| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242357
Identifier: 21242357
GI number: 21242357
Start: 1855134
End: 1855751
Strand: Direct
Name: 21242357
Synonym: XAC1607
Alternate gene names: NA
Gene position: 1855134-1855751 (Clockwise)
Preceding gene: 21242356
Following gene: 21242358
Centisome position: 35.84
GC content: 61.17
Gene sequence:
>618_bases ATGAGCGATATCGTCAACATGTCCGACCAATTCAAGGGCCTGCCGATGGCAGACCTGATCGGCGCCCCGTTGCGTGCAGC CTGCGATGCGCAGGTCATGCTGGCACGGGCCACCGCCGACTTCATCAAGGTCATCGGCTTTCTGCCGCCGACCGACCCTG CCGACCCCAACGGGAACGGCGGCACGCGCACCGCGCAGTTCAAATTCAAGCGCCCGGTCGAGGACCCTAGCGGTACCGGG ATGGCTGAGGAGGAAGTCGAGATCGTTGTACCGTTGTTGACCCTTGTCAACGTACCCAACCTGAGCATTCAGACCGTGGA CGTGACCTTCGATATGGAAGTCAAATCCTCGTTCTCGGAAAAGGAAGCCGAAGACAAGAGCCTCAAGGTGGATCTGGAGG CCAGCGTCGGCTGGGGCGTCTTCAAGGCCAAGGTCAACGTGCAGGGCTCCGTGTCAAGTCATAAGGAAAATACCCGCTCT TCGGATAACTCGGCCAAGTATCACGTCGCGCTGCACGCCGAAGATCGCGGCACGCCCGAAGGCCTGTCGCGTGTGCTCGA CATCTTGCAGACCGCTGCGGCCCCACGCAAAGTCACCGCGCCTGTGCCGGTGCCGTAA
Upstream 100 bases:
>100_bases TCGCCTTGCGCAGTCGCAAGGTGTGTTCAAAACGGTCAAGGGAGAGTAGCTCCCGCCGTCATCGTTTTCTTCATAAACAA CCACTCTTCAGGAGAACACC
Downstream 100 bases:
>100_bases GCGTCGCTGTTGCGTCCCGTACTTTTCCCTCACCCGAGTCTTTGCCGATGATTGATTTGTCAGAAGTCAGTTACATCAAG CGCATCGTCGTCGGCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSDIVNMSDQFKGLPMADLIGAPLRAACDAQVMLARATADFIKVIGFLPPTDPADPNGNGGTRTAQFKFKRPVEDPSGTG MAEEEVEIVVPLLTLVNVPNLSIQTVDVTFDMEVKSSFSEKEAEDKSLKVDLEASVGWGVFKAKVNVQGSVSSHKENTRS SDNSAKYHVALHAEDRGTPEGLSRVLDILQTAAAPRKVTAPVPVP
Sequences:
>Translated_205_residues MSDIVNMSDQFKGLPMADLIGAPLRAACDAQVMLARATADFIKVIGFLPPTDPADPNGNGGTRTAQFKFKRPVEDPSGTG MAEEEVEIVVPLLTLVNVPNLSIQTVDVTFDMEVKSSFSEKEAEDKSLKVDLEASVGWGVFKAKVNVQGSVSSHKENTRS SDNSAKYHVALHAEDRGTPEGLSRVLDILQTAAAPRKVTAPVPVP >Mature_204_residues SDIVNMSDQFKGLPMADLIGAPLRAACDAQVMLARATADFIKVIGFLPPTDPADPNGNGGTRTAQFKFKRPVEDPSGTGM AEEEVEIVVPLLTLVNVPNLSIQTVDVTFDMEVKSSFSEKEAEDKSLKVDLEASVGWGVFKAKVNVQGSVSSHKENTRSS DNSAKYHVALHAEDRGTPEGLSRVLDILQTAAAPRKVTAPVPVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21916; Mature: 21785
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIVNMSDQFKGLPMADLIGAPLRAACDAQVMLARATADFIKVIGFLPPTDPADPNGNG CCCCCCCHHHHCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTRTAQFKFKRPVEDPSGTGMAEEEVEIVVPLLTLVNVPNLSIQTVDVTFDMEVKSSFSE CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCCH KEAEDKSLKVDLEASVGWGVFKAKVNVQGSVSSHKENTRSSDNSAKYHVALHAEDRGTPE HCCCCCEEEEEEECCCCCEEEEEEEEECCCCHHCCCCCCCCCCCCEEEEEEEECCCCCHH GLSRVLDILQTAAAPRKVTAPVPVP HHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SDIVNMSDQFKGLPMADLIGAPLRAACDAQVMLARATADFIKVIGFLPPTDPADPNGNG CCCCCCHHHHCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTRTAQFKFKRPVEDPSGTGMAEEEVEIVVPLLTLVNVPNLSIQTVDVTFDMEVKSSFSE CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCCH KEAEDKSLKVDLEASVGWGVFKAKVNVQGSVSSHKENTRSSDNSAKYHVALHAEDRGTPE HCCCCCEEEEEEECCCCCEEEEEEEEECCCCHHCCCCCCCCCCCCEEEEEEEECCCCCHH GLSRVLDILQTAAAPRKVTAPVPVP HHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]