| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242382
Identifier: 21242382
GI number: 21242382
Start: 1881649
End: 1882218
Strand: Direct
Name: 21242382
Synonym: XAC1632
Alternate gene names: NA
Gene position: 1881649-1882218 (Clockwise)
Preceding gene: 21242381
Following gene: 21242383
Centisome position: 36.36
GC content: 64.91
Gene sequence:
>570_bases TTGACATCTGCAACGCAGTGTCTTCATGCGTTCGCCGCAAAGATCGCGACTCTTTCACTGACACGGGTCGAAGGTTGTGG GCGGTGCGGCGGCGTTGCGTCGCCGCCGAGTCGAAGAGGAACAACGGATGACGATTCTGGATCGTCCTGCCGGTCGCGGC CATTGGGCGCTGGCGACCTTGGGAGGCGTGATTGCACTACTGGGCGCGGTGCTGCTTGCCGGTGGCGTGTGGCTGGCTGC GTTGGGCGGCTCCTGGTATTACGCACCGGCCGGTGCGGCGATGCTCGTTGCCGGCGTGCTGCTGTTTCGTGGCCGCAATG CGGGCGCCTGGTGGTTTGCCGGCGTGGTGGCGGTTTCGTTGCTGTGGACGTGGTGGGAATCAGGCAGCGATTACTGGCGC TGGGTGCCGCGTCTGGGCCTGATTGTCGGCCTGGCATTGGTGCTCGCCTTGCTATTGCCGAAATTGCAGCGCCCCGTGTC GCGCACGGTATCGCGCAGCCTGGCCGGTGCGCTGGCGGTGGTATTTGTGGTGGCGTTCGCATTGGCGTTCATGCCGCATG GCGTGACTGA
Upstream 100 bases:
>100_bases ATTGCAGCGCTAACGCGACGCAGTTGACCAAAAACGCCGGTGAAAACCGGCGTTTTTTATTGCGCGAAGTTTTTTGGATC GCCACGCTTTATGGCGGGCG
Downstream 100 bases:
>100_bases AGCCGATCGCGCTGGCGCATGCGGCAGGCGTGCTCGGGGGCCTGGTCACCCGCGACACATCCGCCCCGGTTGCGGCGTCT GGCGCGCAGCCGGCGAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTSATQCLHAFAAKIATLSLTRVEGCGRCGGVASPPSRRGTTDDDSGSSCRSRPLGAGDLGRRDCTTGRGAACRWRVAGC VGRLLVLRTGRCGDARCRRAAVSWPQCGRLVVCRRGGGFVAVDVVGIRQRLLALGAASGPDCRPGIGARLAIAEIAAPRV AHGIAQPGRCAGGGICGGVRIGVHAAWRD
Sequences:
>Translated_189_residues MTSATQCLHAFAAKIATLSLTRVEGCGRCGGVASPPSRRGTTDDDSGSSCRSRPLGAGDLGRRDCTTGRGAACRWRVAGC VGRLLVLRTGRCGDARCRRAAVSWPQCGRLVVCRRGGGFVAVDVVGIRQRLLALGAASGPDCRPGIGARLAIAEIAAPRV AHGIAQPGRCAGGGICGGVRIGVHAAWRD >Mature_188_residues TSATQCLHAFAAKIATLSLTRVEGCGRCGGVASPPSRRGTTDDDSGSSCRSRPLGAGDLGRRDCTTGRGAACRWRVAGCV GRLLVLRTGRCGDARCRRAAVSWPQCGRLVVCRRGGGFVAVDVVGIRQRLLALGAASGPDCRPGIGARLAIAEIAAPRVA HGIAQPGRCAGGGICGGVRIGVHAAWRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19332; Mature: 19200
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSATQCLHAFAAKIATLSLTRVEGCGRCGGVASPPSRRGTTDDDSGSSCRSRPLGAGDL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC GRRDCTTGRGAACRWRVAGCVGRLLVLRTGRCGDARCRRAAVSWPQCGRLVVCRRGGGFV CCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEE AVDVVGIRQRLLALGAASGPDCRPGIGARLAIAEIAAPRVAHGIAQPGRCAGGGICGGVR EEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE IGVHAAWRD EEEEEECCC >Mature Secondary Structure TSATQCLHAFAAKIATLSLTRVEGCGRCGGVASPPSRRGTTDDDSGSSCRSRPLGAGDL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC GRRDCTTGRGAACRWRVAGCVGRLLVLRTGRCGDARCRRAAVSWPQCGRLVVCRRGGGFV CCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEE AVDVVGIRQRLLALGAASGPDCRPGIGARLAIAEIAAPRVAHGIAQPGRCAGGGICGGVR EEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE IGVHAAWRD EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA