstream 100 bases:
>100_bases GGGGTTGTATGCAAGCGTCCCTGGACGCCACCGGCCCGCAGACCCTCGTCGCGCGCTGGCGCCTGCATGTTGCGCACGGA TGAGCGGCCGGCGATGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPQSAAWVEDTPLSDGSAAIATGAAVAADPFGEHRPRCWGVRRQILGALFHFQSDSQALLALVDAAYAGLPAHRLPGAPE FHVTLDLLPRAPGRTDAEPPPVRTHASGGLLCGIMDACNYLMLSVPQRRAMLVVSEDMLAHAYHVRYELIEFAVFLLAAR GLGLVPLHGACVGRRGRSVLLLGASGAGKSTVALHSLLHGLDFVAEDGVFVAPNSLLTTGVANFLHLRAETLGLVDPPTR AWISASPVIRRRSGVEKFEVDLRHRHAHLAPKPMQLRAVVMVSRSPAIASAPHLVAVPGEQIAAYLAQDQPYAAGQPGWQ RFVEQVQRIGMFTLHRGTHPQASVDALLQLLQ
Sequences:
>Translated_352_residues MPQSAAWVEDTPLSDGSAAIATGAAVAADPFGEHRPRCWGVRRQILGALFHFQSDSQALLALVDAAYAGLPAHRLPGAPE FHVTLDLLPRAPGRTDAEPPPVRTHASGGLLCGIMDACNYLMLSVPQRRAMLVVSEDMLAHAYHVRYELIEFAVFLLAAR GLGLVPLHGACVGRRGRSVLLLGASGAGKSTVALHSLLHGLDFVAEDGVFVAPNSLLTTGVANFLHLRAETLGLVDPPTR AWISASPVIRRRSGVEKFEVDLRHRHAHLAPKPMQLRAVVMVSRSPAIASAPHLVAVPGEQIAAYLAQDQPYAAGQPGWQ RFVEQVQRIGMFTLHRGTHPQASVDALLQLLQ >Mature_351_residues PQSAAWVEDTPLSDGSAAIATGAAVAADPFGEHRPRCWGVRRQILGALFHFQSDSQALLALVDAAYAGLPAHRLPGAPEF HVTLDLLPRAPGRTDAEPPPVRTHASGGLLCGIMDACNYLMLSVPQRRAMLVVSEDMLAHAYHVRYELIEFAVFLLAARG LGLVPLHGACVGRRGRSVLLLGASGAGKSTVALHSLLHGLDFVAEDGVFVAPNSLLTTGVANFLHLRAETLGLVDPPTRA WISASPVIRRRSGVEKFEVDLRHRHAHLAPKPMQLRAVVMVSRSPAIASAPHLVAVPGEQIAAYLAQDQPYAAGQPGWQR FVEQVQRIGMFTLHRGTHPQASVDALLQLLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37757; Mature: 37626
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSAAWVEDTPLSDGSAAIATGAAVAADPFGEHRPRCWGVRRQILGALFHFQSDSQALL CCCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH ALVDAAYAGLPAHRLPGAPEFHVTLDLLPRAPGRTDAEPPPVRTHASGGLLCGIMDACNY HHHHHHHHCCCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEHHHHHHH LMLSVPQRRAMLVVSEDMLAHAYHVRYELIEFAVFLLAARGLGLVPLHGACVGRRGRSVL HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCEEE LLGASGAGKSTVALHSLLHGLDFVAEDGVFVAPNSLLTTGVANFLHLRAETLGLVDPPTR EEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCH AWISASPVIRRRSGVEKFEVDLRHRHAHLAPKPMQLRAVVMVSRSPAIASAPHLVAVPGE HHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEECHH QIAAYLAQDQPYAAGQPGWQRFVEQVQRIGMFTLHRGTHPQASVDALLQLLQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHC >Mature Secondary Structure PQSAAWVEDTPLSDGSAAIATGAAVAADPFGEHRPRCWGVRRQILGALFHFQSDSQALL CCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH ALVDAAYAGLPAHRLPGAPEFHVTLDLLPRAPGRTDAEPPPVRTHASGGLLCGIMDACNY HHHHHHHHCCCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEHHHHHHH LMLSVPQRRAMLVVSEDMLAHAYHVRYELIEFAVFLLAARGLGLVPLHGACVGRRGRSVL HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCEEE LLGASGAGKSTVALHSLLHGLDFVAEDGVFVAPNSLLTTGVANFLHLRAETLGLVDPPTR EEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCH AWISASPVIRRRSGVEKFEVDLRHRHAHLAPKPMQLRAVVMVSRSPAIASAPHLVAVPGE HHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEECHH QIAAYLAQDQPYAAGQPGWQRFVEQVQRIGMFTLHRGTHPQASVDALLQLLQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA