| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242444
Identifier: 21242444
GI number: 21242444
Start: 1951757
End: 1952707
Strand: Direct
Name: 21242444
Synonym: XAC1695
Alternate gene names: NA
Gene position: 1951757-1952707 (Clockwise)
Preceding gene: 21242443
Following gene: 21242445
Centisome position: 37.71
GC content: 67.3
Gene sequence:
>951_bases ATGCCTGCACGGTGCTGCTGCCCAACCGGCTGTCCCCACATCCGTCTGCCGCGTGAGCGTGCAGCACGCCCCTTATCGCC CCGTTGTAGAGCCGCGCCCATGAATCAACACGACGAAATCTATCTGATCGACCTGTGGCGCATCCTGCGCCGGGAATGGC GCTGGGCAGTGGCAGCGCTGGTGGTGGTGCTTGGCCTGACCTTCGCTTTTACACGCCTGGCAAAACCGCAATGGGAGGCC ACCGCGTGGATCCAGGTTGGCGAAATCGGCCCGACCCCTGCTGGCCGCGACCCCAAGGTCGAACCGTTCCAGCGGGTGAT CGATCGCATGAAAACGCGGCTGTTTCAGGATGCGGTGTTGCGTCGGGCGCAGGTGCCGCTCAATAGCCGCGCCGCGCAGC TGTATCGCGGTAGCCTGAAGCCGGACCCCGACCCGTACGCCAATCTGATCGGTGTGACTATCCGCGCGGAATCGGCGCAG CAAGCGCGCACGCTGGCCATGGCCACCGTGAGCCAACTGCAGACGCTGCACGGCGACACCCATGCAGCTGCGCTCGATCT TACGCGCGCCCGCCTGCAAGGCTTGAGCGAGGATCTGCGCGCGGCCACCACCAACCGCGAGCAGCTACAGCGGCAGTTGC AGGCCGGGCACGGGGCGTCTTCCGCCACGCCAACGCAGGTACTGGCGGGCGTGTTGCTCACCGACAGCAACACCACCATT CGCGCCTTGAAGAGCGAGCGCGACGACCTCGTTGCCCGCCTCACCGCGCGCTACACCTACCAGACCTCGCTGGCGTGGCC GCTGTACGTGCCCGACCGCCAGGCGTTTCCAAATGCGGTCACCGCCTGGGCGGCCGGCATGCTGGCCGGGGCGGGACTGG GCGTATTGGTCGCCGTGCTGCGCAATGCGGTGCGCCGTCGCGCGCGGACTCCTGCACACGCTGGTGCATGA
Upstream 100 bases:
>100_bases ATCTTCCTGCGCATCGCCTATGCCTGCCTGATGTCGCCCTTCGCGCCACAGGCGTTCACCTGGACCAACTTCGGCTTCGT CGCGCTGTGCCTGGTGCTGC
Downstream 100 bases:
>100_bases CGGTTGCCGTGGGCAACGGCGCATGCAGGGGGGATTGAGTTTGCGCAAGCAGCAGGCCCCAGGCGATACGAGAGCGAACG CCGGGCCGTATATCGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPARCCCPTGCPHIRLPRERAARPLSPRCRAAPMNQHDEIYLIDLWRILRREWRWAVAALVVVLGLTFAFTRLAKPQWEA TAWIQVGEIGPTPAGRDPKVEPFQRVIDRMKTRLFQDAVLRRAQVPLNSRAAQLYRGSLKPDPDPYANLIGVTIRAESAQ QARTLAMATVSQLQTLHGDTHAAALDLTRARLQGLSEDLRAATTNREQLQRQLQAGHGASSATPTQVLAGVLLTDSNTTI RALKSERDDLVARLTARYTYQTSLAWPLYVPDRQAFPNAVTAWAAGMLAGAGLGVLVAVLRNAVRRRARTPAHAGA
Sequences:
>Translated_316_residues MPARCCCPTGCPHIRLPRERAARPLSPRCRAAPMNQHDEIYLIDLWRILRREWRWAVAALVVVLGLTFAFTRLAKPQWEA TAWIQVGEIGPTPAGRDPKVEPFQRVIDRMKTRLFQDAVLRRAQVPLNSRAAQLYRGSLKPDPDPYANLIGVTIRAESAQ QARTLAMATVSQLQTLHGDTHAAALDLTRARLQGLSEDLRAATTNREQLQRQLQAGHGASSATPTQVLAGVLLTDSNTTI RALKSERDDLVARLTARYTYQTSLAWPLYVPDRQAFPNAVTAWAAGMLAGAGLGVLVAVLRNAVRRRARTPAHAGA >Mature_315_residues PARCCCPTGCPHIRLPRERAARPLSPRCRAAPMNQHDEIYLIDLWRILRREWRWAVAALVVVLGLTFAFTRLAKPQWEAT AWIQVGEIGPTPAGRDPKVEPFQRVIDRMKTRLFQDAVLRRAQVPLNSRAAQLYRGSLKPDPDPYANLIGVTIRAESAQQ ARTLAMATVSQLQTLHGDTHAAALDLTRARLQGLSEDLRAATTNREQLQRQLQAGHGASSATPTQVLAGVLLTDSNTTIR ALKSERDDLVARLTARYTYQTSLAWPLYVPDRQAFPNAVTAWAAGMLAGAGLGVLVAVLRNAVRRRARTPAHAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34836; Mature: 34704
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: PS00648 RIBONUCLEASE_P
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARCCCPTGCPHIRLPRERAARPLSPRCRAAPMNQHDEIYLIDLWRILRREWRWAVAAL CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH VVVLGLTFAFTRLAKPQWEATAWIQVGEIGPTPAGRDPKVEPFQRVIDRMKTRLFQDAVL HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RRAQVPLNSRAAQLYRGSLKPDPDPYANLIGVTIRAESAQQARTLAMATVSQLQTLHGDT HHHCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCH HAAALDLTRARLQGLSEDLRAATTNREQLQRQLQAGHGASSATPTQVLAGVLLTDSNTTI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCHH RALKSERDDLVARLTARYTYQTSLAWPLYVPDRQAFPNAVTAWAAGMLAGAGLGVLVAVL HHHHHHHHHHHHHHHHHHEEECCCEEEEECCCHHHCCHHHHHHHHHHHHHCHHHHHHHHH RNAVRRRARTPAHAGA HHHHHHHHCCCCCCCC >Mature Secondary Structure PARCCCPTGCPHIRLPRERAARPLSPRCRAAPMNQHDEIYLIDLWRILRREWRWAVAAL CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH VVVLGLTFAFTRLAKPQWEATAWIQVGEIGPTPAGRDPKVEPFQRVIDRMKTRLFQDAVL HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RRAQVPLNSRAAQLYRGSLKPDPDPYANLIGVTIRAESAQQARTLAMATVSQLQTLHGDT HHHCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCH HAAALDLTRARLQGLSEDLRAATTNREQLQRQLQAGHGASSATPTQVLAGVLLTDSNTTI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCHH RALKSERDDLVARLTARYTYQTSLAWPLYVPDRQAFPNAVTAWAAGMLAGAGLGVLVAVL HHHHHHHHHHHHHHHHHHEEECCCEEEEECCCHHHCCHHHHHHHHHHHHHCHHHHHHHHH RNAVRRRARTPAHAGA HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA